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4 protocols using anti iκb α sc 1643

1

Antidepressants and Stimulants Modulate Kinase Activation

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Western blot analysis was conducted to determine the level of kinase activation. Cell lysates were collected. One hour after the treatment of HaCaT cells with antidepressants (Flu 0.1 and 0.5 µM; Des 1 and 5 µM; Imi 1 µM) and stimulants (LPS: 3 µg/ml; TNF-α/IFN-γ: 10 ng/ml; DNFB: 1 µM), samples containing an equal amount of protein were separated by SDS–PAGE (4–20% gel; Bio-Rad, Hercules, CA, USA) and transferred to PVDF membranes (Trans-Blot Turbo; Bio-Rad, Hercules, CA, USA). After the transfer, the membranes were cut to allow simultaneous (overnight at 4 °C) incubation with different primary antibodies (anti-NFκB p65 (sc-372), anti-phospho-NFκB p65 (sc-33020), anti-IκB-α (sc-1643), anti-phospho-IκB-α (sc-8404), anti-NIK (sc-7211), anti-phospho-NIK (sc-12957), anti-p38 (sc-7972), and anti-phospho-p38 (sc-101759)) obtained from Santa Cruz Biotechnology (USA) and anti-GAPDH (MAB374, Millipore, USA). The next day, the membranes were washed four times with TBS containing 0.1% Tween-20 (TBST) and then incubated with appropriate secondary antibodies (Vector Laboratories, UK) for 1 h at room temperature. The immunoblots were visualized with a chemiluminescence detection kit (Roche, Germany). The data obtained were normalized to the level of reference proteins and then averaged and presented as a percentage of control ± SEM, from at least three independent experiments.
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2

Immunoblotting and Immunofluorescence Antibodies for Cell Signaling

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Anti-PC2 (sc-47734; for immunoblotting), anti-NFκB (sc-8008), and anti-IκBα (sc-1643) antibodies were purchased from Santa Cruz Biotechnology. Anti-PC2 antibody for immunofluorescent imaging was a kind gift from Dr. Stefan Somlo (Yale). Mouse anti-beta-Actin (#3700), rabbit anti-beta-Actin (#4970), anti-CHOP (#2895), anti-cleaved caspase-3 (#9664), and anti-GAPDH (#2118) antibodies were purchased from Cell Signaling Technology. Anti-4-Hydroxynonenal (ab48506), anti-eIF2α (ab50733), anti-phospho-eIF2α (ab32157) antibodies, and kainic acid (ab120100) were purchased from Abcam. Anti-VDAC (PA1-954A) antibody was purchased from Thermo Fisher Scientific. Hydrogen peroxide (H325-100) and BAPTA-AM (B1205) were purchased from Thermo Fisher Scientific. Tunicamycin (T7765), and Dimethyl sulfoxide (DMSO; W387520) were purchased from Sigma-Aldrich.
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3

Analysis of Cardiac Protein Expression

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Isolated heart tissue was homogenized in radioimmune precipitation assay buffer containing protease and phosphatase inhibitors (Pierce Protease and Phosphatase Inhibitor Mini Tablets, Thermo Scientific). 30–50 μg of total protein extract was applied to SDS-PAGE and transferred onto PVDF membranes. Antibodies used for this study include anti-IκBα (sc-1643, Santa Cruz), anti-phosphoIκBα at Ser-32 (sc-7977, Santa Cruz), anti-LC3B (Sigma L7543), anti-MCU (Cell Signaling D2Z3B), anti-MICU1[21 (link)], and anti-ATP5A (Santa Cruz sc-136178).
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4

Western Blot Analysis of Signaling Pathways

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Equal amounts of protein were separated by sodium dodecyl sulfate-polyacrylamide gel electrophoresis on 9% or 12% gels. The proteins were electrophoretically transferred onto nitrocellulose membranes using a Bio-Rad Mini Protean II apparatus (Bio-Rad). The blots were blocked with 5% milk in PBS-T (80-mM Na2HPO4, 20-mM NaH2PO4, 100-mM NaCl, and 0.1% Tween-20 [pH 7.5]) for 2 hours. Anti-Bcl-2 (3498), anti-Bax (2772), anti-cleaved caspase 3 (9661), anti-phospho extracellular signal-regulated kinase (p-ERK) (9101), anti-phospho-p38 mitogen-activated protein kinase (p-p38 MAPK) (4631), and anti-phospho JNK (p-JNK) (9251) antibodies (Cell Signaling Technology) were used. Phospho-NF-κB p65 (sc-33020; Santa Cruz Biotechnology), anti-NF-κB p65 (8242; Cell Signaling Technology), anti-IκBα (SC-1643; Santa Cruz Biotechnology), and anti-β-actin (a5316; Sigma) antibodies were diluted in blocking buffer and incubated with the blots overnight at 4 °C. The blots were then washed and incubated with peroxidase-conjugated secondary antibody (1:3,000). The selected bands were scanned (GS-700 Imaging Densitometry; Bio-Rad) and the density was determined (Molecular Analyst version 1.5; Bio-Rad).
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