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19 protocols using mia paca 2

1

Cholangiocarcinoma and Pancreatic Cancer Cell Lines

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The cholangiocarcinoma cell lines HuCCT-1 and HuH28 were purchased from the Japanese Collection of Research Bioresources (Osaka, Japan); and the RBE, SSP25 and YSCCC cell lines from the RIKEN Bioresource Center (Ibaraki, Japan). RBE, HuCCT-1, HuH28, SSP25 and YSCCC cell lines were cultured in RPMI-1640 (Invitrogen, Tokyo, Japan) containing 10% FBS, and the OZ cell line was cultured in Williams' E medium (Invitrogen) containing 10% FBS. The pancreatic cancer cell lines, such as Panc1, PK-8, PK-59, KLM-1 and MiaPaCa-2, were purchased from the RIKEN Bioresource Center (Ibaraki, Japan), and the Hs700T cell line from the American Type culture collection (Manassas, VA, USA). Panc1, PK-8, PK-59 and KLM-1 cell lines were cultured in RPMI-1640 containing 10% FBS, and the MiaPaCa-2 and Hs700T cells were cultured in D-MEM (Invitrogen) containing 10% FBS. All cultures were maintained in a 5% CO2 air-humidified atmosphere at 37°C.
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2

Culturing Mammary Epithelial Cell Lines

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MCF10A cells were purchased from ATCC, and Human Mammary Epithelial Cells (HMEC) were purchased from Thermo Fisher Scientific (A10565). These cells were cultured in mammary epithelium basal medium (MEBM, #CC‐4136, Lonza) supplemented with bovine pituitary extract (#CC‐4009G, Lonza), 20 ng/mL hEGF (#CC‐4017G, Lonza), 10 μg/mL insulin (#CC‐4021G, Lonza), 0.5 mg/mL hydrocortisone (#CC‐4031G, Lonza), and 100 ng/mL cholera toxin solution (#030–20621, Wako). HEK293T (#RCB2002) and MIA‐PACA‐2 (#RCB2094) were purchased from RIKEN BRC. p53‐deficient mouse ovary surface epithelium (MOSE) cells (#JCRB0151.1) were purchased from JCRB cell bank and cultured in Dulbecco's modified Eagle's medium (#04129775, Wako) supplemented with 10% fetal bovine serum (FBS, #10270‐106, Thermo Fisher Scientific) and 1% penicillin–streptomycin solution (#16823291, Wako). All cells were maintained in a humidified CO2 incubator at 37°C. Mycoplasma infection was regularly checked by PCR using the following sequences of the primers: forward: ACACCATGGGAGCTGGTAAT, reverse: CTTCWATCGACTTYCAGACCCAAGGC.
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3

Culturing Pancreatic and Gastric Cancer Cell Lines

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The human pancreatic cancer cell line Capan-1 was purchased from the American Type Culture Collection (ATCC, Manassas, VA, USA). MIA PaCa-2, PANC-1, and BxPC-3 cells were purchased from the Bioresource Collection and Research Center (BCRC, Hsinchu, Taiwan). AGS, a human gastric cancer cell line, was purchased from BCRC. All cells were maintained in DMEM/F-12 medium supplemented with penicillin (100 U/mL) and streptomycin (100 μg/mL) (Thermo Scientific, Logan, UT, USA). Capan-1 cells were supplemented with 15% fetal bovine serum (FBS) (Gibco, Grand Island, NY, USA). MIA PaCa-2 cells were supplemented with 10% FBS and 2.5% horse serum (Gibco, Grand Island, NY, USA). PANC-1, BxPC-3, and AGS cells were supplemented with 10% FBS. All cells were incubated at 37 °C in a humidified atmosphere with 5% CO2.
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4

Cell Line Procurement for Diverse Cancer Research

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The human PDAC cell lines PANC-1 (RCB2095) and MIA PaCa-2 (RCB2094), human bile duct cell line HuCCT1 (RCB1960), human hepatocellular carcinoma cell line HuH-7 (RCB1942), human liver cancer cell line Hep G2 (RCB1886), and human gastric cancer cell line KATO III (RCB2088) were purchased from RIKEN BRC. The colon cancer cell line SW480 (ATCC CCL-228) was purchased from ATCC.
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5

Establishing GEM-Resistant Pancreatic Cancer Cell Line

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The human pancreatic carcinoma cell line MIA PaCa-2 was obtained from the Bioresource Collection and Research Center (BCRC; Hsinchu, Taiwan). The cells were cultured in high glucose DMEM supplemented with 10% v/v fetal bovine serum, 2.5% v/v horse serum, 1.5 g/L sodium bicarbonate, and 1% penicillin-streptomycin. A GEM-resistant cell line (MIA PaCa-2 GEMR cells) was established by incrementally increasing GEM concentrations (from 0.05 μM to 0.5 μM) in culture medium for developing a cellular model that tolerated 0.5 μM GEM [22 (link)]. Cells were maintained at 37°C in a humidified incubator with 5% v/v CO2 and 95% v/v air.
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6

