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31 protocols using varian cary 50 uv vis spectrophotometer

1

Antioxidant Activity Assays of Natural Compounds

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DPPH is determined according to Brand-Williams [36 (link)]. The absorbance is measured at 517 nm on a Varian Cary 50 UV-Vis spectrophotometer (Agilent Technologies, Inc., Santa Clara, CA, USA). Vitamin C solution is used as a standard. The concentration of lipid peroxidation products was determined as the amount of substances that react with thiobarbituric acid reactive substances (TBARS) [37 (link)]. Spectrophotometric readings were carried out at 532 and 600 nm on a Varian Cary 50 UV-Vis spectrophotometer. As for the FRAP method, as previously described [38 (link)], absorbance from ethanol extracts was measured at 593 nm on a Varian Cary 50 UV-Vis spectrophotometer (Agilent Technologies, Inc., Santa Clara, CA, USA).
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2

Synthesis and Characterization of Citrate-Derived Carbon Dots

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Cdots were synthesized using a modified hydrothermal method described previously.[40] In a typical experiment, 2 g of citrate (Sigma‐Aldrich, USA) and 1 g of l‐tryptophan (L‐Trp) (Sigma‐Aldrich, USA) were dissolved in 30 mL of deionized water and stirred for 1 h to form a homogeneous solution. The solution was heated at 160 °C for 2 h in a polytetrafluoroethylene (Teflon)‐lined autoclave reactor (Autoclave, USA), and the resulting homogeneous dark brown solution was allowed to cool to room temperature. The solution was centrifuged at 12 000 rpm for 10 min to remove unreacted precipitates. Excess citric acid and L‐Trp were removed by repeated dialysis (1000 Da cutoff) against deionized water for 2 d. Dry Cdots were collected by freeze‐drying and weighed and dissolved in phosphate‐buffered saline (PBS) for further use. Cdot size and morphology were characterized by using a JEM‐2100 transmission electron microscope (JEOL, Japan). Cdot UV–vis absorption spectra were collected using a Varian Cary 50 UV–vis Spectrophotometer (Varian, Inc., USA). Cdot FTIR spectra were collected using a Nicolet 6700 FTIR spectrometer (Thermo Electron Corporation, USA).
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3

Cell Growth and Metabolite Analysis

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Cell growth was measured as cell dry weight (CDW) after washing and drying to constant weight at 105 °C and/or as the OD600 of the culture (Varian Cary 50 UV–VIS spectrophotometer, Varian Inc.). Metabolite and glucose concentrations were analysed by HPLC (Agilent series 1200, Agilent, Spain) under the following conditions: mobile phase 5 mM H2SO4, flow rate 0.5 mL/min, column temperature 60 °C, injection volume 20 µL, stationary phase IEX H polymer (Watrex, Czech Republic), refractive index detection.
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4

Olive Phenolic Antioxidant Capacity

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Five grams of destoned olives were homogenized, added with 10 mL of methanol and vigorously stirred for 20 minutes, then centrifuged at 4000 rpm for 25 min. DPPH-free radical scavenging capacity of phenolic extracts was evaluated according to the following protocol: 200 μL of the extracts or standard (Trolox) was added to 3 mL methanol solution of DPPH radical. After 1 min of vigorous shaking by vortex, the reaction mixture was left to stand at room temperature, in the dark, for 60 min. After that, the absorbance for the sample was read using a Varian Cary 50 UV–vis spectrophotometer (Varian Inc., Middelburg, The Netherlands), at λ = 517 nm, optical path 10 mm. A negative control was taken after adding the DPPH solution to the respective extraction solvent. The free radical scavenging capacity was expressed in Trolox equivalents (TE), e.g., mmol TE/kg, and quantified against a calibration curve of Trolox (r = 0.99).
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5

