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Dulbecco s phosphate buffered saline pbs

Manufactured by Merck Group
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Dulbecco's Phosphate Buffered Saline (PBS) is a widely used buffer solution in biological research and laboratory applications. It is a balanced salt solution composed of sodium chloride, potassium chloride, sodium phosphate, and potassium phosphate. The primary function of PBS is to maintain the physiological pH, osmolarity, and ionic balance of biological samples, cells, or tissues, which is essential for preserving their structural and functional integrity during various experimental procedures.

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110 protocols using dulbecco s phosphate buffered saline pbs

1

Anaerobic Bacterial Growth with PVP/Mucin

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For experiments with high molecular weight polymers K 90 polyvinylpyrrolidone (MW 360,000 g/mol, Carl Roth, Karlsruhe, Germany, order nr. CP15.1) and Type I-S mucin (Bovine Submaxillary glands, Merck, Darmstadt, Germany, order nr. M3895-100MG) was used. From a PVP or Mucin stock solution (see Supplementary Text 2), the desired end-concentration of the additive as stated in the experiment was prepared in Dulbecco’s phosphate buffered saline (PBS, Merck, Darmstadt, Germany, order nr. D5652) to a volume of 90 μl. The solution was then incubated anaerobically at 37°C for at least 1 h. From a mid-exponential culture (OD600 0.4–0.6) 1 ml was centrifuged at 1,500 × g for 15 min using slow acceleration and deceleration ramps during centrifugation. The supernatant was removed, and the pellet resuspended to an OD600 of 6 in anaerobised BHIS. From the bacterial suspension, 10 μl were added to the PVP/Mucin solution for a final volume of 100 μl and OD600 of 0.6.
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2

Cell Culturing Protocol with Reagents

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The following media, enzymes, and sera used for cell culturing were purchased from Capricorn Scientific, Ebsdorfergrund, Germany: Minimal Essential Medium (MEM) with Earle’s salts (#MEM-A), fetal bovine serum (#FBS-HI-12A), pen/strep 100× (#PS-B), stable L-glutamine, non-essential amino acids (NEAA), and Accutase® (#ACC-1B). The chemicals 3-(4,5-dimethylthiazolyl-2)-2,5-diphenyltetrazolium bromide (MTT, #M2128-1G), Sodium pyruvate (#S8636), and Dulbecco’s phosphate-buffered saline (PBS, #D8537) were products of Merck (Sigma-Aldrich, Steinheim, Germany). Methylene blue (MB, #PHR3838) and toluidine blue O (TBO, #198161) were purchased from Merck (Darmstadt, Germany).
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3

Extraction and Analysis of Insect Lipids

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Dry larvae of T. molitor and H. illucens were purchased from online distributors (Highridge and Chubby Mealworms, respectively). Prior to extraction, insects were ground in a knife mill (Grindomix GM 200, Retsch GmbH, Haan, Germany) and stored at room temperature in sealed bags protected from light, oxygen and moisture until further use.
Absolute ethanol was from Panreac (Barcelona, Spain). Hexane (95%), methanol and ethyl acetate were acquired from Macron (Gliwice, Poland). N,O-bis-(trimethylsilyl)trifluoroacetamide (BSTFA), 2,2-diphenyl-1-picrylhydrazyl (DPPH), Dulbecco’s phosphate buffered saline (PBS), 4-methylumbelliferyl oleate (4-MUO) and lipase from porcine pancreas were from Merck KGaA (Darmstadt, Germany).
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4

