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Isq lt gc ms

Manufactured by Thermo Fisher Scientific
Sourced in United States

The ISQ-LT GC–MS is a gas chromatography-mass spectrometry (GC-MS) instrument designed for qualitative and quantitative analysis. It features a linear ion trap mass analyzer and is capable of performing electron ionization (EI) and chemical ionization (CI) techniques.

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4 protocols using isq lt gc ms

1

Extraction and Analysis of Plant Waxes

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The first leaves of 14-d-old plants and spikes from mature plants were dipped twice into 99% HPLC molecular-grade chloroform for 15 s and then 10 s, an internal standard of 0.5 μg.mL–1 tetracosane (C24n-alkane) was then added. Lemma awns were trimmed from the spikes prior to the analysis. Solvent was removed from the wax extracts under a gentle stream of N2. Wax residues were derivatised using N,O-bis(trimethylsilyl)trifluoroacetamide + 1% trimethylcholorosilane (BSTFA + 1% TMCS; Sigma-Aldrich) and excess reagent removed again under N2. The wax constituents were identified by their electron-impact mass spectra (70 eV, m/z 50–950) after capillary GC (Restek Rxi-1HT, 15 m × 0.32 mm, 0.1 μm [Thames Restek Ltd.]) performed on an ISQ-LT GC–MS comprising a 1300 gas chromatograph combined with a single quadrupole mass analyser (Thermo-Fisher Scientific). The samples were injected onto the analytical column at 50 °C, ramping at 0.2 °C s–1 to a maximum of 380 °C, where it was held for 7 min. The flow rate of the He carrier gas was 5 mL min–1. All data were acquired using the XCalibur software suite (Thermo Fisher Scientific). Leaf area and spike length were calculated using ImageJ87 (link).
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2

GC-MS Analysis of Depolymerized Samples

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Data were collected on a Thermo ISQ LT GC-MS in EI mode with an electron energy of 70 eV (Waltham, MA, USA). The column used was a Zebron ZB-5HT (30 m × 0.25 mm inside diameter, 0.25 μm film thickness, Newport Beach, CA, USA). Samples were collected in split mode with a column flow of 1 mL/min, purge flow of 10 mL/min, and a split flow of 10 mL/min. Inlet and ion source temperatures were held at 200 °C and 180 °C respectively. Samples for injection were prepared by diluting one drop of depolymerization NMR sample in 1 mL of methanol and an aliquot (1 μL) of the dilution was injected. The oven starting temperature was 70 °C held for 1 min followed by a ramp of 60 °C/min up to 300 °C which was held for 6 min. Data were collected using Chromeleon software. Mass spectra from peaks in the total ion chromatograph were compared to a NIST database using the software which listed possible matches with %probability. The results are summarized in Table 4.
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3

GC-MS Analysis of Short-Chain Fatty Acids

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The content of SCFAs in the colonic digesta was determined by using an ISQ Lt GC-MS (Thermo Fisher, USA) equipped with a flame ionization detector. A TG WAX column (30 m × 0.25 mm × 0.25 μm, Thermo Fisher) was used to separate the SCFAs. A sample injection volume of 5 μL was automatically injected into the inlet, which was kept at 240°C with a 75:1 split ratio. The carrier gas was helium at a flow rate of 1.0 mL/min. The temperatures of the flame ionization detector (FID, Thermo Fisher) and injector were 250 and 200°C, respectively.
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4

Quantifying Colonic SCFAs in Piglets

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The contents of SCFAs in the piglets’ colonic contents were determined by using an ISQ Lt GC–MS (Thermo Fisher, MA, USA) equipped with a flame ionization detector (FID). A TG WAX column (30 m × 0.25 mm × 0.25 um; Thermo Fisher) was used for separating the SCFAs. An injection volume of 5 μL of sample was automatically injected into the inlet, which was kept at 240 °C with a 75:1 split ratio. The carrier gas was helium at a flow rate of 1.0 mL/min. The FID and injector temperatures were 250 °C and 200 °C, respectively.
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