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4 protocols using rabbit anti active caspase 3

1

Immunohistochemical Analysis of Cellular Markers

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For immunohistochemistry, the sections were incubated at 4°C overnight with 1∶100 dilutions of primary antibodies, including rabbit anti-active caspase 3 (BD Biosciences, San Jose, CA, USA), mouse anti-PCNA (Santa Cruz Biotechnology, Inc., Santa Cruz, CA, USA), rabbit anti-endothelin 1 (GeneTex Inc., Hsinchu, Taiwan), rabbit anti-phospho-AKT (Ser473) (Cell Signaling Technology, Danvers, MA, USA), and anti-AKT (Cell Signaling Technology, Danvers, MA, USA). After washing with PBS, the sections were incubated with a 1∶100 dilution of the secondary antibody, either goat anti-rabbit IgG (Santa Cruz Biotechnology, Inc., Santa Cruz, CA, USA) or goat anti-mouse IgG (Santa Cruz Biotechnology, Inc. Santa Cruz, CA, USA), at room temperature. The protocol of immunohistochemistry was described previously [32] (link).
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2

Immunofluorescence Staining for Apoptosis and Focal Adhesion

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Cells were fixed with 4% formaldehyde in PBS at 37°C for 20 min, permeabilized for 10 min with 0.5% Triton in PBS, blocked with AbDil (PBS with 0.1% Triton X-100 and 2% BSA) for 10 min, and incubated with primary antibody for 1 hr. Antibody concentrations used for immunostaining were: 1:200 rabbit anti-active caspase-3 (BD), 1:100 rabbit anti-phospho FAK (Tyr 397) (Cell Signaling, Danvers, Massachusetts), and 50 μg/ml anti-S1P mAb (LPath Inc., San Diego, CA). Alexa Fluor 488 goat anti–rabbit IgG and Alexa Fluor 488 goat anti–mouse IgG were used as secondary antibodies to detect active caspase-3 and S1P, respectively. Actin was detected with Alexa Fluor 568–phalloidin (Invitrogen). DNA was detected with 1 μg/ml Hoechst 33,342 (Sigma–Aldrich).
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3

Immunofluorescence Staining of Cultured Cells

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Cultured cells were fixed with 4% paraformaldehyde (PFA) in 0.01M PBS at room temperature or methanol/acetone (1:1) at −30°C for 15 min, and then rinsed in PBS. For F-actin staining, transfected cells were fixed with 4% PFA, followed by permeabilization with 0.5% TritonX-100 in PBS for 10 min. After blocking with 10% normal goat serum and 0.1% TritonX-100 in PBS, cells were reacted with primary antibodies overnight at 4°C. After washing, cells were labeled with species-specific secondary antibodies conjugated to Alexa Fluor 488 or 594 (1:1000, Life Technologies) and counterstained with Hoechst 33342 (Sigma) or DRAQ5 (Abcam). Primary antibodies used were: rat anti-GFP (1:2000, Nacalai Tesque), rabbit anti-Dpy19L1 (C-ter, 1:100, Abgent; N-ter, 1:250, Abcam), chicken anti-Calreticulin (1:1000, Abcam), mouse anti-Calreticulin (1:200, Abcam), rabbit anti-active Caspase-3 (1:1000, BD Biosciences), Phalloidin (CF dye conjugates, 1:200, Biotium) and mouse anti-α-Tubulin (1:2000, Sigma). Pictures were taken with a digital camera (DP72, Olympus). Confocal images were captured with a confocal laser scanning microscope (FV1200). Intensity profile analysis was performed using FV10-ASW software (Olympus). For colocalization analysis, the scatter plots of red and green pixel intensities of confocal images were created using Image J/Fiji software.
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4

Immunofluorescence Assay for Active Caspase-3 and F-actin

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Human umbilical vein endothelial cell cultured in 8-well chamber glass slides coated with BME (Trevigen Inc., USA), as described previously (13 (link)), were treated for 5 min with mixture containing 0.1% Triton X-100 and 4% PFA containing 5% sucrose, and fixed for an additional 25 min with 4% PFA containing 5% sucrose. The cells were washed for 10 min with PBS and an additional 15 min with PBS containing 0.05% Tween 20 (PBS-T). Next, fixed cells were blocked with IF buffer (130 mM NaCl, 7 mM Na2HPO4, 3.5 mM NaH2PO4, 7.7 mM NaN3, 0.1% BSA, 0.2% Triton X-100, and 0.05% Tween 20) containing 10% donkey serum for 1 h followed by overnight incubation at 4°C with rabbit anti-active-caspase-3 (1:400) (Cat # 559565; BD Biosciences). The cells were washed three times with PBS for 15 min each and incubated for 1 h with donkey anti-rabbit conjugated to Alexa Fluor® 647 (Invitrogen, USA) at room temperature. Next, the cells were washed as mentioned earlier and mounted with VECTASHIELD mounting medium with 4′,6-diamidino-2-phenylindole (DAPI). Immunofluorescent images were captured by Zeiss LSM 700 confocal laser scanning microscope (magnification 40×).
For F-actin staining, cells were incubated overnight with Alexa Fluor 488 Phalloidin (1:40) (Molecular Probes, USA), washed three times with PBS for 15 min each and mounted with VECTASHIELD mounting medium with DAPI.
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