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33 protocols using txnip

1

Molecular Mechanisms of Inflammation

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The primary antibodies of HSP70, HSP90, TLR4, MyD88, NLRP3, ASC, caspase-1, caspase-11, IL-18, IL-1β, HMGB1, COX-2, iNOS, and caspase-3 were supplied by ABclona Technology (China). Moreover, p-JNK, p-ERK, p-p38, p-IκBα/IκBα, and p-NF-κB (p65) were purchased from Cell Signaling (USA); GSDMD, Bax Trx-1, α-Tubulin, and Txnip were afforded by Abcam (USA). Additionally, CK-MB, CAT, GSH, MDA, and SOD test kits were supplied by Nanjing Jiancheng Biotech. Co., Ltd. (China). Unless specified otherwise, all other reagents were obtained from Sigma–Aldrich (USA).
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2

Cell Culture Protocols for A549, HEK293T, and Kyse150

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In these experimental studies, human A549, HEK293T and Kyse150 cell lines (Chinese Academy of science, shanghai, China) were cultured in Dulbecco's modified Eagle's medium (DMEM; Gibco) supplemented with 10% fetal bovine serum, 1% glutamine, and 1% penicillin–streptomycin. All cells were maintained in a humidified atmosphere of 5% CO2 at 37°C. The antibodies of TXNIP, TRAF6, Caspase‐1/3, Bax, GAPDH, Tubulin, and beta‐Actin were purchased from Abcam Trading (Shanghai) Company (China). Anti‐Flag, anti‐HA antibodies, MG132 were obtained from Sigma. TRIzol and cDNA synthesis kit were from Invitrogen. The second antibodies were obtained from Biorad. Other antibodies were purchased from Cell Signaling Technology. Dual luciferase reporter assay kit was obtained from Promega. Lipofectamine® 3000 was purchased from Thermo Fisher Scientific. All other reagents were obtained from Shanghai Shenggong, China or Sigma. For reagent treatment, cells were loaded onto a culture dish 1 day before treatment with designated time points and concentrations.
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3

Western Blot Analysis of GIC Proteins

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Protein extracts (50 μg) were prepared from GICs in urea-based lysis buffer as previously described [28 (link),29 (link)], separated by SDS-PAGE, transferred to polyvinylidene difluoride membranes (Millipore, Burlington, MA), and immunoblotted with the following antibodies: BRG1 and BRM (Proteintech, Rosemont, IL), TXNIP (Abcam, Cambridge, MA), STAT3 (BD Biosciences, San Jose, CA), pY705-STAT3 and GFAP (Abcam), CDK1, CDK2, Rb, Rb 107, Rb 110 (Cell Signaling, Danvers, MA), and Actin (Santa Cruz, Dallas, TX). Following addition of IRDye800CW goat anti-mouse IgG or IRDye680 goat anti-rabbit IgG, blots were visualized on an Odyssey infrared imaging system (LICOR Biosciences, Lincoln, NE).
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4

Western Blot Analysis of Inflammasome Proteins

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To determine protein expression levels, whole-cell or tissue extracts were lysed with RIPA peptide lysis buffer (Beyotime Biotechnology, Jiangsu, China) containing 1% protease inhibitors (Pierce) and Western blot analysis were performed according to standard procedures. Primary antibodies were used as follows: TXNIP (1:2000, Abcam), NLRP3 (1:1000, Cell Signaling Technology), ASC (1:1000, Abcam), pro-Caspase-1 (1:1000, Abcam), cleaved-Caspase-1 (1:1000, Abcam), IL-1β (1:1000, Abcam), IL-18 (1:1000, Abcam), and GAPDH (1:3000, HuaBio). Protein bands were developed using the enhanced chemiluminescence (ECL) system and were visualized using the ChemiScope Western Blot Imaging System (Clinx Science Instruments Co., Ltd). The gray value assay was performed by using Image J software (Rawak Software, Inc. Germany).
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5

Protein Extraction and Western Blot Analysis

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Total protein was extracted using a TPEB buffer (Invitrogen, Carlsbad, CA); the protein concentration was determined using a BCA analysis kit (Beyotime Biotechnology, Shanghai, China). The protein samples were separated by 10%/12% SDS-PAGE and then transferred to a 0.25 µm PVDF membrane (Millipore, Bedford, MA). Then the membrane was blocked in TBST containing 5% skimmed milk powder for 1 h, and incubated with the primary antibody (TXNIP, Abcam, UK; γ-H2AX, CST, USA) overnight at 4 °C. The next day, after incubation with the secondary antibody (Transgon, China) for 1 h, the membrane was washed in TBST. Finally, bands were processed using an enhanced chemiluminescence (ECL) kit (Biosharp, China).
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6

