The largest database of trusted experimental protocols
Sourced in United States, Australia

Pepsin is a protease enzyme derived from porcine gastric mucosa. It is commonly used in laboratory settings for the digestion of proteins during various biochemical and analytical procedures.

Automatically generated - may contain errors

34 protocols using pepsin

1

Collagen Extraction from PGLA Skin

Check if the same lab product or an alternative is used in the 5 most similar protocols
Extraction of collagen from PGLA skin was carried out at 4 °C as described in [15 (link)]: 200 g of skin were mixed with 3 L of 0.1 N NaOH, stirring for 24 h, changing the alkaline solution three times, then the alkaline solution was removed, and the skins were washed with cold distilled water until neutral pH. Collagen extraction was carried out with 0.5 M acetic acid containing 0.1% (w/v) pepsin (0.5 U/mg; Acros Organics, Janssen Pharmaceutical, Geel, Belgium) for 24 h (1:40 skin weight/acid volume). The suspension was then centrifuged at 6000× g for 20 min at 4 °C, the residue discarded, and the supernatant salted-out with NaCl at a final concentration of 2.0 M. The precipitated collagen was dissolved in 0.5 M acetic acid, and dialyzed for 3 days against cold distilled water, using 12,000 Da cut-off dialysis membranes and continuous stirring. Dialyzed PSC was freeze-dried and was kept at −20 °C until it was used for hydrolysis.
+ Open protocol
+ Expand
2

Bioactive Compounds Evaluation in Berries

Check if the same lab product or an alternative is used in the 5 most similar protocols
Blueberry powder and blackcurrant powder were purchased online (Viberi, Timaru, New Zealand). Oat bran was obtained from the local supermarket (Sun Valley, Christchurch, New Zealand). Pepsin (EC 3.4.23.1) pancreatin (EC 232-468-9), α-amyloglucosidase (EC 3.2.1.3), invertase (EC 3.2.1.26), 2,2′-Azino-bis (3-ethylbenzothiazoline-6-sulfonic acid) diammonium salt (ABTS), 2,4,6-Tris(2-pyridyl)-s-triazine (TPTZ), 2-Diphenyl-1-picrylhydrazyl (DPPH), 3,5-Dinitrosalicylic acid (DNS, 98%, ACROS Organics™, Waltham, MA, USA ), Folin and Ciocalteu’s phenol reagent, 2,7 dichlorodihydrofluorescein-diacetate (DCFH-DA), gallic acid, rutin, and trolox (6-hydroxy-2,5,7,8-tetramethylchroman-2-carboxylic acid) were all purchased from Sigma-Aldrich (St. Louis, MO, USA). Other chemicals in this study were of analytical grade.
+ Open protocol
+ Expand
3

Evaluation of Probiotic Viability in Simulated Gastric Juice

Check if the same lab product or an alternative is used in the 5 most similar protocols
In a sterile saline solution (sodium chloride (NaCl) 0.9 g, purified water 100 mL), 3 g/L Pepsin (Pepsin, for biochemistry, powder, ACROS Organics™, Activity: 0.5 U/mg) was added. The pH of the solution obtained was adjusted by 1.0 mol/L HCl to a value of 3.0 using the pH meter in sterility conditions [9 (link),26 (link),27 (link),28 (link)]. For the preparation of gastric juice, distilled water heated at 38–39 °C was used. The testing of the viability of Lactobacillus strains for an hour in the simulated gastric juice was performed for those from the fresh microcapsules as well as for the strains which were stored for various periods of time at 4 °C. The same method described above was used to determine the cell viability of microcapsules in juices (Section 2.4.1). After the elapsed time, the gastric juice was aspirated and intestinal juice was added over the capsules. To test cell viability in gastric juice, after it was aspirated, the capsules were dissolved in sodium citrate to release the cells. The method described above was followed to verify the number of viable cells. The number of cells encapsulated in gastric juice was determined as CFU/g−1.
+ Open protocol
+ Expand
4

Pectin, Starch, and Enzyme Characterization

Check if the same lab product or an alternative is used in the 5 most similar protocols
Low methoxyl pectin (LMP, degree of esterification 26%) from citrus peel was obtained from Ingredient Flavours Co., Ltd., Thailand. Hi-maize starch was procured from National Starch and Chemical Co., Ltd., Bangkok, Thailand. Bromelain from pineapple was purchased from Sisco Research Laboratories Pvt. Ltd., India. Pancreatin enzyme was purchased from Sigma-Aldrich, United States, and Pepsin from Acros, Denmark. All other chemicals used in the study were of analytical grade.
+ Open protocol
+ Expand
5