Quantifying Chlorophyll and Carotenoids in Oils

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Chlorophyll and carotenoid concentrations were determined using a Varian Cary 50 UV/Vis spectrophotometer (Varian Inc., Harbour City, CA, USA) following the procedure of Mínguez-Mosquera et al. [37 (link)] and expressed as pheophytin a and lutein content (mg/kg), respectively. Briefly, a sample of oil (7.5 g) was weighed and dissolved in cyclohexane in a 25 mL flask. Chlorophyll and carotenoid concentrations were calculated from the oil absorption spectrum. Absorption at 670 nm is associated with the chlorophyll fraction, whose main component is pheophytin a. The pigment that has the highest concentration in the carotenoid fraction is lutein, and its absorption was measured at 470 nm. The values of the specific extinction coefficients used to calculate the pigment concentrations were E0 = 613 for pheophytin and E0 = 2000 for lutein. The following formulas was used to calculate chlorophyll (6) and for carotenoid (7) concentration: Chlorophyll=A670×106613×100×d
where A670 is absorbance on 670 nm, d is thickness of spectrophotometric cuvette, 613 is value of coefficient of specific extinction for phephitin a (E0);
Carotenoid=A470×1062000×100×d
where A470 is absorbance on 470 nm, d is thickness spectrophotometric cuvette, 2000 is value of coefficient of specific extinction for lutein (E0).
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6

Chlorophyll and Carotenoid Quantification

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Chlorophyll and carotenoid concentrations were determined using a Varian Cary 50 UV/Vis spectrophotometer (Varian Inc., Harbour City, CA, USA) following the procedure of Mínguez-Mosquera et al. [33 (link)] and expressed as pheophytin a and lutein content, respectively.
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7

Spectrophotometric Determination of Enzyme Activities

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Specific spectrometric assays (Varian—CARY® 50 UV–VIS Spectrophotometer, Varian Inc., The Netherlands) were availed for determination of activities of selected enzymes. Exact procedures for the determination of α-amylase, cellulase, lipase, peroxidase, protease, and transglutaminase activities are precisely described by Leitgeb et al. [97 (link)]. Polyphenol oxidase activity was determined using Creative Enzymes® protocol [99 ], where the concentration of o-benzoquinone formed from L-DOPA by polyphenol oxidase was measured at 265 nm. Superoxide dismutase activity was determined using a reaction of pyrogallol autoxidation at 325 nm, described by the Creative Enzymes® protocol [100 ]. The results are reported as units (U) per g of extract. All experiments were carried out in triplicates, and results are presented as mean value ± SD.
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8

Basic Reagents and Analytical Instruments

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All basic reagents were from Sigma-Aldrich Company (Poznan, Poland). All reagents used were of analytical reagent grade. All the spectrophotometric analyses were done using a Varian Cary 50 UV–vis spectrophotometer (Varian Inc., Cary, NC, USA). Fluorescence was read using an Infinite 200 PRO multimode reader (Tecan Group Ltd., Männedorf, Switzerland).
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9

Spectrophotometric Enzymatic Assays of Key Biomolecules

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The enzyme activity of α-amylase [38 (link)], cellulase [39 (link)], glucoamylase [40 ], laccase [41 (link)], lipase [38 (link)], peroxidase [35 (link)], polyphenol oxidase (PPO) [42 (link)], protease [39 (link)], SOD [43 (link)], and transglutaminase (TGM) [44 (link)] were examined with specific spectrophotometric enzymatic assays for each selected enzyme using a UV spectrophotometer (Varian—CARY® 50 UV–VIS Spectrophotometer, Varian Inc., Middelburg, The Netherlands). Each assay was performed in three replicates. The results are reported as mean values expressed in units (U) per g of protein.
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10

Photoswitchable Heparin Characterization

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Varian Cary 50 UV–VIS spectrophotometer
(Agilent Technologies, Santa Clara, CA) was applied to record the
spectra (transmittance mode, range: 200–800 nm, data interval:
0.5 nm), FT-IR spectrophotometer Nicolet iS10 (Thermo Scientific,
Waltham, MA), and Nano ZS instrument (Malvern Instrument, Worcestershire,
UK) were used. GPC measurements were performed using a Malvern Panalytical
OMNISEC chromatograph. The PolySep-SEC GFC-P Linear column, LC Column
300 × 7.8 mm (Phenomenex, Torrance, CA) was used. The flow rate,
injection volume, and polymer concentration were 0.8 mL/min, 100 μL,
and 5 mg/mL, respectively, eluent: 0.1 M NaNO3 80/20 H2O/acetonitrile. Irradiation of photoswitchable heparins was
carried out using 340 nm (trans–cis isomerization)
and 530 nm (cis–trans isomerization) LED lamps
(Thorlabs). Maximum irradiance, Ee, of
the lamps was 0.6 and 9.46 μW/mm2, respectively,
at a distance of 200 mm, as given by the manufacturer.
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