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8 protocols using spot ccd camera

1

Histological Analysis of Mouse Embryos and Eyes

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Mice were anesthetized by sevoflurane and then sacrificed by cervical dislocation to get embryos or eyeballs, and efforts were made to minimize the number of animals used and their suffering. Embryos or postnatal eyes were dissected and fixed in 4% paraformaldehyde (embryos) or Davidson’s fixative (postnatal eyes) [18 ] overnight at 4°C. The samples then underwent graded alcohols dehydration, clearing in xylene and embedded in paraffin. 4μm sections were cut for using. Sections were stained with Hematoxylin and Eosin and pictures were taken using an Olympus light microscope equipped with a Spot CCD camera.
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2

Immunostaining of Neural Cell Populations

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Cell populations were dissociated with Pasteur pipettes and plated onto Matrigel GFR-coated glass coverslips (BD-Italia) to perform the immunostaining. Cells were fixed in 4% paraformaldehyde and permeablized with 0.2% Triton-100 and subsequently processed for immunolabeling. The following primary antibodies (Ab) were used: mouse anti-MAP2 (a/b), and rabbit anti-Nestin (Millipore). The secondary Ab used were: fluorescein isothiocyante (FITC) affinity purified goat anti-rabbit and Tetramethyl rhodamine isothiocyanate (TRITC) affinity purified donkey anti-mouse (Chemicon). Nuclei were stained with Hoechst 33258 diluted in PBS (0,2 μg/ml; SIGMA). Cells were photographed at 400X magnification using a fluorescent microscope (Olympus microscope OLYMPUS Bx5 with Spot CCD Camera). A quantitative cell analysis was performed by counting for each antibody used almost 100 cells/field of five fields from each of three independent experiments.
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3

Immunofluorescence Staining of Paraffin Sections

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The paraffin sections underwent deparaffinization and rehydration. Epitope retrieval was performed in 0.1M sodium citrate buffer (pH 6.0) at 100°C for 10 minutes, then blocking for 1h with 5% BSA. After the addition of primary antibodies, sections were incubated in a humidified chamber at 4°C overnight. After three washing steps with PBS, the secondary antibodies were added and incubation continued at room temperature for 1 hour. Cell nuclei were counterstained with DAPI and pictures were taken using an Olympus fluorescence microscope equipped with a Spot CCD camera. The primary and secondary antibodies are listed in S1 Table.
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4

Isolation and Characterization of Rat Aortic Endothelial Cells

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Isolation of rat aortic endothelial cells (ECs) from primary explants was prepared from male Sprague-Dawley rats (4 weeks of age) as previously reported 35 (link). Pure endothelial cells were maintained with 10 % FBS/DMEM at 37°C in an incubator with a humidified atmosphere of 5 % CO2. The confluent cell at passage numbers 3-6 exhibited a typical “cobblestone” growth pattern 35 (link), which identified with the endothelium-specific antibody, von Willebrand Factor (vWF) 36 (link) were used for the experiments. A density of 4 x105 cells/mL seeded into 10-cm plates were treated with vehicle (normal saline) or t-BHP (50, 100, 250, 400, or 1000 μM) in 2 % FBS/DMEM for 15 min, 30 min, 1 hour, 2 h, or 24 h according to previous studies 10 (link),18 -19 (link),35 (link),37 (link).
Changes of cell morphologies were observed under the CKX41 inverted phase-contrast light microscope (Olympus, Japan) and the digital images were captured by Spot CCD Camera which driven by Advanced Spot RT Software version 3.3. The cell viability in response to t-BHP treatment was assessed by MTT assays as describe by Yeh et al. 38 . The optical density (O.D.) values reflected the MTT reductase activities and hence the amounts of viable cells. Results were expressed with respect the control. At least three experiments were conducted for each treatment, using the mean value for data analyses.
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5

Chromosome Identification via GISH and FISH

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Genomic in situ hybridization (GISH) and fluorescence in situ hybridization (FISH) were performed as described by Kato et al. (2004) (link) and Han et al. (2006) (link). The labeled genomic DNA of T. elongatum was used as a probe for GISH analysis. Oligo-pAs1-1, Oligo-pAs1-3, Oligo-pAs1-4, Oligo-pAs1-6, Oligo-AFA-3, Oligo-AFA-4 (red), Oligo-pSc119.2-1, and (GAA)10 (green) probes were used according to Du et al. (2017) (link). Oligonucleotide probes were synthesized by Shanghai Invitrogen Biotechnology Co. Ltd. (Shanghai, China). The slides were mounted in Vectashield antifade solution containing 4′-6-diamino-2-phenylindole (DAPI; Vector Laboratories Inc., Burlingame, CA, United States). A fluorescence microscope (BX60, Olympus Corp., Tokyo, Japan) fitted with a Spot CCD camera was used to capture hybridization signals. The images were compiled with CellSens Vers.1.5 Imaging software (Olympus Corp.).
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6

