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Cms l compact mass spectrometer

Manufactured by Advion
Sourced in United States

The CMS-L Compact Mass Spectrometer is a laboratory instrument designed for the detection and analysis of chemical compounds. It utilizes mass spectrometry technology to separate and identify molecules based on their mass-to-charge ratio. The core function of the CMS-L is to provide accurate and precise measurements of the molecular composition of various samples.

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6 protocols using cms l compact mass spectrometer

1

Synthesis and Characterization of Organic Compounds

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The purity of all final compounds was >95 % purity as assessed by HPLC. Final compounds were analyzed on an Agilent 1200 series chromatograph. The chromatographic method utilized as ThermoScientific Hypersil GOLD C-18 4.6 × 250 mm, 3 μm column. UV detection wavelength = 220 nm; flow-rate = 1.0 mL/min; gradient = 5 - 95% acetonitrile over 12 min and 3 min hold time at 95% acetonitrile. Both organic and aqueous mobile phases contain 0.1% v/v formic acid. The mass spectrometer used is an AB Sciex 4500 QTrap triple-quadrupole mass spectrometer with an ESI source or an Advion CMS-L Compact Mass Spectrometer with an ESI or an APCI source. Samples are submitted for analysis solubilized in 1:1 acetonitrile:water solution or using the atmospheric solids analysis probe (ASAP). 1H and 13C NMR spectra were recorded on either Bruker DRX500 spectrometer (operating at 500 and 125 MHz, respectively) or Bruker AVIII (operating at 800 and 200 MHz, respectively) in DMSO-d6 or CDCl3 with or without the internal standard of TMS at 0.05% v/v. The chemical shifts (δ) reported as parts per million (ppm) and the coupling constants are reported as s = singlet, bs = broad singlet, d = doublet, t = triplet, q = quartet, dd = doublet of doublet, m = multiplet. Compounds were generally prepared according to scheme 1 and protocols are detailed below. Intermediate 4C was commercially available.
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2

Synthesis and Characterization of Compound 1

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The purity of all final compounds was ascertained via HPLC on an Agilent 1200 series chromatograph >95%. Chromatographic methods utilized include a ThermoScientific Hypersil GOLD C-18 4.5 × 250 mm, 3 μm column, UV detection at a wavelength of 254 nm, flow rate set to 1.0 mL/min, and with an acetonitrile: water gradient from 5 to 95% acetonitrile over 12 min with a 3 min hold time at 95%. Both acetonitrile and water contained 0.1% v/v formic acid. Mass spectrometry was obtained on an Advion CMS-L Compact Mass Spectrometer with an atmospheric pressure chemical ionization (APCI) or electrospray ionization (ESI) source on normal or low fragmentation settings. 1H and 13C NMR spectra were recorded on either a Bruker DRX500 spectrometer or a Bruker AVIII in CDCl3, DMSO-d6, or methanol-d4 with the internal standard of TMS at 0.05% v/v. Chemical shifts (δ) reported below are as parts per million (ppm) and the coupling constants are reported as follows: s = singlet, d = doublet, t = triplet, q = quartet, p = pentet, h = hextet, hept = heptet, dd = doublet of doublets, ddd = doublet of doublet of doublets, and m = multiplet. Protocols for each compound are detailed below. Compounds were prepared according to Scheme 1 and a protocol is detailed below for compound 1. All other compound synthesis and characterization data are provided in the Supporting Information.
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3

NMR and HPLC Characterization of Compounds

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1H and 13C NMR spectra were recorded on Bruker DRX500 spectrometer (operating at 500 and 126 MHz) in DMSO-d6 or CDCL3 with or without the internal standard of TMS at 0.05% v/v. The chemical shifts (d) reported as parts per million (ppm) and the coupling constants are reported as s = singlet, bs = broad singlet, d = doublet, t = triplet, q = quartet, dd = doublet of doublet, m = multiplet. The purity of all final compounds was >95 % purity as assessed by HPLC according to current American Chemical Society guidelines for publication. Final compounds were analyzed on an Agilent 1200 series chromatograph. The chromatographic method utilized as ThermoScientific Hypersil GOLD C-18 or silica column. UV detection wavelength = 220/254 nm; flow-rate = 1.0 mL/min; solvent = acetonitrile/water for reverse phase. Both organic and aqueous mobile phases contain 0.1% v/v formic acid. The mass spectrometer used is an Advion CMS-L Compact Mass Spectrometer with an ESI or an APCI source. Samples are submitted for analysis using the atmospheric solids analysis probe (ASAP). Compounds were prepared according to following protocols and are detailed below.
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4

