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38 protocols using cell tak cell and tissue adhesive

1

Organ of Corti Explant Culture

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The P1 mice were euthanized and decapitated, and their heads were placed in 75% ethanol and quickly transferred to pre‐cooled HBSS. The temporal bones were dissected out, the cochlea was isolated from the temporal bones using sterile procedures in ice‐cold HBSS, and the basilar membranes were removed with tweezers. Explants of the organ of Corti were placed intact on polyphenol‐protein‐coated cover glasses (Cell‐Tak Cell and Tissue Adhesive, Corning, USA) and maintained in four‐well culture dishes (Corning, USA) in culture medium composed of DMEM/F‐12 supplemented with N2, B27, and Ampicillin. The explant tissues were incubated at 37°C in an atmosphere at 5% CO2. After 12 h of incubation, AAV was added to each well and incubated for 48 h, and then the culture medium was replaced with fresh culture medium.
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2

Calcium Imaging of Adherent Cells

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Cells were plated on 35-mm polystyrene culture dishes to a density of 106 cells per dish. In one experiment, the substrate was coated with Cell-Tak Cell and Tissue Adhesive (Corning) to facilitate immediate cell adhesion. In another experiment, the culture dish substrate was replaced with an acoustically transparent, 50-μm-thick Mylar film (#48-2F-36; CS Hyde Company) to minimize reflection at the surface and eliminate ultrasonic surface waves. All cells were stained with cell-membrane permeant Fluo-4 AM (Thermo Fisher Scientific), a fluorescent reporter of intracellular calcium activity. Staining was performed by incubating dishes with 1 µM Fluo-4 AM for 30–60 min immediately prior to imaging. Following calcium dye loading, cells were washed with and maintained in external buffer solution consisting of 140 mM NaCl, 2.8 mM KCl, 1 mM MgCl2, 2 mM CaCl2, 10 mM HEPES, and 10 mM d-glucose, adjusted to pH 7.3 and 300 mOsm.
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3

Attachment and Imaging of Bacterial Cells

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To obtain fluorescence and atomic force microscopy (AFM) images of cells grown in liquid culture, the cells must first be attached to a surface. This was accomplished using Corning Cell-Tak cell and tissue adhesive, deposited onto a clean glass coverslip. Cell-Tak was diluted 1:5 with 5% acetic acid. Glass coverslips were plasma-cleaned for 3 min using a Harrick Plasma FDC-32G plasma cleaner set to low. The clean coverslips were placed in a Petri dish, and 15 μL of diluted Cell-Tak was pipetted in the center of each coverslip. Coverslips were left to dry overnight at room temperature before washing with copious amounts of PB. Bacteria (1 × 107) were pipetted onto the dried circle of Cell-Tak and incubated for approximately 2 h at room temperature. The coverslips were then gently rinsed with PB and were then used in either live/dead fluorescent staining or AFM experiments.
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4

Measuring Glutaminolysis via Extracellular Flux

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Extracellular acidification rate (ECAR) and oxygen consumption rate (OCR) were measured using a XFp extracellular flux analyzer. To measure glutaminolysis, assay buffer was made of XF base medium (without glutamine) with 10mM Glucose and 1.0mM sodium pyruvate. Cell-Tak Cell and Tissue Adhesive (Corning) was used for coating plates and 0.15×106 T cells per wells were seeded. To analyze glutaminolysis in cells on glutamine (Gln), we calculated and compared the amount of ΔΔOCR as follows (Supplementary Figure 1): We first determined the ΔOCR (with Gln) and ΔOCR (without Gln) which represent the change in the amount of OCR caused by supplementation of media in the presence or absence of Gln respectively (5 (link)). Glutaminolysis was defined as the calculated ΔΔOCR (ΔOCR with Gln minus ΔOCR without Gln). All other procedures, including glycolysis stress test were performed according to the manufacturer’s instructions (Agilent).
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5

Bioenergetic Profile Characterization

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Seahorse XF96 Analyzer (Seahorse Bioscience, Billerica, MA, USA) was used to analyze the oxygen consumption rate (OCR) and extracellular acidification rate (ECAR). 96-well Seahorse tissue culturing plates were pre-incubated with Cell-Tak Cell and Tissue Adhesive (354240; Corning, Corning, NY, USA). Cells were seeded in unbuffered DMEM media at a density of 80 K per well. Cells were incubated for 1 hour without CO2 at 37 °C. OCR and ECAR rates were measured as previous described by us79 (link),80 (link). The basal OCR and ECAR rates were measured 3 times without adding any inhibitors.
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6