Differentiation of Neutrospheres into Neural Lineages

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Undifferentiated neutrospheres were maintained in DMEM/F12 (1:1) serum-free medium containing basic fibroblast growth factor (bFGF) and epidermal growth factor (EGF). For differentiation, neutrospheres were dissociated into single cells and a monolayer culture was established by culturing the single cells on at a density of 2 × 104 cells/cm2 onto pre-coated Lab-Tek chamber slides (NalgeNunc, Rochester, NY, USA), previously treated with Matrigel Matrix. The cells were differentiated into neurons, astrocytes and oligodendrocytes by culturing into a differentiation medium in which FGF and EGF were replaced with fetal bovine serum (FBS) at 1%. The cells were fixed in with 4% paraformaldehyde in PBS for 15 min at room temperature, permeabilized with Tris-HCl (0.1 M) + TritonX100 (0.25%) for 10 min, blocked with 10% normal goat serum and then incubated overnight at 4 °C with the primary antibody (anti-nestin, anti-glial fibrillary acidic protein, and anti-MAP2). Following washing, the cells were incubated with specific secondary antibodies for one hour at room temperature. The nuclei were stained with bisBenzimide H33258 diluted in PBS (0.2 µg/mL; SIGMA, St. Louis, MO, USA). Immunocytochemistry analysis was performed using fluorescent microscopy on an OLYMPUS Bx5 with Spot CCD Camera (Olympus Corporation BX 60 Fluorescence Microscope, Shinjuku, Tokyo, Japan).
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7

Retinal Vascular Patterning Analysis in Mouse Pups

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Mouse pups were sacrificed at P5. Eyes were fixed in 4% paraformaldehyde (PFA) in PBS at 4°C overnight and washed in PBS. Retinas were dissected, permeabilized in PBS, 5% Normal goat serum (NGS), and 0.3% Triton X-100 at 4°C overnight. They were incubated in FITC (or TRITC)-conjugated isolectin B4 (Bandeiraea simplicifolia; L-2140; Sigma-Aldrich) 20 μg/ml in PBS at 4°C overnight. After washing and a brief post fixation in PFA, the retinas were either flat mounted or processed for multiple labeling. The following antibodies were used: Dll4 (1:100; Santa Cruz, sc-28915), GIT1 (1:200; Santa Cruz, sc-9657), VEGFR3 (1:80; R&D Systems, AF743), Tie2 (1:80; eBiosciences, 14-5987), ERG (1:150; Abcam, #ab92513), GFAP (1:500; Dako, Z0334), GFP 1:500 (Vector, A21311) and Alexa-546, Alexa-488 or Alexa-405 and Alexa-545 conjugated secondary antibodies (1:500, Molecular Probes). Flat mounted retinas were analyzed by fluorescence microscopy using an Olympus BX51 microscope equipped with a digital camera (Spot CCD camera) or by confocal laser scanning microscopy (Olympus confocal system, Fluoview). Images were processed using Adobe Photoshop® and analyzed by Image Pro Plus.
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8

Quantifying Lens Cell Dynamics in Mice

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Pregnant mice were sacrificed at various time points after conception. One hour before sacrificing, the mice were injected intraperitoneally with 100 µg BrdU (Sigma, St. Louis, USA) per gram of body weight. For post-natal mice, BrdU was injected intraperitoneally 2 h before sacrifice [20] . Then the embryos were put into ice-cold PBS.
Apoptotic cells were detected by using the fluorescein in situ Cell Death Detection Kit (Roche Applied Science, Indianapolis, IN). Briefly, 4% PFA-fixed tissue sections were treated with Proteinase K (20 μg/ml) for 20 min. Fragmented DNA was labeled with fluorescein-dUTP, then cell nuclei were counterstained with DAPI. Histological photos were taken by Olympus fluorescence microscope equipped with a Spot CCD camera. Three mice/six lenses from each group were evaluated to detect lens cell proliferation and apoptosis in each of the two groups and the experiment was repeated three times.
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