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Alexa fluor 488 anti mouse igg

Manufactured by Thermo Fisher Scientific
Sourced in United States, United Kingdom, Italy, Japan

Alexa Fluor 488 anti-mouse IgG is a fluorescently-labeled secondary antibody that specifically binds to mouse immunoglobulin G (IgG). It is designed for use in various immunological techniques, such as flow cytometry, immunofluorescence microscopy, and Western blotting, to detect and visualize mouse primary antibodies.

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218 protocols using alexa fluor 488 anti mouse igg

1

Immunofluorescent Labeling of Mouse Brain

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Brains from 1-month-old mice were perfused with phosphate-buffered 4% paraformaldehyde (PFA) followed by extraction of the brain, embedded in OTC freezing solution and sectioned sequentially from the olfactory bulb lobule towards the cerebellum. Cross-sections were labelled with primary antibodies followed by incubation with Cy3-conjugated secondary antibody (Jackson ImmunoResearch) and Alexa Fluor 488 anti-mouse IgG (Invitrogen). Culture cells were fixed in 3% paraformaldehyde and immunostained with primary antibodies. Cy3 anti-rabbit IgG (Jackson Laboratories) and Alexa Fluor 488 anti-mouse IgG (Invitrogen) were used as secondary antibodies before confocal microscopy imaging. Images were acquired on a Nikon C1si confocal microscope, with a Plan Apo × 40, numerical aperture (NA) 1.3 and/or Plan Apo × 60, NA 1.45 objective (Melville, NY).
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2

Cell Cycle Analysis by Flow Cytometry

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Cell cycle analysis was performed using flow cytometry based on DNA content and incorporation of 5-bromo-2-deoxyuridine (BrdU)80 (link). BrdU (Sigma) was added to cell cultures at 10 μM at 37 °C for 1 h. After pulse labelling, the cells were collected as a cell suspension by trypsinization. Cells were fixed with 90% ice-cold ethanol with gentle vortexing and incubated on ice for 1 h. Cells were rinsed in PBS and further incubated with 2 N HCl/0.5% Triton X-100 at RT for 30 min. After that, cells were suspended in 0.1 M sodium tetraborate for 30 min. Cells were incubated with 1/50 diluted anti-BrdU mouse IgG (555627, BD Pharmingen) at RT for 1 h and reacted with 1/500 diluted Alexa Fluor 488 anti-mouse IgG (Molecular Probes, A-11001) for 30 min after two washes with PBS. Cells were finally incubated with PBS containing 10 μg ml−1 RNase (Sigma) and 5 μg ml−1 propidium iodide (Dojindo) at RT for 30 min in the dark and then filtered through 77-μm nylon mesh to remove cell clusters. Cells were analysed by flow cytometry using BD FACSVerse (BD Bioscience). At least 10,000 events were collected and data were analysed using FlowJo software (Tree Star Inc.).
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3

Immunofluorescence Staining of Neuron Cultures

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To evaluate the morphology and neurite outgrowth, cell cultures and explants were fixed with 4% paraformaldehyde for 20 minutes. After rinsing with phosphate buffered saline (PBS pH 7.2), the cells were incubated in 0.1% triton X-100, 10% normal goat serum (NGS, Thermo Scientific, Bedford, MA, USA)/0.1% NaN3, for 1 hour. Samples were incubated for 1 hour at room temperature in primary antibodies and processed for single or double immunofluorescence. The primary antibodies used in this study were: mouse monoclonal anti-βIII Tubulin (1:1000, Thermo Scientific), rabbit polyclonal anti-S-100 (1:600, Abcam, Cambridge, MA, USA) and rabbit polyclonal anti-Peripherin (1:1000, Millipore, Temecula, CA, USA). After rinsing with PBS, the specimens were incubated for 1 hour at room temperature with secondary antibodies Alexa Fluor 488 anti-mouse IgG (1:200, Molecular Probes, Eugene, Oregon, USA) and Cy3 anti-rabbit IgG (1:200, Jackson Immunoresearch, West Grove, PA, USA). Finally, samples were mounted with a fluorescent mounting medium (Dako, carpinteria, CA, USA), imaged using the Nikon Eclipse Ti A1R confocal microscope (Nikon, Melville, NY, USA), and analyzed using the NIS-Elements software (Nikon).
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4

