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Tsq quantum access max mass spectrometer

Manufactured by Thermo Fisher Scientific
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The TSQ Quantum Access Max mass spectrometer is a high-performance triple quadrupole mass spectrometer designed for advanced analytical applications. It provides accurate and sensitive detection of a wide range of molecules, enabling researchers to gain valuable insights from their samples.

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14 protocols using tsq quantum access max mass spectrometer

1

HPLC-MS Analysis of WUE-A4 Compounds

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HPLC-UV/ESI-MS/MS was carried out to characterize the components in WUE-A4 before and after ultrafiltration by using a Thermo Accela 600 series HPLC connected with a TSQ Quantum Access MAX mass spectrometer (Thermo Fisher Scientific, San Jose, CA, USA). A Waters Symmetry RP-C18 column (4.6 × 250 mm, 5 µm) was used to perform chromatographic analysis at 30 °C, and the mobile phase consisted of H2O with 0.1% formic acid (A) and ACN (B). The optimized HPLC elution procedures were as follows: 0–15 min, 17% B; 15–40 min, 17–30% B, 40–42 min: 30–56% B. The flow rate was 0.8 mL/min, the injection volume was 10 µL, and the HPLC-UV chromatograms were detected at a wavelength of 254 nm. The negative ion modes were applied to obtained ESI-MS/MS data. Moreover, the parameters of instrument were set as follows: the vaporizer temperature was 350 °C, the capillary temperature was 250 °C, the spray voltage was 3000 V, the cone voltage energy was 40 V, the collision energy was 10 V, the sheath gas pressure was 40 psi, the aux gas pressure was 10 psi, the drying gas flow rate was 6.0 L/min, and the mass range was set from 50 to 1100 (m/z) in the full-scan mode. Finally, the Thermo Xcalibur ChemStation (Thermo Fisher Scientific) was used for data acquisition and analysis.
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2

Quantifying TMAO-TMA Conversion Pathway

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In the TMAO respiratory pathway, TMAO is reduced to TMA by TMAO reductase. LC-MS/MS was used to detect and quantify TMAO and TMA levels. Bacteria were cultured using the procedure for monitoring cell growth described above. When indicated, 0.1 mM arabinose was added to induce expression. At the indicated times, 200 μL of cell culture was sampled and centrifuged at 15,000 × g for 10 min; the supernatant was then ultrafiltrated by centrifugation with a Pall Nanosep centrifugal device with Omega membrane–10K (Life Science) and then diluted 10 times with double-distilled water. A Thermo Hypersil GOLD aQ column coupled to a Thermo TSQ quantum access MAX mass spectrometer was used for detection. The mobile phase consisted of a mixture of 10 mM ammonium acetate (pH 3.0) as solvent A and ACN as solvent B. A mobile-phase proportion consisting of 60:40 (A:B) was used for detection. The injection volume was 10 μL. The flow rate was 0.1 mL/min. Electrospray ionization (ESI) was used in positive mode. m/z 76.0→58.2, 76.0→42.3, and 76→30.1 were used to monitor precursor-product ion transitions of TMAO, and 60.0→44.4 was used to monitor TMA. The metabolic rate of TMAO was calculated as
peak area of TMA (60.044.4)peak area of TMAO (76.058.2)+ peak area of TMA (60.044.4)
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3

Comprehensive Analytical Characterization of Compounds

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1H-NMR spectra were acquired on an AVANCE III 400 MHz NMR spectrometer (Bruker, Rheinstetten, Germany) in CDCl3. Optical rotations were acquired on a Polaar 3005 Polarimeter (Optical Activity, Huntingdon, Great Britain) using a 2.5 cm cell with a Na 589 nm filter and the concentration of samples was denoted as c. Mass spectra data were acquired on a TSQ Quantum Access Max Mass spectrometer (Thermo Fisher Scientific, Waltham, MA, USA). High-resolution mass spectra (HRMS) were acquired on a LTQ Orbitrap Velos spectrometer (Thermo Scientific) and on a Bruker MicrOTOF. FTIR spectra were acquired on an IR Affinity-1 spectrometer (Shimadzu, Thermo Scientific). Organic solvents used were dried by standard methods when necessary. Commercially available reagents were used without further purification. All reactions were monitored by TLC with silica gel coated plates (EMD/Merck KGaA, Darmstadt, Germany), with visualization by UV light and by charring with 0.1% ninhydrin in EtOH. Column chromatography was performed using Merck 60 Å 70–230 mesh silica gel. The optical density was determined using a Multiskan FC spectrophotometer (Thermo Scientific) at a wavelength of 540 nm when using the MTT assay.
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4

