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Thermoscript rt pcr system

Manufactured by Takara Bio

The Thermoscript RT-PCR System is a laboratory equipment designed for Reverse Transcription Polymerase Chain Reaction (RT-PCR) analysis. It performs the essential steps of RNA to cDNA conversion and subsequent amplification of the target cDNA sequence.

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4 protocols using thermoscript rt pcr system

1

RT-PCR Analysis of Liver and HSC Genes

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Total RNA was extracted from rat liver tissues and HSC-T6 cells using TRIzol reagents (Invitrogen). The first-strand cDNA was synthesized from total RNA using Thermoscript RT-PCR System (Takara) according to the manufacturer's instructions. RT-PCR was carried out under standard protocol using the following primers: β-actin (forward: 5'-TGAGCTGCGTGTGGCCCCTGAG-3'; reverse: 5'-GGGGCATCGGAA CCGCTCATTG-3'), TRPV4(forward: 5'-CGCCTCCGCAGGGATCGCTGGTC-3'; reverse: 5'-TGAGCTGGCTTAGGTGACTCCATGGGAGTG-3'), α-SMA (forward: 5'-TGGCCACTGCTGCTTCCTCTTCTT-3'; reverse: 5'-GGGGCCAGCTTCGTCAT ACTCCT-3'), Col1a1: (forward: 5'-TACAGCACGCTTGTGGATG-3'; reverse: 5'-TT GAGTTTGGGTTGTTGGTC-3'). PCR was performed at 94°C for 5 min, followed by 35 or 38 cycles of amplification at 94°C for 36 s, 52 or 60°C for 36 s and 72°C for 1 min by using ABI9700. The band intensities were measured by a densitometer and the results were normalized with β-actin. The results were repeated at least three times independently from three different pools of templates, while each pool of template was extracted from at least three ventricles.
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2

Quantitative RT-PCR Analysis of Gene Expression

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Total RNA was extracted from human HepG2 cell using TRIzol reagents (Invitrogen). The first strand cDNA was synthesized from total RNA using Thermoscript RT-PCR System (Takara) according to the manufacturer's instructions. RT-PCR was carried out understanding protocol using the primers (Table 1). PCR was performed at 94°C for 5 min, following by 30 or 35 cycles of amplification at 94°C for 40 s, 51 or 60°C for 40 s and 72°C for 1 min by using ABI9700. The band intensities were measured by a densitometer and the results were normalized with β-actin. All experiments were performed in triplicate and repeated at least three times.
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3

RNA Extraction and qRT-PCR Analysis

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RNA was prepared using a NucleoSpin RNA isolation kit (Macherey–Nagel), and cDNA was synthesized using the ThermoScript RT-PCR system (Takara). Quantitative real time RT-PCR was performed using a Thermal Cycler Dice Real Time System with SYBR Premix Ex Taq II (Takara). Relative mRNA expression levels of target genes were calculated using glyceraldehyde-3-phosphate dehydrogenase (GAPDH) as an internal control. Primers are listed in Supplementary Table 2.
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4

qRT-PCR Analysis of Centrosomal Proteins

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Procedures for cDNA preparation and qRT-PCR were performed as previously described [23 (link), 29 (link)]. Total RNA was isolated using a NucleoSpin RNA isolation kit (Macherey–Nagel), and then 500 ng total RNA was used for cDNA preparation using a cDNA synthesis kit (ThermoScript RT-PCR system, Takara). Quantitative real time PCR (qPCR) was performed using a Thermal Cycler Dice Real Time System with SYBR Premix Ex Taq II (Takara). The primer sets were as follows: for Nup58, forward: 5′-CACAGCCATCTCTGGGAGTT-3′ and reverse: 5′-GCCAAAGCCTGCACTAAGAC-3′ for Nup62, forward: 5′- ACATCGATGCACAGCTCAAG-3′ and reverse: 5′-ACTGCAGTGAGTCCATGTGC -3′; for SAS-6, forward: 5′-CGCAGGCTGTTTGAAATGTA-3′ and reverse: 5′-TGTATGTGACGCCCATTCAT-3′; for GAPDH, forward: 5′-GTCAGTGGTGGACCTGACCT-3′ and reverse: 5′-AGGGGTTCTACATGGCAACTG-3′. Relative mRNA expression levels of target genes were calculated using GAPDH as an internal control.
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