Culturing Human Pancreatic Cancer Cell Lines

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We purchased human PDAC cell lines (PK-1, PK-8, KLM-1, Panc-1 and MIAPaca2) from RIKEN BioResource Research Center (RIKEN BRC, Ibaraki, Japan) and another human PDAC cell line (BxPC-3) from American Type Culture Collection (ATCC, Manassas, VA, USA). We maintained PK-1, PK-8, KLM-1, Panc-1 and BxPC-3 cells in RPMI-1640 (Nacalai Tesque, Kyoto, Japan) supplemented with 10% fetal bovine serum (FBS) (Merck KGaA, Darmstadt, Germany, or Life Technologies, Carlsbad, CA, USA), 100 U/ml penicillin (Life Technologies) and 100 µg/ml streptomycin (Life Technologies). We maintained MIAPaca2 cells in DMEM (Nacalai Tesque) supplemented with 10% FBS, 50 U/ml penicillin and 50 µg/ml streptomycin. We maintained all cell lines at 37 °C in a humidified atmosphere containing 5% CO2.
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7

Generation of Gemcitabine-Resistant Pancreatic Cancer Cells

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Human pancreatic cancer MIA PaCa-2 from the Bioresource Collection and Research Center (BCRC Number: 60139) in Taiwan was purchased. By sub-culturing MIA-PaCa-2 cells and gradually increasing gemcitabine doses from 50 to 500 nM for six months, gemcitabine-resistant MIA-PaCa-2 pancreatic cancer cells (MIA-GR100) were generated [26 (link),27 (link)]. MIR-GR100 and MIA PaCa-2 were cultured in MEM supplemented with 10% FBS, penicillin (100 U/mL), and streptomycin (100 μg/mL) at 37 °C with 5% CO2. For inhibitor assays, MIA-GR100 cells were pre-treated with chloroquine (CQ, 100 mM), 3-Methyladenine (3-MA, 10 mM), and z-Val-Ala-Asp-fluoromethyl ketone (zVAD-FMK, 10 mM) at 37C for 1 h, and then HMJ-38 cells were treated for the indicated durations.
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8

Establishing GEM-Resistant Pancreatic Cancer Cell Model

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The human pancreatic cancer cell lines MIA Paca-2 (BCRC NO. 60139), BxPC-3 (BCRC NO. 60283), AsPC-1 (BCRC NO. 60494), HPAC (BCRC NO. 60495) and PANC-1 (BCRC NO. 60284) were purchased from the Bioresource Collection and Research Center (Hsin Chu, Taiwan). A stable GEM-resistant pancreas carcinoma cell line (designated MIA Paca-2 GEMR cells) was established from 0.05 μM GEM concentration and gradually increasing GEM concentrations for developing a cellular model tolerance of 0.5 μM GEM. All tumor cells were maintained according to ATCC guidelines and cultured in an incubator supplemented with 5% CO2 at 37 °C. The stimulants GEM and quercetin were purchased from Sigma–Aldrich (St. Louis, MO, USA).
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9

Cell Culture Protocol for Human Cancer Cell Lines

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HEK293T (human embryonic kidney), A549 (human lung cancer), MIAPaca-2 (human pancreatic cancer), and Panc-1 (human pancreatic cancer) cell lines were provided by RIKEN BRC through the National Bio-Resource Project of the MEXT, Japan. H358 (human lung cancer), H460 (human lung cancer), and MDA-MB435S (human melanoma) cell lines were obtained from ATCC. Panc-1, H358, and H460 cell lines were cultured in RPMI-1640 (WAKO, Osaka, Japan, #189-02025) supplemented with 1 mM sodium pyruvate (WAKO, #190-14881), 2.5 g/L D (+)-glucose (WAKO, #079-05511), 10 mM HEPES, 10% FBS, and penicillin-streptomycin sulfate (WAKO, #168-23191). Other cell lines were cultured in DMEM (WAKO, #043-30085) supplemented with 10% FBS, and in penicillin-streptomycin sulfate (WAKO, #168-23191). These cell lines were maintained in low passage cultures.
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10

Establishment of GEM-resistant MiaPaCa-2 Cell Line

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The Homo sapiens pancreatic cancer cell line MiaPaCa-2 was purchased from the Bioresource Collection and Research Center (Hsinchu, Taiwan). The GEM-resistant MiaPaCa-2GEMR cell line was established by gradually increasing GEM concentrations to 0.5 µM GEM to induce tolerance as described in a previous report (21 (link)). Cells were cultured in DMEM (high glucose) medium supplemented with 10% fetal bovine serum (FBS) plus 2.5% horse serum and 1% PS antibiotic solution (100 U/ml penicillin and 100 µg/ml streptomycin). The two cell lines were maintained in a 37°C incubator with 5% CO2.
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