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17 protocols using mueller hinton broth (mhb)

1

Bacterial Strain Cultivation and Maintenance

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Bacterial strains were kept on Mueller-Hinton agar (Formedium, Nutrient Agar, Hunstanton, Norfolk, United Kingdom; Biolife, Mueller Hinton Broth, Milan, Italy) at 4 °C and were transferred to fresh agar plates monthly. Liquid cultures in Mueller-Hinton broth (Biolife, Mueller Hinton Broth, Milan, Italy) were grown overnight at 37 °C with aeration (180 rpm). Before use, overnight cultures were diluted 500-fold and grown at 37 °C on Mueller-Hinton agar or in Mueller-Hinton broth without shaking.
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2

Antimicrobial Activity Assay Protocols

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Test media were prepared as follow:

Agar-well diffusion test medium; deionized water (containing agar 13%), meat extract (3%), sodium chloride (10%), glucose (4%), dibasic potassium phosphate (1%) and meat peptone (5%); after preparation, the test medium was autoclaved.

Brain Heart Infusion (BHI) Broth; deionized water, BHI (3.7%, Biolife Italiana Srl, Milano, Italy).

Mueller Hinton Broth with 5% Blood; deionized water, Mueller Hinton Broth (2.2%, Biolife Italiana Srl, Italy), Horse Lysate Blood (5%, Allevamenti Blood di Fiastra Maddalena).

5% Sheep Blood Agar; deionized water, Columbia Agar Base (4.4%, Microbiol Srl, Macchiareddu, Cagliari, Italy), Defibrinated Sheep Blood (5%, Allevamenti Blood di Fiastra Maddalena). Bacterial suspension at concentrations of 1 × 105 CFU/mL was used for the antimicrobial test.

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3

Bacterial Growth Curve Determination

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The standard growth curve was determined for each bacterial strain by plotting the A600 value with the number of colony-forming units in milliliter (CFU/mL).
The overnight bacterial culture was diluted (1:10, v/v) in Mueller-Hinton broth (MHB; Biolife) and incubated at 220 rpm at 37 °C until the mid-exponential growth phase was reached (A600 = 0.34–0.65). Then, 10-fold serial dilutions of the bacterial culture were prepared and 50 µL of each dilution was plated on Mueller-Hinton agar plates after measuring A600. The dilution plate on which 30–100 colonies grew was used to calculate CFU/mL. The optical density of a culture was measured using a spectrophotometer (Perkin Elmer Lambda Bio 40) and a densitometer (BioSan, DEN-1) relative to a blank sample of the medium. Listeria monocytogenes ATCC 7644 and Enterococcus faecalis ATCC 29212 were cultured on nutrient media containing 0.5% peptone, 0.3% yeast extract, 0.5% NaCl, and 1.5% agar. These two strains were cultured at 220 rpm and 35 °C.
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4

Microbial Transport and Cultivation Protocols

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The following media were used throughout this study: viability-maintaining microbiostatic medium, anaerobically prepared (VMGA III) transport medium (Doan et al. 1999 (link)), tryptone soya serum bacitracin vancomycin agar (TSBV, HiMedia Laboratories, India) (Slots 1982 (link)), tryptone soya broth (TSB, Biolife, Italy), tryptone soya agar (TSA, Biolife, Italy), Müller–Hinton broth (MHB, Biolife, Italy) and Müller–Hinton agar (MHA, Biolife, Italy). All chemicals used in this work were of analytical grade (HiMedia Laboratories, India). CEO was purchased from Frey & Lau GmbH, Henstedt-Ulzburg, Germany.
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5

Artificial Mucus Composition for Antimicrobial Evaluation

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N-acetylcysteine (NAC), bromelain, ascorbic acid, Ribes nigrum, resveratrol, and pelargonium were kindly donated by Anvest Health s.r.l. (Castel San Giorgio, Salerno, Italy). Deoxyribonucleic acid (DNA), mucin from the porcine stomach, diethylenetriaminepentaacetic acid (DTPA), RPMI 1640 amino acids solution, egg yolk emulsion, sodium chloride, and potassium chloride, used for artificial mucus preparation, and barbital buffer were purchased from Sigma-Aldrich (Milan, Italy), while the hydroxyethylcellulose was obtained from A.C.E.F. SpA (Piacenza, Italy). Mueller–Hinton broth (MHB) and Mueller–Hinton agar (MHA) were acquired from Biolife (Milan, Italy); trypticase soy broth (TSB) was obtained from Difco Laboratories, and phosphate-buffered saline (PBS) from GIBCO, Thermo Fisher Scientific. All other solvents and chemicals were of analytical grade.
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6