Quantitative Analysis of CIFE Ligands

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The qualitative and quantitative analysis of the potential ligands in CIFE were carried out with the Thermo Accela 600 series HPLC system, which was connected with a TSQ Quantum Access MAX mass spectrometer (Thermo Fisher Scientific, United States). For the HPLC analysis, a Waters Sunfire RP-C18 column (4.6 mm × 150 mm, 5 μm) was employed. 0.1% formic acid—H2O (0.1% FA-H2O, A) and acetonitrile (ACN, B) were used as the mobile phases. The HPLC elution sequences were: 0–2 min, 5%B; 2–30 min, 5%–45% B; 30–35 min, 45%–95% B; 35–40 min, 95%–5%. The flow rate, injection volume, column temperature and UV detection wavelength were set as 800 μL/min, 10 μL, 30°C and 320 nm, respectively. For the ESI-MS/MS analysis, the optimized MS instrument parameters in negative ion mode were: capillary temperature, 350°C; vaporizer temperature, 300°C; spray voltage, 3.0 KV; sheath gas (N2), 40 psi; mass range, m/z 100–1000. The full-scan and data-dependent mode was employed to obtain the mass spectrum data, which was further analyzed with the Thermo Xcalibur ChemStation.
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5

Analytical Techniques for Phytochemical Profiling

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The reaction products were analyzed by an LC-20AT HPLC system (Shimadzu, Kyoto, Japan), using an Inertsil ODS-SP reverse phase column (250 mm × 4.6 mm, 5 μm, Shimadzu) at 25°C. Solvent A was 0.1% formic acid in Milli-Q water, and solvent B was HPLC-grade acetonitrile. The system was equilibrated at 14% B for 10 min, and samples were separated on the column at a flow rate of 0.8 ml/min using a water-acetonitrile gradient in the mobile phase (14–50% B for 35 min, 50–70% B for 2 min, and 70–14% B for 1 min). The assays were monitored at 260 nm for detection of isoflavones and their glucosides, and 280 nm for flavones and their respective glucosides.
Liquid chromatography–mass spectrometry analysis was performed on an Accela LC system coupled with TSQ Quantum Access Max mass spectrometer (Thermo Scientific, USA). The column and analysis method were same with the HPLC analyses as described above. The MS data were recorded with ranges of m/z 100–800. Other parameters were set according to the previous report (Li et al., 2014 (link)).
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6

HPLC-UV and LC-MS/MS Analysis of Alkaloids

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A Thermo Accela 1250 HPLC equipped with an auto-sampler and a UV-visible detector (Thermo Fisher Scientific, San Jose, CA, USA) was employed for the analysis of crude alkaloids. A 10 μL sample was analyzed on a Phenomenex Kinetex column (2.6 μm, C18, 100 × 2.1 mm) at 25 °C. The flow rate was 0.2 mL/min and the chromatograms were recorded at the wavelength of 280 nm. 0.5% formic acid solution (adjusted to pH = 4.5 by ammonium, A) and acetonitrile (B) were selected as mobile phase, and the gradient was set as follows: 0–25 min, 5–20% (B); 25–40 min, 20% (B); 40–55 min, 20–35% (B); 55–65 min, 35–80% (B).
For ESI-MS/MS analysis, a Thermo Accela 600 HPLC system with both UV detector and TSQ Quantum Access MAX mass spectrometer (Thermo Fisher Scientific, San Jose, CA, USA) was used for the LC-MS analysis in the positive mode. The mass condition was set as follows: mass range from 200 to 800 Da; Spray Voltage, 3.0 kV; Capillary temperature, 350 °C; Sheath gas pressure, 40 psi; Aux gar pressure, 10 psi.
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7

