The largest database of trusted experimental protocols

Ambion gel loading buffer 2

Manufactured by Thermo Fisher Scientific
Sourced in United States

Ambion gel loading buffer II is a ready-to-use solution designed for loading DNA or RNA samples into agarose or polyacrylamide gels. It contains a tracking dye and glycerol, which help to visualize the sample and ensure it sinks into the well, respectively.

Automatically generated - may contain errors

2 protocols using ambion gel loading buffer 2

1

Northern Blotting for miRNA Detection

Check if the same lab product or an alternative is used in the 5 most similar protocols
Northern blotting for miRNA detection was performed with minor modifications as described previously [4 (link)]. Briefly, 10 μg of RNA denatured in Ambion gel loading buffer II (Life technologies) at 75°C for 15 min was loaded and ran on a 15% TBE-Urea gels (Invitrogen, Carlsbad, CA, USA) at 180 V for 1 h. The gel was then transferred onto a nylon membrane using an iBLOT DNA transfer stack (Invitrogen) as per the manufacturer's instructions. Subsequently, the membrane was crosslinked at 1200 kJ using a STRATALINKER (Stratagene, La Jolla, CA, USA). The membrane was then prehybridized in the prehyb buffer (Sigma-Aldrich) at 37°C for 1 h followed by the addition of 1.2 pmol/mL of LNA-modified 5′ and 3′ DIG-labeled hsa-miR-1290 probe (Exiqon) to the buffer and hybridization overnight at 37°C. The next day, the membrane was washed for 5 min with a low stringency wash buffer (2 × SSC, 0.1% SDS) followed by 2 × washes for 20 min each with a high stringency wash buffer (0.5 × SSC, 0.1% SDS) and a final wash for 20 min with ultrahigh stringency wash buffer (0.1 × SSC, 0.1% SDS). After the washes, the membrane was blocked for 1 h with 1 × blocking buffer for 1 h followed by incubation with anti-DIG AP antibody in a 1:  20 000 dilution in blocking buffer. Finally, DIG signal development was carried out using the DIG wash and block buffer set.
+ Open protocol
+ Expand
2

Detecting miRNA Expression by Northern Blotting

Check if the same lab product or an alternative is used in the 5 most similar protocols
Northern blotting for miRNA detection was performed with minor modifications as described previously.46 (link), 47 Briefly, 10 μg of RNA denatured in Ambion gel loading buffer II (Life technologies) at 75°C for 15 min was loaded and ran on a 15% TBE-Urea gels (Invitrogen, Carlsbad, CA, USA) at 180 V for 1 h. The gel was then transferred onto a nylon membrane using an iBLOT DNA transfer stack (Invitrogen) as per the manufacturer's instructions. Subsequently, the membrane was crosslinked at 1200 kJ using a STRATALINKER (Stratagene, La Jolla, CA, USA). The membrane was then prehybridized in the prehyb buffer (Sigma) at 37°C for 1 h followed by addition of 1.2 pmol/ml of LNA-modified 5′ and 3′ DIG-labeled hsa-miR-1290 probe (Exiqon) to the buffer and hybridization overnight at 37°C. The next day, the membrane was washed for 5 min with a low stringency wash buffer (2 × SSC, 0.1% SDS) followed by 2 × washes for 20 min each with a high stringency wash buffer (0.5 × SSC, 0.1% SDS) and a final wash for 20 min with ultrahigh stringency wash buffer (0.1 × SSC, 0.1% SDS). After the washes, the membrane was blocked for 1 h with 1 × blocking buffer for 1 h followed by incubation with Anti-DIG AP antibody in a 1 : 20 000 dilution in blocking buffer. Finally, DIG signal development was carried out using the DIG wash and block buffer set.
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!