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11 protocols using bile salt

1

Bile Tolerance of Enterococcus durans

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According to the method of Vinderola and
Reinheimer, (2003)
, E. durans F3 was tested for
its ability to survive in the presence of bile salts. Log phase culture of
E. durans F3 was inoculated (2% v/v) into MRS
broth supplemented with 0.2%, 0.5%, 1.0%, 1.5%,
2%, and 2.5% (w/v) of bile salt (Hi-Media®,
India) and control culture (without bile salts) with incubation at
37°C for 24 h. Percentage of growth was then calculated after OD was
measured at 560 nm.
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2

Acid and Bile Tolerance of L. brevis

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L. brevis F064A was aerobically grown in MRS broth at 37 °C for 24 h. Tolerance to an acidic condition was examined by adjusting MRS broth to pH 2.0 and pH 3.0 with hydrochloric acid [25 (link)]. Tolerance to bile salts was examined in MRS broth supplemented with 0.3% (w/v) of bile salts (Himedia® Laboratories, Mumbai, India). Initial suspension of L. brevis F064A was prepared up to 106–108 colony-forming units (CFU)/mL (OD625 = 0.08–0.1) before inoculation [26 (link)]. Determination of viable cell count was undertaken every 1 h for 6 h on MRS agar as described by Shekh et al. [25 (link)] with slight modifications.
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3

Actinomycete Tolerance Assay

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Five milliliters of ISP2 broth with pH ranges from 2 to 7 or 0.3% bile salt was prepared by adding 0.1 M HCl or bile salt (Himedia, India) to the ISP2 broth before sterilization with an autoclave. From the five strains with consistent antibacterial activity (YNW004, SHS004, LNW002, ZNW001, and TNW007), only one loop of each actinomycete strain was inoculated to the adjusted pH or bile salt-containing media. After incubation in the incubator shaker at room temperature with 200 rpm for 2 hours, one hundred microliters of the culture broth was spread on the ISP2 agar and incubated at room temperature for 7 days. The level of the tolerance was evaluated by counting the observed actinomycete colonies: 1-100 colonies represented +, 101-200 colonies represented ++, and more than 200 colonies represented +++, while none of the colony represented -.
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4

Acid and Bile Tolerance of Bacillus Strains

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The acid and bile tolerance of B. coagulans B37 and B. pumilus B9 strains were assessed as per the methods described previously [20 ,21 ]. Different low pH solutions were prepared to stimulate gastric acidic conditions by adding reagent grade HCl (35.8%) in distilled water drop by drop in a beaker and solutions having pH of 1.0, 2.0, and 3.0 were obtained. Sterile distilled water (pH adjusted to 6.5) was served as control. High bile salt solutions (1.0% and 2.0%) were prepared by dissolving bile salts (Hi-media, India) in distilled water. 1 ml of fresh culture containing approximately 107-108 cfu/ml was added to the different pH solutions (1.0, 2.0, 3.0, and 6.5) as well as bile solutions (1.0% and 2.0%) and mixed thoroughly. 1 ml of each solution was taken from each tube immediately (0 h) and 10-fold serial dilutions were prepared in 0.1% peptone water. Pour plating was done on BC agar media. The inoculated pH solutions were incubated at 37°C for 3 h, and 1 ml of culture was taken hourly from each tube after an interval of 1, 2, and 3 h of incubation followed by plating. The bile solutions containing cultures were incubated at 37°C for 12 h, and 1 ml of bile solution containing culture was taken from each tube after 1, 3, and 12 h of incubation and plated on BCA. All plates were incubated at 37°Cfor 24-72 h and the cfu were counted.
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5

Simulated Biofluids Analysis Protocol

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All chemicals used for the analysis of simulated salivary fluids, simulated gastric fluids and simulated intestinal fluids were of analytical grade and were made available from RCI Labscan (Bangkok, Thailand). Salivary α-amylase and pancreatin were purchased from Sigma-Aldrich (St. Louis, MO, USA). Bile salts, hemin, vitamin K1, cysteine HCl and the appropriate media were purchased from HiMedia (Nashik, India). Standard short chain fatty acids (SCFA), including propionic acid, butyric acid, acetic acid and lactic acid, were of HPLC grade and were obtained from RCI Labscan.
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6

