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13 protocols using sk hep 1 cells

1

Cell Line Characterization for Cancer Research

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HEK293T (ATCC, no. CRL-3216), NCI-H226 (ATCC, no. CRL-5826), MSTO-211H (ATCC, no. CRL-2081), NCI-H2452 (ATCC, no. CRL-5946) mesothelioma cells, MeT-5A (ATCC, no. CRL-9444) mesothelium cells, 94T778 cells (ATCC, no. CRL-3044), 93T449 cells (ATCC, no. 3043), MIA PaCa-2 cells (ATCC, no. CRM-CRL-1420), MM.1S (ATCC, no. CRL-2974) and SKHEP-1 cells (ATCC, no. HTB-52) were obtained from American Type Culture Collection and cultured as recommended. HuCCT1 cells were gifts from Bardeesy lab in Massachusetts General Hospital. PC9 cells were gifts from Pasi lab in Dana-Farber Cancer Institute. Cells were negative for mycoplasma using MycoAlert mycoplasma detection kit (LONZA, no. LT07-418).
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2

Comprehensive cancer cell line study

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Human NSCLC A549 cells, breast adenocarcinoma MCF7 cells, colorectal adenocarcinoma HT-29 cells, pancreas ductal adenocarcinoma PANC-1 cells, and hepatic adenocarcinoma SK-HEP-1 cells were purchased from ATCC and propagated according to ATCC specified conditions. Sunitinib, imatinib, sorafenib, gefitinib, erlotinib, paclitaxel, cisplatin, doxorubicin and ATP were purchased from Sigma. Nonhydrolyzable fluorescent ATP (NHF-ATP) was from Jena Bioscience (Germany). High molecular weight fluorescent dextran (HMWFD) was from Invitrogen. Antibodies against phosphorylated and total Akt, mTOR, ERK1/2, PAK1, cleaved PARP, cyclin D1 and β-actin were from Cell Signaling. Antibodies against phosphorylated and total PDGFRα, c-Raf and MEK were from Santa Cruz Biotechnology.
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3

Fatty acid treatment of liver cell lines

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HEK293T cells (ATCC: CRL-3216), HepG2 cells (ATCC: HB-8065), PLC/PRF/5 cells (ATCC: CRL-8024), and SK-Hep1 cells (ATCC: HTB-52) were purchased from American Type Culture Collection (ATCC, USA). HL-7702, Bel-7402, and SMMC-7721 cells were generous gifts from Dr. Qinfeng Yan, Zhejiang University. Hepa1-6 cells were purchased from Procell Life Science & Technology, China. All the cell lines were maintained in Dulbecco’s modified Eagle’s medium (DMEM, BasalMedia, China) supplemented with 10% fetal bovine serum (FBS, EXCEL, China) and 1% penicillin and streptomycin (Thermo Fisher Scientific, USA) at 37 °C in 5% CO2 (v/v). The cell lines were routinely tested for mycoplasma contamination and were tested negative.
PO (0.4 mM palmitic acid and 0.8 mM oleic acid) treatment in indicating time was performed according to previous studies (Ge et al, 2022 (link); Li et al, 2021 (link); Wang et al, 2022 (link)).
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4

Confocal Imaging of CnB Localization

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Confocal microscopy was performed using a Zeiss LSM700 laser scanning confocal microscope. The SK-HEP-1 cells (ATCC) or 293 cells (Life technologies) were seeded on a 35-mm glass-bottom dish (D35-20-1-N, In Vitro Scientific) and transfected with the indicated plasmids for 48 h. 5 μM CnB-GFP or rhodamine-conjugated CnB was then added to the cells and incubated for 30 min, followed by three washes with PBS or acid-stripping buffer. The localization of the fluorescence was determined.
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5