Curcumin Characterization and Antioxidant Assays

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Methanol for sample preparation and HPLC-grade solvents were purchased from VWR International (Edmonton, AB, Canada). Pure curcumin standard (Product No. 78246, ≥99.5%), was purchased from Sigma-Aldrich (St. Louis, MO, USA). Deuterium-labelled curcumin standard, namely d6-curcumin, was purchased from C/D/N Isotopes (Pointe-Claire, QC, Canada). Most chemicals and reagents that were required for chemical- and cell-based antioxidant assays and cell viability assays were purchased from Sigma-Aldrich, while the glutathione Assay Kit was purchased from Cayman Chemical (Item No. 703002; Ann Arbor, MI, USA). Caco-2 cells used in this study, were obtained from American Type Culture Collection (ATCC; Manassas, VA, USA). Cell culture dishes and plates were purchased from Sarstedt AG & Co. KG (Nümbrecht, Germany). Dulbecco’s modified Eagle’s medium (DMEM; Product No. D5796), Dulbecco’s Phosphate Buffered Saline (PBS; Product No. D8537), Penicillin-Streptomycin (Product No. P0781) came from Sigma-Aldrich. Fetal Bovine Serum (FBS; Product No. 10437028) and Trypsin-EDTA (0.05%), phenol red (Product No. 25300062) produced by Gibco™ were purchased from Fisher Scientific.
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5

AhR Ligand Binding Assay

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HN30 cells were utilized in this assay because of high levels of AHR expression. Cells were seeded into 12-well plates at 50,000 cells/well and cultured for 48 h in DMEM/F12 medium (Sigma) with 10% fetal bovine serum (Gemini BioProducts, West Sacramento, CA, USA), 25 mM HEPES, pH 7.4, and 100 U/mL penicillin and 100 μg/mL streptomycin. The medium was removed, and cells were washed with Dulbecco’s phosphate-buffered saline (PBS, Sigma). Cells in each well were incubated in 500 μL Hanks balanced salt solution (Gibco), 25 mM HEPES (pH 7.4), and 5 mg/mL bovine serum albumin for 30 min in an incubator. Next, cells were treated with AHR ligands, followed by the addition of 2 pmoles of [125I]-PAL, and cells were placed back in the incubator for 30 min. The medium was removed, 500 μL of PBS was added, and cells were exposed to UV light at >302 nm, at a distance of 8 cm, for 4 min using two 15-W UV lamps (Dazor Mfg. Corp. St. Louis, MO, USA). The PBS was removed, and cells lysed in 100 μL of 25 mM MOPS, 2 mM EDTA, 0.02% sodium azide, 10% glycerol, and 1% NP40. Lysates were transferred to microfuge tubes and centrifuged at 18,000× g for 20 min. Supernatants were subjected to tricine SDS-PAGE, and subsequently transferred to PVDF membrane. The radioactive AHR band was visualized with X-ray film, excised, and counted in a gamma counter.
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6

Quantitative Proteomic Analysis of Apoptosis

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DMXAA (purity ≥ 98%), 13C6-L-lysine, L-lysine, 13C 15 (link)6 N4-L-arginine, L-arginine, RNase A, propidium iodide, Dulbecco’s phosphate-buffered saline (PBS), heat-inactivated fetal bovine serum (FBS), dialyzed FBS, and Roswell Park Memorial Institute (RPMI)-1640 medium for SILAC were purchased from Sigma-Aldrich Co. (St Louis, MO, USA). The 5-(and 6)-chloromethyl-2′,7′-dichlorodihydrofluorescein diacetate (CM-H2DCFDA) was sourced from Invitrogen Inc. (Carlsbad, CA, USA). A FASP™ protein digestion kit was purchased from Protein Discovery Inc. (Knoxville, TN, USA). RPMI-1640 medium for general cultural use was obtained from Corning Cellgro Inc. (Herndon, VA, USA). The polyvinylidene difluoride membrane was purchased from EMD Millipore Inc. (Bedford, MA, USA). Proteomic quantitation kits for acidification, desalting, and digestion, ionic detergent compatibility reagent, a Pierce bicinchoninic acid protein assay kit, and Western blotting substrate were obtained from Thermo Fisher Scientific Inc. (Waltham, MA, USA). Primary antibodies against human cytochrome c, cleaved caspase 3, microtubule-associated protein 1A/1B-light chain 3-I (LC3-I), LC3-II, and beclin 1 were all purchased from Cell Signaling Technology Inc. (Beverly, MA, USA). The antibody against human β-actin was obtained from Santa Cruz Biotechnology Inc. (Dallas, TX, USA).
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7