Measuring SLF Brain Bioavailability in Mice

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Measurement of SLF brain bioavailability in mice was carried out following the intraperitoneal (IP) injection of three WT mice with 10 mg/kg SLF. Blood was drawn at 20 and 40 min post injection. At 60 minutes post-injection, the animals were sacrificed, and blood and brain harvested. Plasma and brain samples were stored at −80 °C, pending analysis.
Sample separation of plasma and brain tissue was achieved using C18 solid phase extraction cartridges. Eluted fractions were dried under nitrogen and reconstituted in methanol. LC/MS analysis was performed with a Waters Acquity UPLC (Waters, New York, USA) equipped with a Acquity UPLC BEH 1.7 µm C-18 column (Waters, New York, USA) interfaced to a TSQ Quantum Access Max mass spectrometer (MS) (ThermoFisher Scientific, Waltham, MA, USA). An isocratic mobile phase consisting of 20% water and 80% acetonitrile (both containing 0.2% formic acid), with a flow rate of 0.25  mL/min was used for 3 min. Using electrospray ionization MS and selective reaction monitoring (SRM) (capillary temperature 350°C, spray voltage 3000, positive ion mode), SLF was quantified by the product peaks at 258.86, 180.11, 153.07 and 138.20 m/z of its molecular ion peak (412.08, M+H+) and its concentration was calculated with a 10-point calibration curve from 5 nmol/L to 10 µmol/L (see Fig. S2).
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8

LC/MS Analysis of Bioactive Compounds

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LC/MS analysis for SKA‐31, chlorzoxazone, and baclofen was performed with a Waters Acquity UPLC (Waters, NY) interfaced to a TSQ Quantum Access Max mass spectrometer (MS) (Thermo Scientific, Waltham, MA).
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9

HPLC and LC-MS/MS Analysis of Phytochemicals

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For HPLC analyses, samples were detected by an LC-20AT instrument (Shimadzu, Kyoto, Japan) using an inertsil ODS-SP reverse phase column (250 mm × 4.6 mm, 5 μm) at 30°C. The Milli-Q water containing 0.4% phosphoric acid (solvent A) and HPLC-grade methanol (solvent B) were used as the mobile phase. The samples from the reactions with quercetin, kaempferol, and luteolin were separated using 65% B for 45 min at a flow rate of 0.8 ml/min. For other analyses, 0.1% (v/v) formic acid (A) and acetonitrile (B) were used as the mobile phase and samples were separated as follows: 0–30 min, 25–90% B; 30–35 min, 90–25% B; 35–40 min, 25% B and the flow rate was 0.8 ml min-1. The detection wave length was set at 260 nm for isoflavones, 280 nm for liquiritigenin, 350 nm for apigenin and luteolin, and 370 nm for quercetin, kaempferol, and isoliquiritigenin. A calibration standard curve was made from different concentrations (5–100 μg ml-1) of each chemical standard. LC–MS/MS analysis was acquired using Accela LC system with TSQ Quantum Access Max mass spectrometer (Thermo Scientific, Waltham, MA, USA) and electrospray ionization source. The analysis method was same as the HPLC analyses described above. The MS data was recorded in a positive ion mode with the ranges of m/z 50–500. Other parameters were set according to those described previously (Li et al., 2014 (link)).
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10

NMR Characterization of Organic Compounds

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1H-, 13C-, and 2D-NMR spectra were carried out in CDCl3 using a Bruker AM-400 MHz spectrometer (Karlsruhe, Baden-Wuerttemberg, Germany) with TMS as internal standard (IS); δ in ppm and J in Hz. ESI-MS was obtained with a TSQ Quantum Access MAX mass spectrometer (Thermo Fisher Scientific, Waltham, MA, USA). Column chromatography was performed using silica gel (200–300 mesh, Qingdao Marine Chemical Ltd., Qingdao, China), RP-C18 silica gel (150–200 mesh, Merck, Darmstadt, Hesse, Germany) and Sephadex LH-20 (20–100 μm, Sigma, St Louis, MO, USA). FBS (fetal bovine serum) and DMEM (Dulbecco’s Modified Eagle Medium) were purchased from Gibco (Life Technologies, Grand Island, NY, USA). Doxorubicin was provided by Sigma-Aldrich (St Louis, MO, USA). All other chemicals and solvents were of analytical grade.
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