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Luna 3 mm nh2 100 a

Manufactured by Phenomenex

The Luna 3 mm NH2 100 A is a high-performance liquid chromatography (HPLC) column. It features a 3 mm particle size and a 100 Angstrom pore size. This column is designed for the separation and analysis of a variety of polar and moderately polar compounds.

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2 protocols using luna 3 mm nh2 100 a

1

Metabolite Extraction and Mass Spectrometry Analysis

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Cells were washed three times with 1 × PBS and incubated in DMEM supplemented with 5% dialyzed FBS for 24 h before sample extraction. Cells were rinsed quickly on ice with ice cold 150 mM ammonium acetate (NH4AcO) and scraped off in 1 ml ice cold 80% methanol and collected into Eppendorf tubes. 5 nmol of norvaline was added to the cell suspension as internal control and the tubes were vortexed and spun down at 15,000 rpm for 5 min at 4 °C. Cell pellets were re-extracted with additional 200 µl of cold 80% methanol and supernatants were combined and transferred into glass vials and dried under vacuum. Metabolites were resuspended in 50 µl 70% acetonitrile (ACN) and 5 µl was used for analysis on a Q Exactive Orbitrap Mass Spectrometer (Thermo Scientific) in polarity-switching mode with positive voltage 3.0 kV and negative voltage 2.25 kV. The mass spectrometer was coupled to an UltiMate 3000RSLC (Thermo Scientific) UHPLC system. Mobile phase A was 5 mM NH4AcO, pH 9.9, B was ACN, and the separation achieved on a Luna 3 mm NH2 100 A (150 × 2.0 mm) (Phenomenex) column. The flow was 300 µl/min, and the gradient ran from 15% A to 95% A in 18 min, followed by an isocratic step for 9 minutes and reequilibration for 7 minutes.
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2

Neonatal Heart Metabolite Extraction

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Neonatal hearts were excised and weighed. Hearts were submerged in 500 μl of extraction solution (80% methanol/10 µM trifluoromethanosulfanate) contained in 2 mL tubes containing 1.4 mm ceramic beads. Tubes were placed in a Bead Mill 4 (Fisher brand) to homogenize tissue for 6 min (speed: 6 m/s). Homogenates were transferred to clean tubes and centrifuged at 4 °C for 10 min at 17,000g. For every sample, a supernatant volume that is equivalent to 5 mg of total heart tissue was transferred to a glass vial. Samples in glass vials were dried under an EZ-2Elite evaporator. Metabolites were resuspended in 100 μl 50% acetonitrile (ACN). The analysis was performed on a Q Exactive (Thermo Scientific) in polarity-switching mode with positive voltage 3.5 kV and negative voltage 3.5 kV. The mass spectrometer was coupled to an Vanquish (Thermo Scientific) UHPLC system. Mobile phase A was 5 mM NH4Ac, pH 9.9, B was ACN. Separation was achieved on a Luna 3 mm NH2 100 A (150 × 2.0 mm) (Phenomenex) column kept at a temperature of 40 °C. Injection volume was 10 μl, flow was 200 μl/min, and the gradient ran from 15% A to 95% A in 18 min, followed by an isocratic step for 9 min and re-equilibration for 7 min. Metabolites were detected and quantified as the area under the curve based on retention time and accurate mass (≤ 15 p.p.m.) using MZMine 2.0.
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