Stability of TLHE1 and Analogs in Serum and Gastric Fluid

Check if the same lab product or an alternative is used in the 5 most similar protocols
TLHE1 (20 μM) was incubated in 0.5 mL of human serum at 37°C and samples (50 μL) were assayed at 0, 2, 4, 8 and 24 h time intervals. Samples were processed by adding 200 μL of Solvent B (95% Methanol and 0.1% TFA in Water) followed by centrifuging at 16,000 × g for 5 min and analyzing the supernatant using the previously described validated HPLC method. The stability of 6 and 7 (5 μM) in serum was performed in the presence and absence of AG10 (10 μM) using the same procedure described for the stability of TLHE1 in serum. Stability in simulated gastric fluid (SGF): SGF was prepared according to US pharmacopeia guidelines. Briefly, SGF contains 0.2% (w/v) of sodium chloride, 0.32% (w/v) of pepsin (Acros # 41707) and 0.7% (v/v) of concentrated HCl in water (final pH of 1.2). TLHE1 (20 μM) were added to SGF and incubated at 37°C in a shaking water bath. Gastric stability study samples (50 μL) were assayed at 0, 2, 4, 8 and 24 hour time intervals. Samples were processed by adding 200 μL of Solvent B (95% Methanol and 0.1% TFA in Water) followed by centrifuging at 16,000 × g for 5 min and analyzing the supernatant using the previously described validated HPLC method.
+ Open protocol
+ Expand
6

Stability of TLHE1 and Analogs in Serum and Gastric Fluid

Check if the same lab product or an alternative is used in the 5 most similar protocols
TLHE1 (20 μM) was incubated in 0.5 mL of human serum at 37°C and samples (50 μL) were assayed at 0, 2, 4, 8 and 24 h time intervals. Samples were processed by adding 200 μL of Solvent B (95% Methanol and 0.1% TFA in Water) followed by centrifuging at 16,000 × g for 5 min and analyzing the supernatant using the previously described validated HPLC method. The stability of 6 and 7 (5 μM) in serum was performed in the presence and absence of AG10 (10 μM) using the same procedure described for the stability of TLHE1 in serum. Stability in simulated gastric fluid (SGF): SGF was prepared according to US pharmacopeia guidelines. Briefly, SGF contains 0.2% (w/v) of sodium chloride, 0.32% (w/v) of pepsin (Acros # 41707) and 0.7% (v/v) of concentrated HCl in water (final pH of 1.2). TLHE1 (20 μM) were added to SGF and incubated at 37°C in a shaking water bath. Gastric stability study samples (50 μL) were assayed at 0, 2, 4, 8 and 24 hour time intervals. Samples were processed by adding 200 μL of Solvent B (95% Methanol and 0.1% TFA in Water) followed by centrifuging at 16,000 × g for 5 min and analyzing the supernatant using the previously described validated HPLC method.
+ Open protocol
+ Expand
7

Fabrication of Polymeric Membranes

Check if the same lab product or an alternative is used in the 5 most similar protocols
PVDF pellets were purchased from Sanowart Group Co., Ltd. (Zibo City, China). PEG with a molecular weight (MW) of 20 kDa, and microporous zeolite 96096 of the 13X type (crystalline, <10 µm particle size), comprising silica (SiO2) and alumina (Al2O3) with metallic oxide, were purchased from Sigma Aldrich, Subang Jaya, Malaysia. N,N-dimethylformamide (DMF) was purchased from Fisher Scientific, Shah Alam, Malaysia. Egg albumin (EA) (MW = 44.3 kDa) was purchased from Sigma Aldrich, Malaysia, and bovine serum albumin (BSA) (MW = 66 kDa) and pepsin (MW = 35 kDa) were purchased from Acros Organics, Shah Alam, Malaysia.
+ Open protocol
+ Expand
8