Seahorse XFp Cell Bioenergetics Assay

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Seahorse XFp cell culture miniplates (Agilent, #103025-100) were treated with Cell-Tak cell and tissue adhesive (0.024 mg/mL Corning, #354240) according to manufacturer specifications and 30,000 cells/well were plated. Agilent Seahorse XF base medium (#103193-100) was supplemented with 25 mM glucose, 2 mM sodium pyruvate, and 2 mM l-glutamine. Basal respiration was normalized by cell count.
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7

Measuring Kidney Tubule Bioenergetics

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A Seahorse Bioscience XFe24 cell culture microplate (Seahorse Bioscience, North Billerica, USA) was coated with Cell-Tak cell and tissue adhesive (Corning, USA) before 50 µl of 22.4 µg ml−1 Cell-Tak solution was added into the well. After 20 min of room temperature incubation, the microplate was washed twice with sterile water. Freshly isolated kidney tubules were resuspended in 37 °C preheated Seahorse XF Assay Medium (Seahorse Bioscience) and seeded onto the coated Seahorse Bioscience XFe24 cell culture microplate at a density of 500 tubules/50 µL/well. A control well had 50 µl Seahorse XF Assay Medium only. Before incubating at 37 °C without CO2 for 25–30 min, the microplate was centrifuged at 200×g for 1 min. A 130-µl preheated analysis buffer was added to the well after ensuring that all tubules sank to the plate’s bottom; the incubation was continued at 37 °C without CO2 for 15–20 min. The microplate was then put into a Seahorse XFe24 energy analyzer. An XF Cell Mito Stress Test kit was used to test for mitochondrial stress, an XF Glycolysis Stress Test kit was used to test for glycolysis stress and an XF Palmitate-BSA FAO Substrate was used to test the metabolism of fatty acid oxidation.
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8

Seahorse XF Metabolic Flux Analysis

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In experiments performed on a Seahorse XF24 Flux analyzer, cells were maintained at 5% CO2 in DMEM media at 37°C. Cells (40,000) were plated on XF24 plates using Cell-Tak™ Cell and Tissue Adhesive (Corning) and growth medium was replaced with bicarbonate-free modified DMEM, the ‘assay medium’. In experiments performed on a Seahorse XF96e Flux analyzer, cells (20,000) were placed into each well using Cell-Tak™. After incubation for another 60 min in a 37°C incubator without CO2, oxygen consumption rate (OCR) and extracellular acidification rate (ECAR) were measured essentially as previously described (18 (link)).
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9

Metabolic Profiling of HL-60 Cells

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Glucose, lactate and glutamate concentrations were measured using enzymatic assays (CMA Microdialysis AB) and a CMA 600 analyzer (Aurora Borealis). Total glutathione was measured using a dedicated quantification kit (Enzo). Oxygen consumption rate (OCR) and extracellular acidification rate (ECAR) were performed using the Seahorse XF96 plate reader. Briefly, after 24–48 hours of pre-incubation in the indicated medium, 1.5 × 105 HL-60 cells were seeded in 96-well plates coated with Cell-Tak™ Cell and Tissue Adhesive (Corning). After equilibration in unbuffered DMEM with either Gln or Glc (or both) at 37°C in a CO2-free incubator, OCR and ECAR were measured.
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10

Glycolysis Stress Testing of cMoPs

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A Seahorse XFe96 culture plate (Agilent Technologies) was coated with 22.4 µg/ml Cell-Tak™ Cell and Tissue Adhesive (Corning®) for one hour at room temperature after which the Cell-Tak was removed and the wells were washed once with 200 µl water. The plate was allowed to air dry. (Cell-Tak was diluted in water, 25 µl of dilution per well, Stock: 1.39 mg/ml). Sorted cMoP were seeded in duplicate with M-CSF (50 ng/ml) and fixed BCG (106/ml) or with M-CSF (50 ng/ml) alone as control. After incubation for 6 days, cells were analyzed by glycolysis stress test on a Seahorse XFe96 Analyzer (Agilent Technologies). Accordingly, Seahorse base media supplemented with 2 mM L-Glutamine, adjusted to pH 7.4 was used as assay medium. Injection plates were prepared with 10 mM Glucose (Port A), 1 µM Oligomycin (Port B) and 50 mM 2-DG (Port C). 2-DG, L-Glutamine Solution and Oligomycin were purchased from Sigma Aldrich. The assay protocols were designed using Wave desktop software (Version: 2.4.0.60 Agilent).
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