Collagen-based Hydrogel Fabrication

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4-vinylbenzyl chloride (4VBC), glycidyl methacrylate (GMA), methacrylic anhydride (MA), triethylamine (TEA), 2-Hydroxy-4′-(2-hydroxyethoxy)-2-methylpropiophenone (I2959), 2,4,6-trinitrobenzenesulfonic acid (TNBS), acetic acid (AcOH), and Dulbecco’s Phosphate Buffered Saline (PBS) were purchased from Sigma Aldrich (St. Louis, MO, USA) and used as received. Rat tails were received from Central Biomedical Services at the University of Leeds (UK) and used for the acidic extraction of type I collagen. Dulbecco’s modified Eagle’s medium (DMEM), foetal calf serum (FBS) and penicillin-streptomycin (PS) were purchased from Gibco (Waltham, MA, USA). All the other chemicals were purchased from Sigma Aldrich (St. Louis, MO, USA).
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8

Analyzing ACKR3 Platelet Expression

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Platelets in whole blood were analyzed for ACKR3 platelet surface exposure gating for the platelet-specific marker CD42b. Blood collected in citrate phosphate dextrose adenine was diluted 1:50 with Dulbecco’s phosphate-buffered saline (PBS; Sigma Aldrich Co., St. Louis, MO, USA) and incubated with the respective conjugated antibodies, mouse monoclonal anti-human ACKR3-PE (R&D systems, Minneapolis, Minnesota, USA) and mouse anti-human CD42b-FITC (Beckman Coulter, Brea, California, USA) or their respective isotype controls (R&D systems) for 30 min at room temperature (RT). After staining, the cells were fixed with 0.5% formaldehyde and analyzed by flow cytometry (FACS-Calibur flow cytometer Becton-Dickinson, Heidelberg, Germany).
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9

Lewis Lung Carcinoma Cell Culture

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Lewis lung carcinoma cells (3LL, called also LLC) were purchased from Nanjing KeyGen Biotech Inc. (Nanjing, China). The cells were cultured in RPMI-1640 culture medium (HyClone, USA) with 10% heat inactivated fetal bovine serum (HyClone, USA) in a CO2 incubator under moist condition of 5% CO2 in air at 37 oC. The cells were harvested from exponentially growing cultures, and resuspended in Dulbecco's phosphate-buffered saline (PBS) (Sigma, USA), 1×108 viable cells/mL for animal model preparation. Viability of cells was determined by trypan blue (Sigma, USA).
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10

Isolation and Culture of IFP-MSCs

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IFP tissue (5–10 cc) was mechanically dissected and washed repeatedly with Dulbecco’s Phosphate Buffered Saline (PBS; Sigma), followed by enzymatic digestion using 235 U/mL Collagenase I (Worthington Industries, Columbus, OH, USA) diluted in PBS and 1% bovine serum albumin (Sigma) for 2 h at 37 ℃ with agitation. Cell digests were inactivated with complete media [DMEM low glucose GlutaMAX (ThermoFisher Scientific, Waltham, MA, USA) + 10% fetal bovine serum (FBS; VWR, Radnor, PA, USA)], washed, and seeded at a density of 1 × 106 cells/175 cm2 flask in complete human platelet lysate (hPL) medium. Complete hPL medium was prepared by supplementing DMEM low glucose GlutaMAX with hPL solution and 0.024 mg/mL xeno-free heparin (PL Bioscience, Aachen, Germany) to obtain a 10% hPL final concentration. IFP-MSC were cultured at 37 °C 5% (v/v) CO2 until 80% confluent as passage 0 (P0), then passaged at a 1:3 ratio until P2, detaching them with TrypLE™ Select Enzyme 1× (Gibco, ThermoFisher Scientific, Waltham, MA, USA) and assessing cell viability with 0.4% (w/v) Trypan Blue (Invitrogen, ThermoFisher Scientific).
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