Encapsulation of Probiotic Bifidobacterium Animalis

Check if the same lab product or an alternative is used in the 5 most similar protocols
The probiotic culture of Bifidobacterium animalis subsp. lactis BB-12 was obtained from Chr. Hansen (Hoersholm, Denmark). Sodium alginate, calcium chloride, xanthan gum, κ-carrageenan, pectin, inulin, glucose, and Tween 80 were provided by Sigma-Aldrich Chemie GmbH (Taufkirchen, Germany); glycerol was purchased from Lach-Ner (Brno, Czech Republic); and nanocrystalline cellulose (CNC) from CelluForce (Montreal, Canada). Olive pomace oil was kindly provided by MINERVA S.A. (Athens, Greece) and sweet whey with the following specifications: humidity 1%, fat content 1%, protein content 10.2%, lactose (hydrated) 75%, ash content 7.3%, was kindly provided by ION S.A. (Piraeus, Greece). Whole-fat milk was obtained from the local market. The materials for the microbiological analyses, such as MRS agar, Ringer’s solution, citric acid, and disodium phosphate, were acquired from Merck (Taufkirchen, Germany), whereas l-cysteine-HCl, neomycine sulfate, nalidixic acid, lithium chloride, and paromomycine sulfate by Thermo Fischer Scientific (MA, USA). Pepsin, pancreatin, and bile extract were obtained from Acros Organics (New Jersey, USA).
+ Open protocol
+ Expand
9

Quantification of Arsenic Species

Check if the same lab product or an alternative is used in the 5 most similar protocols
All reagents used were of analytical
grade or better. Argon (Ar) purged double deionized water (DDIW) (18
MΩ, Barnstead Nanopure Diamond) was used throughout the experiments.
Acetonitrile and pepsin were purchased from Thermo Fisher Scientific,
USA. l-Glutathione reduced (98–100%, GSH) was purchased
from Sigma-Aldrich, USA. Sodium chloride (NaCl), sodium phosphate,
dibasic (Na2HPO4·7H2O), potassium
chloride (KCl), potassium dihydrogen phosphate (KH2PO4),
used to prepare phosphate buffered saline (PBS) and phosphate buffer,
ammonium hydroxide (NH4OH), potassium hydroxide (KOH),
and nitric acid (HNO3), used for pH adjustments, were also
purchased from Thermo Fisher Scientific, USA. Formic acid and acetic
acid used to prepare formate and acetate buffers were purchased from
Acros Organics and Thermo Fisher Scientific, USA, respectively. DMAIII was synthesized in our laboratory following procedures
previously reported.30 (link) DMAIII(GS) was obtained from Ziopharm Oncology, Boston, MA.
+ Open protocol
+ Expand
10

Evaluating Salmonella Typhimurium Inactivation in a Simulated Gastrointestinal Environment

Check if the same lab product or an alternative is used in the 5 most similar protocols
To perform the 11 experiments designed by the CCRD, S. Typhimurium cells recovered from BDL samples—MS cells (Section 2.2 and Section 2.3.1)—at each incubation condition of the CCRD runs were estimated by enumerating surviving cells (Table 1). S. Typhimurium inactivation was calculated as decimal logarithm reductions between the initial inoculum and the recovered cells—Log N0/N.
The same 11 experimental conditions were used to assess the effect of each exposure condition in the BDL matrix on subsequent SGF S. Typhimurium survival (Table 1). After each experiment, 10 g of the BDL samples were homogenized using the stomacher with 90 mL of SGF and incubated at 37 ± 1 °C for 1 h. The SGF comprised 8.3 g proteose peptone (Sigma-Aldrich, Darmstadt, Germany); 2.05 g sodium chloride; 0.6 g potassium phosphate (Sigma-Aldrich, Darmstadt, Germany) 3.5 g D-glucose (Vetec Química Fina Ltd.a, RJ, Brazil), 0.11 g calcium chloride (Vetec Química Fina Ltd.a), 0.37 g potassium chloride (Tedia Company Inc, RJ, Brazil), 0.1 g lysozyme, and 13.3 mg pepsin (Thermo Fisher Scientific, MA, USA) per liter of distilled water [23 (link),24 (link),25 (link)]. S. Typhimurium enumerations were performed by plating an aliquot of the BDL-SGF cell suspension prior and after the 1 h incubation at 37 °C. S. Typhimurium inactivation was calculated by the logarithm difference from initial and final counts Log N0/N.
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!