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5 protocols using anti β actin antibody

1

Immunoblotting of Polycystin Proteins

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After TEVC recording, oocytes were collected, and protein expression was assessed by Western blot. Oocytes were lysed in the same way as in the co‐IP experiment. Lysate samples were run on 4–12% Bolt Bis‐Tris Plus Gels (Life Technologies) and transferred to PVDF membrane. Rabbit polyclonal anti‐PC1 antibody recognizing aa 4,123–4,291 on the C‐terminus of mouse PC1 29, mouse monoclonal anti‐PC1 N‐terminus antibody 7e12 (Santa Cruz Biotechnology), mouse monoclonal anti‐PC2 (YCE2, Santa Cruz Biotechnology), anti‐HA (BioLegend), anti‐FLAG (Sigma), or anti‐β‐actin antibody (GenScript) were used. Blot signals were visualized with the Molecular Imager ChemiDoc XRS+ Imaging System (Bio‐Rad) or LI‐COR Odyssey.
The protein expression of all mutations tested in this study has been confirmed by Western blot. All Western blots were repeated at least twice.
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2

Tetrahymena Stress Response Protocol

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Wild-type Tetrahymena thermophila strain CU428.2 was grown at 30 °C, shaking at 100 rpm, in super proteose peptone (SPP) medium containing 1% proteose peptone (Becton Dickinson, Sparks, MD, USA), 0.1% yeast extract (Becton Dickinson), 0.2% glucose (Sigma-Aldrich, St. Louis, MO, USA), and 0.003% EDTA-Fe (Sigma-Aldrich). Cells were untreated or treated with 500 μg/mL or 2.5 mg/mL of 1,10-phenanthroline for 1, 5, or 30 min. Cells were collected, then fixed with 10% (w/v) trichloroacetic acid (TCA; Sigma-Aldrich) and incubated on ice for 30 min. After removal of TCA by centrifugation at 12,000× g for 2 min, cell pellets were lysed in PAGE sample buffer (2% SDS ([Sigma-Aldrich], 2.5% 2-mercaptoethanol [Sigma-Aldrich], 10% glycerol [Sigma-Aldrich], and 50 mM Tris-HCl, pH 6.8) and boiled for 5 min prior to analysis by SDS-PAGE and immunoblot. Antibodies used were anti-Tetrahymena SUMO (1:1000; Gift from Jim Forney), or anti-β-actin antibody (1:1000; GenScript, Piscataway, NJ, RRID:AB_914102).
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3

Western Blot Analysis of GFP and HA Proteins

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Total protein was extracted using extraction buffer (50 mM Tris.HCl, pH 6.8, 5% mercaptoethanol, 10% glycerol, 4% SDS, 4 M urea). For western blot analysis, each sample was subjected to SDS‐PAGE and transferred to a nitrocellulose membrane. Reactive proteins were then labelled with antibodies against the GFP protein (Genscript; cat. no. A01704; 1:5000), and against HA (Genscript, cat. no. A01244, 1:10,000). Actin was used as the internal control and labelled with anti‐β‐actin antibody (Genscript, cat. no. A00702, 1:10,000).
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4

Protein Extraction and Western Blot Analysis

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Cells were fixed with 10% (w/v) trichloroacetic acid (TCA; Sigma-Aldrich) to prevent proteolysis and incubated on ice for 30 min. After removal of TCA by centrifugation at 9000 g for 1 min, cell pellets were lysed in PAGE sample buffer (2% SDS ([Sigma-Aldrich], 2.5% 2-mercaptoethanol [Sigma-Aldrich], 10% glycerol [Sigma-Aldrich], and 50 mM Tris-HCl, pH 6.8) and boiled at 98°C for 2 min; 10 μg total protein was loaded into each lane of a 12% polyacrylamide-SDS gel, separated by SDS-PAGE, and transferred onto polyvinylidene fluoride membrane (Merck Millipore). Membranes were washed in blocking buffer (5% dry skimmed milk powder [Sigma-Aldrich] in PBS) and incubated overnight at 4°C with anti-γH2AX (1:1000), anti-FLAG antibody (1:5000; Sigma-Aldrich, RRID:AB_259529), or anti-β-actin antibody (1:1000; GenScript, Piscataway, NJ, RRID:AB_914102). After washing in PBS-T (0.05% Tween 20 [Sigma-Aldrich] in PBS), membranes were incubated in PBS-T containing horseradish peroxidase-conjugated goat anti-mouse IgG antibody (1:5000; Thermo Fisher Scientific, Waltham, MA, RRID:AB_228307) for 1 hr at room temperature. Membranes were washed with PBS-T and developed using Clarity Western ECL (Bio-Rad, Hercules, CA).
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5

Immunoblotting Analysis of IRF7 and Associated Proteins

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Antibody against IRF7 was purchased from Cell Signaling Technology (CST) (Beverly, MA, USA). Mouse anti-Flag antibody was purchased from Sigma-Aldrich (St. Louis, MO, USA). Mouse anti-glyceraldehyde 3-phosphate dehydrogenase (GAPDH) monoclonal antibody and anti-β-actin antibody were purchased from GenScript (Piscataway, NJ, USA). Horseradish peroxidase (HRP)-conjugated labeled Goat anti-mouse IgG secondary antibody was purchased from Jackson Immuno Research (West Grove, PA, USA). miR-541-3p mimics and inhibitors were purchased from Qiagen (Valencia, CA, USA). Polyinosinic-polycytidylic acid (poly(I:C)) was purchased from Sigma-Aldrich (St. Louis, MO, USA). Lipofectamine 2000 transfection reagent was purchased from Invitrogen (Carlsbad, CA, USA).
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