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28 protocols using atp assay kit

1

Measuring Mycelial ATP Content

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The ATP content of each sample was measured using an ATP assay kit (Solarbio, Beijing, China) as instructed by the manufacturer. The ATP extract from the kit was used to lyse the mycelium, followed by centrifugation at 8000 g for 10 min at 4°C, transferring supernatant to another EP tube, adding 500 μl of chloroform and well shaking, centrifugation at 10000 g for 3 min at 4°C, collecting the supernatant to determine the ATP content for different treatment groups.
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2

Multiomics Analysis of Herbal Medicine

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The BCA kit, DA (rat) kit, β-hydroxybutyric acid (β-HB; rat) kit, acetoacetic acid (AcAc; rat) kit, and citrate synthase (CS; rat) kit were purchased from Sangon Biotech (Shanghai, China). The ATP assay kit, mitochondrial complex I assay kit, glucose kit, and hexokinase (HK) kit were purchased from Solarbio (Beijing, China). Scutellariae Radix, licorice, Paeoniae Radix Alba, and Jujubae Fructus were purchased from the Beijing Tongren drug store (Beijing, China). Rotenone was purchased from Target Mol (USA) and madopar was purchased from Shanghai Roche Pharmaceuticals Ltd. D2O was purchased from Norell (Landisville, PA, USA). Sodium 3-trimethylsilyl 2,2,3,3-d4 propionate (TSP) was purchased from Cambridge Isotope Laboratories Inc. (Andover, MA, USA). Primary antibodies for GLUT1, MCT1, and GAPDH were purchased from Proteintech Group Co., Ltd. (Chicago, IL), and anti-rabbit lgG/HRP and anti-MCT2 were purchased from Bioss, Inc.
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3

Yeast Growth and Metabolite Analysis

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Strains in seed cultures were grown overnight to reach the late exponential phase. Then seed cultures were inoculated to 50 mL YPD medium with 10 mM CaCl2 and 0.6 mM ZnCl2 with an initial OD600 of 0.005. Samples were taken at different time points for analysis. The concentration of metabolites (glucose, ethanol, glycerol, etc.) in the culture was measured as described by Huang et al. [48 (link)]. 20μL supernatant was loaded to an Aminex HPX-87H column (Bio-Rad, USA) on a Nexera XR HPLC system (Shimadzu, Japan) and the mobile phase was 5 mM H2SO4 with a flow rate of 0.6 mL/min at 45 °C.
Intracellular ATP, NAD(H), NADP(H) and GSH were determined by using ATP assay kit (Cat No. BC0300, Solarbio, China), NAD(H) assay kit (Cat No. BC0310, Solarbio, China), NADP(H) assay kit (Cat No. BC1100, Solarbio, China) and GSH assay kit (Cat No. BC1170, Solarbio, China), respectively, according to the manufacturer’s protocols.
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4

Quantifying Metabolic States in E. coli

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E. coli cells were cultured in M9 medium until early mid-log phase (OD600, 0.8 to 1.0) and collected for the quantitative determination of intracellular ATP/ADP ratios and acetyl-CoA levels using the ATP assay kit (Solarbio, Beijing, China), ADP assay kit (Solarbio, Beijing, China), and acetyl-CoA assay kit (Solarbio, Beijing, China). Extraction and quantification for intracellular ATP/ADP ratios were carried out according to the ATP and ADP assay kit instructions, and the analysis of ATP/ADP ratios was performed with an Agilent 1260 series HPLC system. The analytical column was a Thermo 250-mm by 4.0-mm ODS-2HYPERSIL C18 column. The intracellular acetyl-CoA level was analyzed according to previous publications (52 (link), 53 (link)).
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5

Quantifying Metabolic Profiles of Transfected Cells

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Transfected cells were seeded into 12-well plates and cultured for 48 h. The supernatant was collected, and the glucose and lactate levels were measured using the Glucose Assay Kit (Solarbio, Beijing, China) and Lactate Assay Kit (Solarbio, Beijing, China), respectively. The intracellular ATP level was measured using the ATP Assay Kit (Solarbio, Beijing, China) according to the manufacturer’s instructions.
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6

Metabolic Changes in Cell Culture

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The cells were seeded in 6-well plates and were treated with Compound C for 24 hours in advance. The glucose uptake rate and lactic acid production in the culture supernatant were measured via a glucose assay kit and lactic acid assay kit (Jiancheng Bioengineering Institute, Nanjing, China) according to the manufacturer's instructions. The intracellular ATP content was detected via absorption at 630 nm using the ATP assay kit (Solarbio Science and Technology, Beijing, China) according to the manufacturer's instructions.
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7

Leaf Physiology and Antioxidant Evaluation

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Three plants per replicate were harvested and weighed immediately after removing the roots. Leaf relative water content (RWC) was determined following the method of Xu [102 (link)]. Fresh shoots were weighed quickly to obtain fresh weight (FW). Shoots were then soaked in distilled water for 4 h, and turgid weight (TW) was measured. To measure dry weight (DW), the shoots were dried at 80 °C for 24 h. RWC was calculated as follows: RWC (%) = [(FW-DW)/(TW-DW)] × 100. Superoxide radical (O2·−) was detected using the superoxide radical kit R30343 (Yuanye, Shanghai, China).
Leaf samples were used to measure ATP content. Homogenate was centrifuged for 10 min at 8000× g at 4 °C. Absorbance of the collected supernatant was measured with an ultraviolet spectrophotometer at 700 nm. ATP content was measured using an ATP assay kit (Solarbio, Beijing, China) and was expressed as μmol∙g−1 DW.
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8

Quantifying Intracellular ATP and NADP+/NADPH

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The culture was collected and immediately centrifuged for 10,000 rmp for 1 min at 4 °C. The collected cells were washed with TE buffer to determine the intracellular ATP concentration. The ATP content was tested using an ATP assay kit (Solarbio, Beijing, China) following the manufacturer’s protocols. The collected cells were washed once with ice-cold PBS to determine the intracellular NADP+/NADPH concentration and then 0.5 mL of NADP extraction buffer for NADP+ determination or 0.5 mL of NADPH extraction buffer for NADPH determination. Heat extracts were incubated at 80 °C for 5 min, 10,000 rmp was centrifuged at 4 °C for 10 min, and 200 µL of the supernatant was measured using an NADP+/NADPH content assay kit (Solarbio, Beijing, China) according to the manufacturer’s protocols.
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9

Lactate and ATP Production Assay

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Lactate and ATP levels were measured using the lactate production assay kit (Solarbio) and the ATP assay kit (Solarbio), respectively, following the manufacturer’s protocol.
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10

Measuring Glycolytic and Mitochondrial ATP in GC Cells

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ATP levels in GC cells were measured using an ATP assay kit (Solarbio Life Science, Beijing, China) according to the manufacturer’s instructions. To measure the levels of glycolytic or mitochondrial ATP production, 2 × 105 BGC-823 or 1 × 105 MKN45 cells were seeded into plates and incubated in media containing 100 nM oligomycin A (Selleck) or 10 mM pyruvate in the absence of glucose and glutamine for 5 h. After being washed with PBS, the cells were lysed and examined for ATP levels using an ATP assay kit according to the manufacturer’s protocol.
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