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4 protocols using anti citrate synthase

1

Immunofluorescence Staining of Brain Sections

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Paraformaldehyde fixed frozen brain sections or BMVECs grown on slides were subsequently washed with TBS followed by treatment with 0.2% Triton X-100 for 3 minutes. After washing, samples were blocked by 5% BSA for 1 hour at room temperature. Slides were then incubated with primary antibodies like anti-IREB2 (iron responsive element binding protein 2) (ab181153, Abcam), anti-4 hydroxynonenal (anti-4HNE) (ab46545, Abcam), anti-TLR4 (toll like receptor 4) (ab22048, Abcam) and anti-citrate synthase (14309, Cell Signaling) at a 1:100 dilution in 0.2% BSA at 4°C overnight. Cells were washed and incubated with AlexaFlour 488 conjugated secondary antibody (Jackson Immuno Research Laboratories, Inc., West Grove, PA) at a 1:400 dilution at room temperature for 1 hour. Negative control slides were incubated with 0.2% BSA in place of the primary antibody. Slides were imaged on Axiovert 200 microscope (Carl Zeiss MicroImaging, Thornwood, NY).
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2

Western Blot Analysis of Mitophagy Regulators

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Western blotting was performed as previously described14 (link). Antibodies used in this study include: anti-PPTC7 (Novus Biologicals, catalog #NBP1-90654, 1:1000 dilution, 48 h incubation), anti-Citrate synthase (Cell Signaling Technologies, catalog #14309, 1:1000 dilution, overnight incubation), anti-beta actin (Abcam, catalog # ab170325, 1:1000 dilution, overnight incubation), anti-BNIP3 (rodent specific antibody, Cell Signaling Technologies, catalog #3769, 1:1000 dilution, 48 h incubation), anti-NIX (Cell Signaling Technologies, catalog #12396, 1:1000 dilution, overnight incubation), and anti-LC3B (Cell Signaling Technologies, catalog #3868, 1:1000 dilution, overnight incubation). For the immunoprecipitations, the following antibodies were used: anti-BNIP3 (Abcam, clone EPR4034, catalog #ab109362, WB 1:1000), anti-NIX (Cell Signaling Technology, clone D4R4B, catalog #12396, WB 1:1000); anti-FLAG (Sigma-Aldrich, catalog #SAB4301135, WB 1:1000), and anti-vinculin (SCBT, clone G-11; sc-55465, WB 1:1000).
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3

Western Blotting of Mitochondrial Proteins

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Western blotting was performed as previously described (Niemi et al., 2019 (link)). Antibodies used in this study include: anti-Pptc7 (Novus Biologicals, catalog #NBP1-90654, 1:1000 dilution, 48 hour incubation), anti-Citrate synthase (Cell Signaling Technologies, catalog #14309, 1:1000 dilution, overnight incubation), anti-beta actin (Abcam, catalog # ab170325, 1:1000 dilution, overnight incubation), anti-Bnip3 (rodent specific antibody, Cell Signaling Technologies, catalog #3769, 1:1000 dilution, 48 hour incubation), and anti-Nix (Cell Signaling Technologies, catalog #12396, 1:1000 dilution, overnight incubation).
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4

Immunoblotting Analysis of Cellular Signaling

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All biochemical reagents were purchased from Sigma-Aldrich unless otherwise indicated. Antibodies against, JNK1 (SC-1648, 1:2500), Dicer (SC-30226, 1:2500), Akt (SC-8312, 1:2500), phospho-Akt (Ser473) (SC-7985-R, 1:2500), PGC-1α (SC-13067, 1:2500), β-actin (SC-130656, 1:5000), and β-tubulin (SC-9104, 1:5000) were from Santa Cruz Biotechnology. Anti-Acc (3662, 1:2500), anti-phospho-Acc (Ser79) (11818, 1:2500), Anti-AMPKα (5832, 1:2500), Anti-phospho-AMPKα (Thr172) (2535, 1:2500), anti-AMPKβ (4250, 1:2500), anti-phospho-AMPKβ (Ser108) (4181, 1:2500), anti-phospho-ULK1 (Ser555) (5869, 1:2500), anti-phospho-ULK1 (Ser317) (12753, 1:2500), anti-ULK1 (8054, 1:2500), anti-phospho-MFF (Ser146) (49281, 1:2500), anti-MFF (86668, 1:2500), anti-Ago2 (2897, 1:2500), anti-Ago1 (5053, 1:2500), anti-S6 Ribosomal Protein (2217, 1:2500) and anti-phospho-JNK (Thr183/Tyr185) (1:2500), anti-Albumin (4929, 1:2500), anti-Citrate Synthase (14309, 1:2500), Anti-AMPKα1 (2795, 1:2500) were purchased from Cell Signaling Technology. Anti-IRS1 (1:2500) and anti-phospho-IRS (Ser307) (07247, 1:2500) antibodies were purchased from Upstate Biotechnology. Anti-AMPKα1 (32047, 1:2500) was purchased from Abcam.
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