Immunostaining of Astrocytic Markers

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WT- and 3Tg-iAstro cells, grown on 13 mm glass coverslips, were fixed in 4% formaldehyde, permeabilized (7 min in 0.1% Triton X-100 in phosphate-buffered saline (PBS)) and immunoprobed with an appropriate primary antibody (diluted in PBS supplemented with 1% gelatin) for 1 h at 37 °C. After 3 times washing in PBS, an Alexa-conjugated secondary antibody (1:300 in PBS supplemented with 1% gelatin) was applied for 1 h at room temperature (RT). The following primary antibodies were used: AQP4 (Alomone Labs, Cat. No. 249-323), Aldh1l1 (Abcam, Cat. No. Ab190298), GS (Abcam, Cat. No. Ab73593), GFAP (Chemicon International, Cat. No. CBL411) and GLT-1 (Alomone labs, Cat. No. AGC-022). Secondary antibodies were as follows: Alexa Fluor 488 anti-mouse IgG, Alexa Fluor 555 anti-rabbit IgG (all secondary antibodies were from Molecular Probes, Life Technologies, Monza, Italy). Nuclei were counter-stained with 4′,6-diamidino-2-phenylindole (DAPI). Images were acquired by Zeiss 710 confocal laser scanning microscope equipped with EC Plan-Neofluar 40×/1.30 Oil DIC M27 objective and Zen software.
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5

Immunofluorescent Staining of Mouse Sera

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Mouse sera were diluted to 1:40 (SHP-1flox/flox) or 1:100 (mb1cre x SHP-1flox/flox) in PBS and incubated on HEp-2 cell slides (BION) for 1 h at room temperature. The slides were then washed in PBS, stained with Alexa Fluor 488 anti–mouse IgG (Molecular Probes) for 1 h at room temperature, washed, and mounted in Fluoromount G (SouthernBiotech). The slides were analyzed using a Leica DMRXA microscope (ZEISS) under a 10× objective and further analyzed using Slidebook software.
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6

Comprehensive Immunofluorescence Profiling of Neural Cell Markers

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Cells were fixed with 4% paraformaldehyde (PFA) in PBS, permeabilized and blocked with 0.1% Triton-X100 plus and 5% normal goat serum in PBS. Then, they were incubated overnight at 4°C with the following primary antibodies: mouse anti-DLX2, 1:500 (Santa Cruz), rabbit anti-GABA, 1:1000 (Sigma), rabbit anti-GAD65/67, 1:250 (Millipore), mouse anti-GFAP, 1:200 (Millipore), mouse anti-MAP2, 1:200 (Chemicon), rabbit anti-MAP2, 1:1000 (Millipore), mouse anti-nestin, 1:200 (Chemicon), mouse anti-NeuN, 1:500 (Millipore), rabbit anti-neurofilament M, 1:200 (Millipore), mouse anti-NKX2.1, 1:1000 (Millipore), rabbit anti-OLIG2, 1:1000 (a gift from Dr. Charles Stiles, Harvard Medical School), mouse anti-PAX6, 1:250 (Millipore), mouse anti-PSD95, 1:500 (Millipore), rabbit anti-S100, 1:250 (Dako), mouse anti-SOX2, 1:500 (Millipore), rabbit anti-synaptophysin, 1:250 (Sigma), rabbit anti-TuJ1, 1:1000 (BioLegend) and mouse anti-vGAT, 1:200 (Synaptic Systems). After washing with PBS, cells were incubated with the secondary antibodies, Alexa Fluor® 555 anti-mouse IgG (Molecular Probes) and Alexa Fluor® 488 anti-mouse IgG (Molecular Probes). Cells were then counter-stained with 4,6-diamidino-2-phenylindole (DAPI) (Santa Cruz). The images were captured using a confocal laser-scanning microscope (LSM700; Zeiss) and digital inverted fluorescence microscope (DM5000B; Leica).
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7

Quantifying DNA Damage Response

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Both CRC cell lines were transfected with JMJD2B siRNA or negative control siRNA for 48 h, and then treated with DMSO or 50 μmol l−1 etoposide (Sigma-Aldrich, St Louis, MO, USA) for 24 h. Cells were fixed with 4% paraformaldehyde, blocked with 1% bovine serum albumin and 0.2% Triton X-100, and then incubated with an anti-phosphorylated histone H2AX (γH2AX) monoclonal antibody (Ser139, 1 : 200; Millipore, Billerica, MA, USA) and anti-H3K9me3 polyclonal antibody (1 : 300; Abcam, Cambridge, UK). Subsequently, the cells were incubated with Alexa Fluor 488 anti-mouse IgG and Alexa Fluor 594 anti-rabbit IgG (1 : 500; Molecular Probes, Eugene, OR, USA), respectively. Nuclei were stained with 4′,6-diamidino-2-phenylindole (DAPI; SouthernBiotech, Birmingham, AL, USA). The stained cells were observed under a fluorescent microscope (LSM-710, Zeiss, Jena, Germany).
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8