Detailed Spectroscopic Analysis of Compounds

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1H, 13C, and 19F NMR spectra were recorded on Bruker DRX500 or ARX-800 spectrometers in [D6] DMSO or CDCl3 with or without the internal standard of TMS at 0.05 or 0.1% v/v. The purity of all final compounds was >95% purity as assessed by HPLC. Final compounds were analyzed on an Agilent 1200 series chromatograph. The chromatographic methods used were either (A) ThermoScientific Hypersil GOLD C18 column (3 µM particle size, 150 mm length, 4.6 mm ID) or (B) ThermoScientific Hypersil GOLD C18 column (3 µM particle size, 250 mm length, 4.6 mm ID). UV detection wavelength = 254 nm; flow rate = 1.0 mL min−1; solvents: (A) water (0.1% trifluoroacetic acid v/v) and (B) acetonitrile (0.1% trifluoroacetic acid v/v). Gradient: 5–95% solvent B over 9 min [40 (link)]. The mass spectrometer used is an Advion CMS-L Compact Mass Spectrometer with an ESI or an APCI ionization source. Samples are submitted for analysis using either the atmospheric solids analysis probe (ASAP) or flow injection analysis (FIA). Compounds were prepared according to the following protocols and are detailed in the Supplementary Material.
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5

Spectroscopic and HPLC Characterization

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1H-, 13C- and 19F-NMR spectra were recorded on DRX500 or ARX-800 spectrometers (Bruker, Billerica, MA, USA) in [D6] DMSO or CDCl3 with or without the internal standard of TMS at 0.05 or 0.1% v/v. The purity of all final compounds was > 95% purity as assessed by HPLC. Final compounds were analyzed on a 1200 series chromatograph (Agilent, Santa Clara, CA, USA). The chromatographic methods used were either: (A) Hypersil GOLD C18 column (Thermo Scientific, Waltham, MA, USA) 3 µM particle size, 150 mm length, 4.6 mm ID) or (B) a Thermo Scientific Hypersil GOLD C18 column (3 µM particle size, 250 mm length, 4.6 mm ID). UV detection wavelength = 254 nm; flow rate = 1.0 mL min−1; solvent = acetonitrile/water. Both organic and aqueous mobile phase contain 0.1% v/v trifluoroacetic acid. The mass spectrometer used is a CMS-L Compact Mass Spectrometer (Advion, Ithaca, NY, USA) with an ESI or an APCI ionization source. Samples are submitted for analysis using either the atmospheric solids analysis probe (ASAP) or flow injection analysis (FIA). Compounds were prepared according to the following protocols and are detailed below. Intermediates 13a (Catalog #V4659, AK Scientific, Union City, CA, USA) and 13b (Catalog #7975AH, AK Scientific) were purchased from commercial vendors. These intermediates were left in Scheme 3 for continuity.
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6

Synthesis and Characterization of Compound 4

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1H and 13C NMR spectra were recorded on Bruker DRX500 spectrometer (operating at 500 and 126 MHz) in DMSO-d6 with or without the internal standard of TMS at 0.05% v/v. The chemical shifts (δ) are reported as parts per million (ppm). The purity of all final compounds was >95% purity as assessed by HPLC according to current American Chemical Society guidelines for publication. Final compounds were analyzed on an Agilent 1200 series chromatograph. The chromatographic method utilized as Thermo Scientific Hypersil GOLD C-18 or silica column. UV detection wavelength=220/254 nm; flow-rate=1.0 mL/min; solvent=acetonitrile/water for reverse phase and ethyl acetate/hexane for normal phase. Both organic and aqueous mobile phases contain 0.1% v/v formic acid. The mass spectrometer used is an Advion CMS-L Compact Mass Spectrometer with an APCI source. Samples are submitted for analysis using the atmospheric solids analysis probe (ASAP). Compounds were prepared according to scheme 1 and protocol is detailed below for compound 4. All other compound synthesis and characterization data is provided in the supporting information.
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