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7 protocols using gibco rpmi medium

1

Characterization of Dasatinib-Resistant Leukemia Cell Lines

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Human pre-BCR+/E2A-PBX1+ ALL cell lines RCH-ACV (RRID: CVCL_1851) and 697 (RRID: CVCL_0079) and pre-BCR/E2A-PBX1 ALL cell lines REH (RRID: CVCL_1650), HAL-01 (RRID: CVCL_1242) and SEM (RRID: CVCL_0095) were obtained from DSMZ (Leibniz Institute, Braunschweig, Germany) and cultured in Gibco™ RPMI medium (Thermo Fisher Scientific, Waltham, MA, USA) supplemented with 10% fetal bovine serum, 100 U/mL penicillin, 100 µg/mL streptomycin and 2 mM L-Glutamine. The SEM cell line was cultured in Gibco™ IMDM medium (Thermo Fisher Scientific) supplemented with 10% fetal bovine serum, 100 U/mL penicillin, 100 µg/mL streptomycin, 4 mM L-Glutamine and 25 mM HEPES. Dasatinib-resistant cell lines were generated and described previously [12 (link)]. Two independent dasatinib-resistant clones were generated in parallel after the incubation of the pre-BCR+/E2A-PBX1+ RCH-ACV cell line with increasing concentrations of dasatinib for at least 9 months. Global transcriptomic profiles were generated to study differences between both clones in previous studies [12 (link)]. All human cell lines have been authenticated using STR (or SNP) profiling within the last three years. All experiments were performed with mycoplasma-free cells.
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2

Culturing Pheochromocytoma Cell Line PC12

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The pheochromocytoma cell line (PC 12), derived from rat adrenal medulla, was purchased from the American Type Culture Collection (ATCC, Manassas, Virginia, United States of America). PC 12 cells were cultured in complete Gibco™ RPMI medium (Thermo Fisher Scientific, Scoresby, Victoria, Australia) supplemented with 10% Gibco™ horse serum (HS; Thermo Fisher Scientific), 5% Gibco™ foetal bovine serum (FBS; Thermo Fisher Scientific) and 1% Gibco™ penicillin/streptomycin (PS; Thermo Fisher Scientific). Supplements were stored as aliquots at −20 °C. Stock solutions of PC 12 cells were prepared in a medium containing 90% FBS and 10 % DMSO and stored in liquid nitrogen. The cells were maintained at a temperature of 37 °C under a 5% CO2 atmosphere in a 95% humidified incubator. The medium was changed every two days and passaged accordingly when the confluence reached 90%.
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3

Culturing Pheochromocytoma PC12 Cells

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Pheochromocytoma cells are derived from the rat adrenal medulla (Tharushi Perera et al., 2022 ▸ ). The PC 12 cell line used in this study was purchased from the American Type Culture Collection (ATCC, USA) and cultured in a complete Gibco RPMI medium (Thermo Fisher Scientific, Australia) supplemented with 10% Gibco horse serum (Thermo Fisher Scientific, Australia, HS), 5% Gibco foetal bovine serum (Thermo Fisher Scientific, Australia, FBS) and 1% Gibco penicillin/streptomycin (Thermo Fisher Scientific, Australia). Supplements were stored as aliquots at −20°C. Stock solutions of the PC 12 cells were prepared in a medium containing 90% FBS and 10% DMSO and stored in liquid nitro­gen. The cells were maintained at 37°C with 5% CO2 in a 95% humidified incubator. The medium was changed every two days and passaged accordingly when the confluence reached 90%.
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4

Cell Line Viability Assay for TCF3-PBX1

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TCF3-PBX1 positive (697, KASUMI-2, RCH-ACV) and negative cell lines (TOM-1, MHH-CALL-4, MUTZ-5) were purchased from DSMZ (Leibniz Institute, Braunschweig, Germany) and cultured in Gibco RPMI medium (Thermo Scientific, Carlsbad, CA, USA) supplemented with 15% fetal bovine serum, 2 mml-glutamine, 100 U/ml penicillin and 100 μg/ml streptomycin. The compounds were pre-plated in 384-well plates at seven different concentrations using the Echo 550 acoustic dispenser. The cells were seeded in 25 μl volume of medium at the following densities: 697 and RCH-ACV, 2500 cells/well; TOM-1, KASUMI-2, 5000 cells/well; and MUTZ-5 and MHH-CALL-4, 7000 cells/well. After 72 h, cell viability was measured using the CellTiter-Glo assay. The data were normalized to the negative control (dimethyl sulfoxide vehicle only) and the positive control wells (100 μmol/l benzethonium chloride).
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5

Culturing Rat Pheochromocytoma PC 12 Cells

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The PC 12 cell line was derived from a transplantable rat pheochromocytoma of the adrenal gland [7 (link)]. The PC 12 cell line was purchased from the American Type Culture Collection (ATCC, USA) and cultured in a complete Gibco™ RPMI medium (Thermo Fisher Scientific, Australia) supplemented with 10% Gibco™ horse serum (Thermo Fisher Scientific, Australia, HS), 5% Gibco™ foetal bovine serum (Thermo Fisher Scientific, Australia, FBS) and 1% Gibco™ penicillin/streptomycin (Thermo Fisher Scientific, Australia, PS). Supplements were stored as aliquots at −20°C. Stock solutions of the PC 12 cells were prepared in a medium containing 90% FBS and 10% DMSO and stored in liquid nitrogen. The cells were maintained at 37°C with 5% CO2 in a 95% humidified incubator. The medium was changed every 2 days and passaged accordingly when the confluence reached 90%.
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6

Gastric Cancer Cell Line Culture

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Human GC cell lines AGS (American Type Culture Collection), MKN28 and NUGC4 (Japanese Collection of Research Bioresources Cell Bank) were grown in Gibco RPMI medium containing 10% fetal calf serum, 1% penicillin-streptomycin, and 1% L-glutamine (Thermo Fisher Scientific, Waltham, MA). Cell lines were characterized and authenticated via short tandem repeat profiling (PowerPlex HS16 System kit; Promega, Madison, WI) and were passaged for under 6 months after receipt in 2013. Cell lines were routinely tested for mycoplasma contamination using the MycoAlert PLUS Mycoplasma Detection Kit (Lonza, Basel, Switzerland). Primary gastric epithelial cells from gp130F/F mice were generated and cultured using established protocols.57 (link)
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7

Culturing Rat Pheochromocytoma PC12 Cells

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Pheochromocytoma cells were derived from the rat adrenal medulla.17 (link) The PC 12 cell line used in this study was purchased from the American Type Culture Collection (Manassas, VA, USA) and cultured in a complete Gibco™ RPMI medium (Thermo Fisher Scientific, Waltham, MA, USA) supplemented with 10% Gibco™ horse serum (Thermo Fisher Scientific), 5% Gibco™ fetal bovine serum (Thermo Fisher Scientific), and 1% Gibco™ penicillin/streptomycin (Thermo Fisher Scientific). Supplements were stored as aliquots at −20°C. Stock solutions of the PC 12 cells were prepared in a medium containing 90% FBS and 10% dimethyl sulfoxide and stored in liquid nitrogen. The cells were maintained at 37°C with 5% CO2 in a 95% humidified incubator. The medium was changed every 2 days and passaged accordingly when the confluence reached 90%.
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