Immunophenotyping of HIV-infected Cells

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TRAP staining was carried out with TRAP-staining kit (Primary Cell Co.). For immunostaining, cells were fixed with 4% paraformaldehyde. Then, cells were permeabilized and blocked with PBS containing 2% bovine serum albumin (BSA) and 0.01% Tween 20, and incubated with anti-HIV p24 antibody (clone Kal-1; Dakocytomation) and anti-TRAP antibody (Santa Cruz). After being washed, cells were further incubated with Alexa Fluor 488 anti-mouse IgG (Molecular Probes), Alexa Fluor 546 anti-rabbit IgG (Molecular Probes), and Hoechst33258 (Molecular Probes). The images of fluorescence were acquired by fluorescent microscopy using a BZ-8000 (Keyence). For flow cytometry, cells were harvested with 10 mM EDTA/PBS. After preincubation with a human Fc receptor blocking reagent (MBL), cells were stained with the corresponding antibodies. Fluorescence was analyzed with a FACSCalibur (Becton Dickinson). The following antibodies were used for staining: fluorescein isothiocyanate (FITC) -labeled anti CD4, CD184/CXCR4, CD195/CCR5, CD14, and CD71. In addition, the following isotype controls were used as negative controls for staining for each receptor: FITC-labeled mouse IgG1 for CD4, FITC-labeled rat IgG1 for CXCR4, and FITC-labeled rat IgG2a for CCR5. All of the antibodies except for CD14 and CD71 (Miltenyi Biotech) were obtained from MBL.
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9

Immunofluorescence Analysis of TNF-α Response

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One day before TNF-α treatment, HeLa cells were seeded onto glass cover slips. Cells were then treated with 30 ng/ml TNF-α for 1 h, followed by fixation with 4% formaldehyde and 4% sucrose for 20 min at 4 °C. After washing twice with phosphate-buffered saline (PBS), the fixed cells were permeabilized with PBS containing 0.2% Triton X-100 at 4 °C for 15 min. Permeabilized cells were washed three times with PBS and then incubated with PBS-BG (PBS containing 0.1% bovine albumin serum and 3% fetal bovine serum) for 1 h at room temperature. Cells were incubated with the indicated primary antibody diluted in PBS-BG overnight at 4 °C. After washing with PBS, cells were incubated with Alexa Fluor 488 anti-mouse IgG, Alexa Fluor 546 anti-rabbit IgG, or Alexa Fluor 488 anti-goat IgG (1 : 1000 dilution; Molecular Probes, Eugene, OR, USA) diluted in PBS-BG for 2 h at room temperature. Finally, cells were mounted in a solution containing DAPI (Vectashield, Vector Laboratories, Inc., Burlingame, CA, USA) and observed with a laser confocal microscope (Carl Zeiss, Thornwood, NY, USA).
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10

Immunohistochemical Evaluation of Gastric Cells

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Gastric specimens were sectioned at a thickness of 3 μm and used for immunohistochemistry as described previously.25 (link),26 (link) Primary antisera were diluted in phosphate-buffered saline (PBS) and incubated overnight at 4°C. The next day, slides were washed in PBS and incubated with secondary antibody at 37°C for 30 minutes. Cy3 Donkey Anti-Goat IgG, Cy3 Donkey Anti-Rabbit IgG, Alexa Fluor 488 Anti-Rabbit IgG, and Alexa Fluor 488 Anti-Mouse IgG (Molecular Probes Inc., Eugene, OR, USA) were used as the secondary antibodies.
The panel of primary antisera included anti-COX-2 antibody (sc-1747: dilution of 1:200, goat polyclonal; Santa Cruz Biotechnology, Santa Cruz, CA, USA), anti-DCAMKL1 antibody (dilution of 1:30, rabbit polyclonal; Abgent, San Diego, CA, USA), anti-proliferating cell nuclear antigen (PCNA) antibody (dilution of 1:2,000, mouse monoclonal; Sigma-Aldrich, St. Louis, MO, USA), and anti-Sox9 antibody (dilution of 1:1,000, rabbit polyclonal; Millipore, Temecula, CA, USA).
The number of positive stained cells for COX-2 or DCAMKL1 was counted in five microscopic fields and then the mean value was calculated.
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