Antimicrobial Susceptibility Evaluation

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Standardized inoculum of Staphylococcus aureus ATCC 29213, S. aureus 393, Pseudomonas aeruginosa L2, and P. aeruginosa L4L were used for the experiments. The strains were plated on Mueller Hinton Agar (Biolife Italiana srl, Milano, Italy) and incubated at 37 °C for 19 h. Pure colonies were suspended in 10 mL Mueller Hinton Broth (MHB, Biolife Italiana srl, Milano, Italy) and diluted until the concentration was 5.0 Log10 colony forming unit/mL (CFU/mL). The microbroth dilution technique of antimicrobial susceptibility was performed to test the inhibitory effect of the formulations on the bacterial growth in comparison to controls. Dilutions were carried out using sterile deionized water in 96-well flat-bottom microtiter plates and were incubated with standardized inoculum (100 mL). Control experiments on bacteria were carried out by simple addition of sterile deionized water. The microtiter assays were incubated at 37 °C and the optical density (OD600), namely the UV-vis absorbance (ABS) at 600 nm, was continuously monitored by spectrophotometry (Multiskan GO Microplate Readers, Thermo Fisher Scientific, Waltham, Massachusetts, USA) for 24 h. Three biological replicates were performed for each strain and two different experiments were duplicated.
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7

Determining Minimum Inhibitory Concentrations

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Minimum inhibitory concentrations of the extracts were determined by the microdilution method (Burt and Reinders, 2003) (link). 50 µL of Mueller Hinton Broth (Biolife), 50 µL of extracts at various concentrations, and 50 µL of culture (S. aureus ATCC 25923, S. aureus RSSK 1009, B. cereus NCTC 7464, and B. subtilis ATCC 6633, S. Typhimurium ATCC 14028, S. Enteritidis ATCC 13076, E. coli ATCC 25922, and E. coli ATCC 8739) were loaded into 96-well plates. After 18-24 hours of incubation at 37°C, the absorbance was measured at 450 nm by a spectrophotometer (Thermo scientific, Multiscan FC, USA). The maximum concentration observed was calculated according to the OD values.
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8

Antibiotic Resistance Profiling of Clinical Isolates

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The bacteria were recent clinical isolates, belonging to the Institute of Microbiology (University of Genova) collection. They comprised of: (i) ten S. aureus strains, including five methicillin-resistant (MRSA) and five methicillin-susceptible (MSSA) strains. Of the MRSA strains, three were multi-resistant (resistant to at least three classes of antibiotics); (ii) ten multi-resistant Escherichia coli strains; (iii) ten Pseudomonas aeruginosa strains; (iv) ten vancomycin-resistant and susceptible Enterococcus faecalis and Enterococcus faecium strains; and (v) ten group A streptococci (Streptococcus pyogenes) strains, which remain universally susceptible to penicillin. All isolates were identified at the species level using clinical methods and an API STAPH, API20E, API NE and API STREP system (bioMèrieux, Marcy l’Etoile, France) for S. aureus, E. coli, P. aeruginosa, Enterococcus spp. and S. pyogenes respectively. The antibiotype was determined using the disk diffusion test, as according to the latest Clinical and Laboratory Standards Institute (CLSI) guidelines [57 ]. Strains were cultured in Mueller-Hinton Broth, Mueller-Hinton agar, MacConkey agar and Columbia blood agar (Biolife, Milan, Italy) at 37 °C.
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9

Cytotoxicity and Apoptosis Assays

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Petroleum ether (boiling point ranges: 40 °C-60 °C), methylene chloride, ethyl acetate, deuterochloroform (CDCl3), dimethyl sulfoxide (DMSO) and HPLC grade methanol were obtained from Sigma-Aldrich (Steinheim, Germany). Water was treated in a Milli-Q water purification system (TGI Pure Water Systems, Brea, CA, USA). Mueller Hinton agar was obtained from Merck (Germany). Nutrient liquid medium, Mueller Hinton broth was purchased from Biolife (Italy). 3-(4,5-Dimethylthiazol-2-yl)-2,5-diphenyltetrazolium bromide (MTT) was obtained from SERVA (Heidelberg, Germany). Annexin V-FITC/7-AAD Kit was purchased from Beckman Coulter (USA). Standard antibiotics, Cisplatin, Phosphate-buffered saline (PBS), Ribonuclease A (RNAse A), fetal bovine serum (FBS) and 7-Aminoactinomycin D (7-AAD) were obtained from Sigma-Aldrich (Steinheim, Germany).
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10

Antibacterial Activity of Naphthoquinones

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Minimal inhibitory concentrations (MICs) were determined by the microbroth dilution method according to the Clinical and Laboratory Standards Institute document (CLSI, 2009[6 ]) in Mueller Hinton broth (Biolife, Italy). Briefly, the DMSO solutions of isolated naphthoquinones (or standard antibiotics) were prepared as serial two-fold dilutions with the final concentrations ranging between 0.25-512 μg/mL. After that, each well was inoculated with microbial suspension at the final density of 0.5 McFarland. After 24 h of incubation at 37 °C, the inhibition of microbial growth was evaluated by measuring the well absorbance at 450 nm in an absorbance microplate reader Biotek EL808 with shaker (Biotek Instruments, USA). The 96-microtiter plates were read before and after experiment. Measurement error was established for 0.05 values of absorbance. Wells without tested naphthoquinones (or standard antibiotics) were used as negative controls of growth. Pure DMSO was used as a negative control. This experiment was done in eight-replicates for a higher accuracy of the MICs of tested compounds.
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