The largest database of trusted experimental protocols

13 protocols using ab176328

1

Western Blot Analysis of PPARγ and PGC1α

Check if the same lab product or an alternative is used in the 5 most similar protocols
The cells and mouse heart tissue were homogenized in lysis buffer to extract whole-cell lysates, and the protein concentrations of the samples were determined by BCA kit. The cleavage products were examined by Western blotting assay as described previously (He et al., 2015a (link)). The protein concentration of each sample was adjusted to the same level, and 10 μL of each sample was loaded into a gel for electrophoresis. The protein samples were then separated by SDS-PAGE, and the proteins in the gel were transferred electrically to a polyvinylidene fluoride (PVDF) membrane. Non-specific binding was blocked by incubating the membranes in 5% BSA. Afterwards, the PVDF membranes and antibodies were incubated at 4°C overnight, and the corresponding horseradish peroxidase secondary antibody (ZSGB-BIO, goat anti-rabbit ZB-2301) was added for 1 h. The membranes were washed, and the images were recorded and analyzed with a Bio-Rad Bole ChemiDoc MP Chemiluminescent Gel Imaging System. Antibodies against the following proteins were used: PPARγ (Abcam, ab272718, London, United Kingdom, 1:1000), PGC1α (Abcam, ab176328, London, United Kingdom, 1:1000), and β-actin (NCM Biotech, AB1020, Suzhou, Jiangsu, China, 1:1000).
+ Open protocol
+ Expand
2

Immunofluorescence Analysis of PGC-1β and FOXA2

Check if the same lab product or an alternative is used in the 5 most similar protocols
Cells were grown in 24-well chamber slides (NEST, USA) for 48 h, and washed with cold PBS and fixed in 4% paraformaldehyde for 15 min. Subsequently, the coverslips were permeabilized with 0.3% Triton X-100 for 6 min and blocked with 5% normal goat serum for 30 min at room temperature. Then, the cells were incubated with anti-PGC-1β (ab176328, Abcam) and anti-FOXA2 (ab117542, Abcam) overnight at 4 °C, and followed by incubation with fluorescent secondary antibody for 1 h at room temperature. The nucleus was visualized with DAPI solution (dilution: 1:1000, Sigma, USA) for 6 min in the dark. Confocal laser scanning microscope was utilized for image analysis.
+ Open protocol
+ Expand
3

Tissue Protein Extraction and Immunoblotting

Check if the same lab product or an alternative is used in the 5 most similar protocols
After the mice were sacrificed, tissues were immediately collected, snap-frozen in liquid nitrogen, and stored at –80°C for downstream analyses. Muscles were lysed in 200–350 μL ice-cold 1% Triton X100 in PBS containing proteinase inhibitors (Roche Diagnostic), homogenized using TissueLyser (QIAGEN), and 25 μg of protein lysate was processed as described previously (13 (link)). Primary antibodies — mouse monoclonal anti-FGF1 (AF4686, R&D Systems), mouse monoclonal anti-GAPDH (sc-59540, Santa Cruz Biotechnology Inc.), rabbit polyclonal anti–HO-1 (ADI-SPA-894, Enzo Life Sciences), rabbit polyclonal anti-AMPKA (2603S, Cell Signalling Technology), and rabbit monoclonal anti–PGC1-β (ab176328, Abcam) — and secondary antibodies (conjugated with HRP) include anti–mouse Ig (554002, BD Biosciences) for the detection of GAPDH or FGF1, as well as anti–rabbit IgG (7074, Cell Signaling Technology) for the detection of HO-1, AMPKA, PGC1-β, were used.
+ Open protocol
+ Expand
4

Myeloma Cell Line Culture and Hypoxia Induction

Check if the same lab product or an alternative is used in the 5 most similar protocols
Multiple myeloma cell lines, including MM.1R (lightly attached cell lines), U266B1, and RPMI8226, were purchased from ATCC and cultured in RPMI‐1640 medium supplemented with 100 U·mL−1 penicillin, 100 μg·mL−1 streptomycin, and 10% FBS (fetal bovine serum). All cells were maintained in a humidified incubator with 5% CO2 at 37 °C. Hypoxic conditions were induced by incubating in 94% N2, 5% CO2, and 1% O2 for 24 h. The antibodies for PGC1β (ab176328) were obtained from Abcam (Shanghai, China), and β‐actin (sc‐47778), Ki‐67 (sc‐101861), LDHA (sc‐137243), RXRα (sc‐515928), and RXRβ (sc‐742) were obtained from Santa Cruz Biotechnology (Shanghai, China). siRNA against PGC1β, RXRα, and RXRβ or nonspecific siRNA (from Ambion, Beijing, China) was transfected using Oligofectamine reagent (Invitrogen, Beijing, China) according to the manufacturers’ instructions. Protein concentration was measured by the Coomassie Protein Assay kit (Pierce, Holmdel, NJ, USA) using bovine serum albumin as a standard. The vitamin E derivative Trolox (#238813) was obtained from Sigma (Shanghai, China).
+ Open protocol
+ Expand
5