Liver Cancer Cell Metabolism: Starvation Experiments

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SK-Hep-1 cells were purchased from American Type Culture Collection (VA, USA), and Hep3B, Huh-7, HepG2, SNU-475, and SNU-449 cell lines were obtained from the Korean Cell Line Bank (Seoul, Korea). The cell lines were tested for mycoplasma contamination (MycoAlertTM Mycoplasma Detection Kit, LONZA, Rockland, ME, USA). Lysates of normal human liver tissue were purchased from Novus (CO, USA). All culture media were obtained from Welgene (Gyeongbuk, Korea). Liver cancer cells were maintained at 37 °C in 5% CO2 and cultured in Dulbecco’s Modified Eagle’s Medium or RPMI 1640 supplemented with 10% fetal bovine serum, 100 units/ml of penicillin, and 100 µg/ml streptomycin. Cells were exposed to 10 µM methionine medium for 24 h prior to incubation in Hank’s balanced salt solution (HBSS) for amino acid starvation and in glucose-null or high-glucose medium (as the control) for glucose starvation.
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6

HepG2 and SK-HEP-1 Cell Culture

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The HepG2 and SK-HEP-1 cells were obtained from American Type Culture Collection (Manassas, VA, USA) and grown in DMEM supplemented with 10% heat-inactivated FBS, penicillin (100 units/mL), and streptomycin sulfate (100 μg/mL) at 37 °C in an atmosphere of 5% CO2.
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7

Culturing Liver Cancer and Normal Cells

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Liver cancer SK-HEP-1 cells and FL83B normal hepatocytes were procured from American Type Culture Collection. Both these cell lines were maintained in Dulbecco’s modified Eagle’s medium containing 10% fetal bovine serum, antibodies (100 units/mL penicillin and 100 μg/mL streptomycin), and 2 mM glutamine. The cells were cultured in an incubator (Thermo Scientific) at 37°C with 98% humidity and 5% CO2.
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8

Hepatocellular Carcinoma Cell Lines

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Five HCC cell lines were used in subsequent experimental investigations. SK-Hep-1 cells were purchased from the American Type Culture Collection (Rockville, MD, USA). Huh-7 cells were a gift from Dr. Hui-Ling Chiou (Chung Shan Medical University, Taichung, Taiwan). HepG2, PLC/PRF/5, and HA22T/VGH cells were purchased from the Bioresource Collection and Research Center and the Food Industry Research and Development Institute (Hsinchu, Taiwan). The SK-Hep-1, HuH-7, and HA22T/VGH cells were cultured in Dulbecco's modified Eagle's medium (DMEM), whereas the PLC/PRF/5 and HepG2 cells were cultured in minimum essential medium. The PLC/PRF/5 and HepG2 cells were supplemented with 10% fetal bovine serum (Hyclone Laboratories, Logan, UT, USA), 100 μg/mL NEAA, and 100 mg/mL penicillin-streptomycin (Sigma Chemicals, St. Louis, MO, USA). These cell lines were maintained in a humidified atmosphere containing 5% CO2 at 37 °C.
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9

Culturing HepG2 and SK-HEP-1 Cells

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HepG2 and SK-HEP-1 cells, obtained from the American Type Culture Collection (Manassas, VA, USA), were cultured in Dulbecco's modified Eagle's medium (DMEM; Gibco BRL, Grand Island, NY, USA) supplemented with 10% fetal bovine serum (FBS; Sijiqing, Zhejiang, China). All cells were fostered at 37°C in an atmosphere containing 5% CO2.
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10

Culturing Human Cancer Cell Lines

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Human NSCLC cell lines A549 (RRID: CVCL_0023) and H1299 cells (RRID: CVCL_0060), and human liver adenocarcinoma SK-Hep-1 cells (RRID: CVCL_0525) were purchased from American Type Culture Collection (ATCC). These cells were cultured in standard Dulbecco’s Modified Eagle Medium (DMEM with 25mM glucose) supplemented with 10% fetal bovine serum, 1% penicillin, and 50ug/ml streptomycin. All cells were grown in a humidified cell incubator with 5% CO2 at 37°C.
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