Acid and Bile Tolerance of YB1701

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The acid and bile tolerance of YB1701 was determined as described by Duc et al. 2004. [42 (link)] with some modifications. Different pH solutions (2.0, 3.0, and 6.5) were prepared to stimulate gastric acidic conditions by adding reagent grade HCl (35.8%) in LB medium and supplemented with pepsin from porcine gastric mucosa (Sigma-Aldric P7000, Buchs, Switzerland) at 1 mg/mL. High bile salt solutions (1.0% and 2.0%) were prepared by dissolving bile salts (Hi-media, Mumbai, India) in LB medium. One milliliter of fresh culture containing approximately 107–108 CFU/mL was added to the different pH solutions as well as the bile solutions and was mixed thoroughly. Cultures were then incubated at 37 °C with agitation and aliquots were removed after 30, 60 and 90 min for acid tolerance, and after 1 and 3 h for bile salt tolerance. Serial dilution was done in sterile saline (0.9% w/v) and the viable count was enumerated by plating on an LB agar plate. Bacterial cell survival was calculated as follows: NA/NB × 100%, where NA = log10 CFU/mL after incubation and NB = log10 CFU/mL before incubation.
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7

Bile Salts and Oxyresveratrol Impact on Viability

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MRS medium with 0.15 and 1.0% (w/v) bile salts was used (HiMedia, Mumbai, India). A total of 20 µL of 0.1 OD600 adjusted culture was inoculated into 180 µL of MRS broth with bile salts and oxyresveratrol at specific MIC concentrations in 96-well plates and incubated at 37 °C. Viable counts after exposure to 3 h (log CFU/mL) were determined [20 (link),21 (link)].
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8

Fabrication of Asymmetric Membranes with Antimicrobial Properties

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Polyvinylidene uoride (MW = 573 KDa, Solef, Solvay, France), polyester fabric (Filtration Sciences Corporation, USA), N, N dimethyl formamide (Qualigen, India), D-(+)-Glucose anhydrous (Hi media, India), Graphene oxide (Sigma-Aldrich) and 2, 3, 5-Triphenyltetrazolium chloride (≥ 99.0% SIGMA, Life Science) were used to prepare the asymmetric membranes. Reverse osmosis treated water was used for the membrane preparation.
Nutrient Agar, Nutrient Broth, Luria-Bertani Broth and TCBS Agar (Hi media, India) were used for all microbiology studies. Escherichia coli (NCIM2065), Bacillus subtilis (NCIM2920), Vibrio cholerae (N16961), Vibrio parahaemolyticus (IDH02640), Vibrio campbellii, Vibrio harveyi, Vibrio proteolyticus (Isolated from seawater and identi ed in our laboratory) were used for testing and evaluating the vibrio kit. Also, commercial probiotic containing Paracoccus pantotrophus (PondDtox, Novozymes) was used to test the vibrio kit.
Casein enzymic hydrolysate, Yeast extract, Proteose peptone, Sucrose, Sodium thiosulphate, Sodium citrate, Sodium deoxycholate, Sodium chloride, Oxgall, Sodium lauryl sulphate, Bile salts and Potassium tellurite (HiMedia, India) were used to prepare Vibrio selective medium.
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9

Fabrication of Asymmetric Membranes with Antimicrobial Properties

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Polyvinylidene uoride (MW = 573 KDa, Solef, Solvay, France), polyester fabric (Filtration Sciences Corporation, USA), N, N dimethyl formamide (Qualigen, India), D-(+)-Glucose anhydrous (Hi media, India), Graphene oxide (Sigma-Aldrich) and 2, 3, 5-Triphenyltetrazolium chloride (≥ 99.0% SIGMA, Life Science) were used to prepare the asymmetric membranes. Reverse osmosis treated water was used for the membrane preparation.
Nutrient Agar, Nutrient Broth, Luria-Bertani Broth and TCBS Agar (Hi media, India) were used for all microbiology studies. Escherichia coli (NCIM2065), Bacillus subtilis (NCIM2920), Vibrio cholerae (N16961), Vibrio parahaemolyticus (IDH02640), Vibrio campbellii, Vibrio harveyi, Vibrio proteolyticus (Isolated from seawater and identi ed in our laboratory) were used for testing and evaluating the vibrio kit. Also, commercial probiotic containing Paracoccus pantotrophus (PondDtox, Novozymes) was used to test the vibrio kit.
Casein enzymic hydrolysate, Yeast extract, Proteose peptone, Sucrose, Sodium thiosulphate, Sodium citrate, Sodium deoxycholate, Sodium chloride, Oxgall, Sodium lauryl sulphate, Bile salts and Potassium tellurite (HiMedia, India) were used to prepare Vibrio selective medium.
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10

Bile Tolerance Assay for Bacterial Viability

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The bile tolerance test was conducted according to the method described by Gilliland et al. (1984) . 100 µl of overnight grown bacterial culture was inoculated in MRS broth containing 0.3 % bile salts (Himedia Pvt. Ltd) and incubated at 37 ºC for 4 hrs. After the incubation period, 100 µl of the bacterial sample was spread onto MRS agar plate to determine the viability of bacteria in 0.3 % bile. Samples were also inoculated in MRS broth without bile, which acts as a control. Growth at a different time interval and percentage resistance of bacteria was determined by measuring the absorbance of MRS broth at 600 nm.
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