Epithelial Cell Culture and Protein Analysis

Check if the same lab product or an alternative is used in the 5 most similar protocols
Human primary mammalian epithelial cells (HMECs, obtained from Lonza) were cultured in MEGM BulletKit (CC-3150). MCF7 and MDA-MB-231 (MDA231, obtained from ATCC) were cultured in DMEM at 37°C supplemented with 10% FBS and antibiotics. Antibodies for β-actin (sc-47778), Ki-67 (sc-101861), SREBP1 (sc-13551), SREBP2 (sc-13552), and VDAC1 (sc-390996) were obtained from Santa Cruz Biotechnology. Antibodies for HKDC1 (ab228729) and PGC1β (ab176328) were obtained from Abcam. 3-nitrotyrosine (3-NT) was measured using the 3-Nitrotyrosine ELISA Kit (ab116691 from Abcam). The Coomassie Protein Assay Kit (Pierce Biotechnology) was used to measure the protein concentration. The siRNA for SREBP1, SREBP2, PGC1β, and negative control (#AM4636) were purchased from Ambion. The Lipofectamine™ Reagent (Invitrogen) was used for DNA transfection (5 (link)).
+ Open protocol
+ Expand
6

Western Blot Analysis of Cardiac Proteins

Check if the same lab product or an alternative is used in the 5 most similar protocols
The left ventricular protein was extracted with RIPA lysate containing protease inhibitors, and the protein concentration was determined by BCA method. The SDS-PAGE was performed, electrophoresed to nitrocellulost membrane, and blocked with 5% bovine serum albumin for 1 h. Next, antibodies and dilutions as follows: Bax (Abcam, ab32503, rabbit), Bcl-2 (Abcam, ab182858, rabbit), PGC-1α (Abcam, ab176328, rabbit), PPAR-α (Abcam, ab245119, rabbit), RXR-α (Abcam, ab125001, rabbit), NRF-1 (Abcam, ab55744, rabbit) and Tfam (Abcam, ab176558, rabbit).The fluorescently labeled secondary antibodies are then conjugated by incubation. The blotted proteins were examined and quantified on the Odyssey Infrared Imaging system. The ratio of the target protein to the internal reference protein β-actin reflects the relative expression of the protein.
+ Open protocol
+ Expand
7

Hepatic Protein Quantification Protocol

Check if the same lab product or an alternative is used in the 5 most similar protocols
Total liver protein lysates were separates on 10% and 12% SDS–polyacrylamide gel and transferred on nitrocellulose membrane. Membranes were blocked with 5% BSA in TBS–0.01% Tween 20 and probed with specific antibodies against PGC-1β (ab176328) and GCL-c (ab53179) purchased from Abcam. Nuclear encoded β-actin (Abcam) were used as loading control. Membranes were finally incubated with HRP conjugated secondary antibodies and developed with a chemiluminescent reagent (Biorad, California, USA).
+ Open protocol
+ Expand
8

T cell Activation Protein Analysis

Check if the same lab product or an alternative is used in the 5 most similar protocols
Naive or CD8 T cells at defined time points post activation or restimulation were lysed in lysis buffer (20 mM Tris, pH 7.4, 2 mM EGTA, 1% NP-40, protease inhibitors). Equivalent amounts of proteins (20 g) were subjected to sodium dodecyl sulfate–polyacrylamide gel electrophoresis (SDS–PAGE) and transferred to nitrocellulose membranes. Membranes were then probed with the indicated primary antibodies targeting β-actin (AC026, ABclonal), PGC-1α (AB3242, Merck Millipore), or PGC-1β (ab176328, ABCAM), followed by the appropriate horseradish peroxidase-conjugated secondary antibodies (KPL).
+ Open protocol
+ Expand
9

Cardiac Protein Expression Analysis

Check if the same lab product or an alternative is used in the 5 most similar protocols
Fifty micrograms of protein from hearts or cardiomyocytes was ran and separated by 10% SDS gel and electrotransferred to PVDF membranes. Each membrane was preblocked in 10% non-fat milk dissolved in solution (Tris-buffered saline, pH 7.6, containing 0.05% tween 20) and incubated with specific primary antibodies, including ANP (PA5-29559, thermo), BNP (PA5-29559, thermo), TGF-β1 (ab215715, Abcam), SMAD3 (ab40854, Abcam), α-porin (ab14734, Abcam), PGC-1α (ab176328, Abcam), p-AKT (4060, Cell Signaling Tech), AKT (4691, Cell Signaling Tech), p-GSK3β (9323, Cell Signaling Tech), GSK3β (9315, Cell Signaling Tech), and Tubulin (2128, Cell Signaling Tech). Immunoreactive bands were then detected by incubating the membrane with secondary antibodies conjugated to horseradish peroxidase (Cell Signaling Technology) and visualized using enhanced chemiluminescence reagents (Bio-Rad, Hercules, CA, United States). The relative protein expression was measured by using the ImageJ software (Image 1.38e) and normalized with the expression of the respective Tubulin.
+ Open protocol
+ Expand
10

Angiotensin II-Induced H9C2 Cell Study

Check if the same lab product or an alternative is used in the 5 most similar protocols
H9C2 cells were cultured with 10% fetal bovine serum (Solarbio, Beijing, China), high-glucose-DMEM (Solarbio, Beijing, China) and antibiotics. GLPs were procured from SEITEbiogle (Chengdu, China). Angiotensin II was from Sigma (A9525, St. Louis, MO, United States). Antibodies against the following proteins were used: PPARγ (Abcam, ab272718, London, United Kingdom, 1:1000), PGC1α (Abcam, ab176328, London, United Kingdom, 1:1000), and β-actin (NCM Biotech, AB1020, Suzhou, Jiangsu, China, 1:1000). BCA protein assay kit was purchased from Beyotime (Shanghai, China), and T0070907 was obtained from Selleck (Houston, Texas, United States).
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!