Quantifying Retinal Protein Expression

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The total protein from each neurosensory retina was extracted in 100 mL of radioimmunoprecipitation assay buffer containing protease and phosphatase inhibitor (Sigma-Aldrich, St. Louis, MO) using a handheld homogenizer. Protein quantification was performed using the BCA protein assay kit (Pierce; Thermo Fisher Scientific, Waltham, MA). Then, 10 mg of protein was loaded on 12% polyacrylamide gels and transferred to polyvinylidene difluoride membranes. Polyvinylidene difluoride membranes were blocked with 5% bovine serum albumin in Tween20/TBS at room temperature for 60 minutes and incubated at 4 C overnight with primary antibodies (GFAP 1:500; Abcam, Cambridge, UK; TXNIP 1:250; Abcam; and b-actin 1:500; Cell Signaling Technology, Beverly, MA). The blots were then incubated with species-specific horseradish peroxidaseeconjugated secondary antibody for 60 minutes at room temperature. Immunoreactive bands were visualized using an ECL Advance Western Blotting Detection Reagent (GE Healthcare, Little Chalfont, UK) and determined using a luminescent image analyzer (LAS-4000 mini; Fujifilm, Tokyo, Japan). Densitometric data for the immunoreactive bands were analyzed using ImageJ software version 1.52 (NIH, Bethesda, MD; http://imagej.nih. gov/ij). Data were normalized to the specified loading controls.
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7

Protein Extraction and Western Blot Analysis

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When cell confluence reached ~90%, total protein was extracted using RIPA protein lysis with PMSF (Beijing Solarbio Science & Technology Co., Ltd.). After bicinchoninic acid (BCA; Wanleibio Co., Ltd.) measurement, the proteins (40 µg/lane) were added to 10% SDS-PAGE (Nanjing KeyGen Biotech Co., Ltd.) and separated, and then transferred to PVDF membrane (EMD Millipore). After blocking with 5% non-fat milk at room temperature for 2 h, membranes were incubated overnight at 4°C with primary antibodies and secondary antibodies at room temperature for 2 h. Antibody incubations were performed at the following dilutions: Trx (cat. no. ab26320; 1:5,000; Abcam), Txnip (cat. no. 14715s; 1:1,000; Cell Signaling Technology, Inc.), ITCH (cat. no. 12117s; 1:1,000; Cell Signaling Technology, Inc.), GAPDH (cat. no. 10494-1-AP; 1:5,000; ProteinTech Group, Inc.), caspase-3 (cat. no. 19677-1-AP; 1:5,000; ProteinTech Group, Inc.) and horseradish peroxidase-conjugated secondary antibodies against rabbit (cat. no. 10285-1-AP; 1:10,000; ProteinTech Group, Inc.). The blots were visualized using ECL (Thermo Fisher Scientific, Inc.) and an ECL system (Fluor Chem FC2, Alpha Innotech, Inc.) was used to visualize the bands. Densitometric analysis was performed by ImageJ software (version 1.8.0; National Institutes of Health). GAPDH was used to normalize the expression data.
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8

Evaluation of Compound Effects on TXNIP, NLRP3, and Caspase Activation

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Min6 cells were plated in six-well dishes with overnight culture and then incubated with 10 μmol/L tested compounds and 300 μmol/L PA for 12 h. Total proteins of cells were lysed with RIPA lysis buffer (Boster, China) and the protein lysis was separated by SDS-PAGE and transferred from gel to PVDF membrane (Millipore, USA). Then, the membranes were blocked, stained overnight with corresponding primary antibodies and then with second antibody for 1 h. The signals of detected proteins were measured by Chemidoc Imaging System (BIO-RAD, USA). The antibody used were as follows: TXNIP (Abcam, ab188865), NLRP3 (Wanlei, Wuhan, China; WL02635), Cleaved caspase 1 (Wanlei, Wuhan, China; WL03450), Cleaved caspase 3 (CST, #9664s), GAPDH (Bioworld, Nanjing, China; AP0063).
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9

Western Blot for TXNIP Protein Analysis

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Protein samples from tissues or cells were extracted using a radioimmunoprecipitation assay buffer supplemented with proteinase inhibitors (Beyotime, Beijing, China) and separated on 10% sodium dodecyl sulfate polyacrylamide gel electrophoresis by electrophoresis. After being transferred onto polyvinylidene fluoride membranes, the proteins were blocked with 5% skimmed milk at room temperature for 1h. Subsequently, the polyvinylidene fluoride membranes were incubated with primary antibodies against TXNIP (Abcam, Cambridge, UK) and β-actin (Abcam) at 4 °C overnight. Next, the membranes were incubated with corresponding secondary antibodies conjugated to horseradish peroxidase. The immunoreactive band were visualized using an enhanced chemiluminescence substrate kit (Pierce, Rockford, USA). β-actin was used as the internal reference.
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10

Quantifying Inflammatory Protein Expression

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We quantified the protein expression of TXNIP, NLRP3, and Caspase-1 by western blot analysis. Total protein was extracted from J774A.1 cells with the help of an ice-cold RIPA lysis buffer. Protein estimation was done by using the BCA protein Assay kit. An equal amount of protein (10 20 µg) was taken from each sample, loaded into the individual lane and subjected to vertical SDS-PAGE electrophoresis (concentrated gel voltage 50V, 1 h, and separated gel voltage 100V, 1.5 h). The cellular proteins were electrophoretically transferred at 200 mA for 3.5 h onto a PVDF membrane by parallel electrophoresis. The PVDF membrane was blocked with 5% skim milk overnight at 4 °C. Further, it was incubated with primary antibodies (β-actin, 1:1000, Cell Signaling Technology; TXNIP, 1:500, Abcam; NLRP3, 1:800, Abcam; Caspase-1, 1:800, Cell Signaling Technology) at 4 °C for 16 h and washed with TBST. It was followed by incubation with corresponding secondary antibody in a shaker for 2 h at room temperature. Protein bands were visualized by the enhanced chemiluminescence system and scanned using the chemiluminescence imaging system.
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