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7 protocols using permount resin

1

Immunohistochemical Analysis of Inflammasome Proteins

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Each skin sample was formalin-fixed and then embedded in paraffin and sectioned at 4 μm. The histological sections were deparaffinized in xylol, rehydrated in ethanol and blocked with 3% hydrogen peroxide. The tissue sections were then incubated with the primary antibodies polyclonal anti-NLRP1 rabbit antibody (Ab 3683); monoclonal mice anti-NLRP3 (214185); polyclonal anti-AIM2 rabbit antibody (93015); polyclonal anti-IL-18 rabbit antibody (Ab71495); and polyclonal anti-IL-1B rabbit antibody (Ab2105), all of which were from Abcam (Cambridge, MA, USA). The Reveal Biotin-Free Polyvalent HRP system (SPB-999, Spring Bioscience Corp, Pleasanton, CA, USA) was selected as the amplification system, and DAB (3,3’ diamibenzidine, D5637, Sigma) was used for the revelation. Negative reaction controls were obtained by omitting the primary antibody and replacing it with PBS pH 7.4. After mounting the slides with Permount resin (FISHER Scientific, Fair Lawn, NJ/USA), the slides were scanned using an Aperio ScanScope slide scanner (Aperio Technologies, Vista, CA, USA). Then, the images were analyzed with Image-Pro Plus, version 4.5.0.29 (Media Cybernetics Inc., Bethesda, MD, USA).
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2

Floral Developmental Stages Analysis

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Inflorescences containing flowers at several developmental stages were collected at the Instituto de Biociências of Universidade de São Paulo and at the Instituto de Botânica in São Paulo. Vouchers of the species were provided and the vouchers were deposited in the herbarium of the Universidade de São Paulo (SPF). The material was fixed in formalin, acetic acid, 50% ethyl alcohol (FAA) for 24 h [16 ] or by buffered neutral formalin (BNF) for 48 h [17 ], and then stored in 70% ethyl alcohol.
Inflorescence meristems, flower buds, and anthetic and post-anthetic flowers were isolated, dehydrated in a butyl series [16 ], embedded in Paraplast (Fisher Healthcare, Houston, Texas, USA), and transversely and longitudinally sectioned using a Leica RM2145 rotary microtome (Leica Microsystems, Wetzlar, Germany). Serial sections around 12 μm thick were stained with astra blue and safranin [18 ], and mounted in Permount resin (Fisher Scientific, Pittsburgh, Pennsylvania, USA). Samples were observed and photographed using a Leica DMBL light microscope (Leica Microsystems, Wetzlar, Germany).
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3

Histological Analysis of Shoot Apices

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Shoot apices of Asclepias, Ipomoea and Urvillea were isolated and fixed in formalin-acetic acid-50% alcohol (FAA) for 24 h (Johansen, 1940 ) and stored in 70% ethanol. Then, the material was dehydrated in an ascending butyl series (Johansen, 1940 ) and embedded in Paraplast (Leica Microsystems, Heidelberg, Germany). All samples were longitudinally sectioned using a Microm HM340E rotary microtome (Microm, Walldorf, Germany) and then stained with 1% astra blue and 1% safranin (Gerlach, 1984 ). Slides were mounted in Permount resin (Fisher Scientific, Pittsburgh, PA, United States) and photographed using a Leica DMLB light microscope.
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4

Ontogenetic Study of Paullinieae Laticifers

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Three species of tribe Paullinieae were selected for the ontogenetic study of laticifers in shoots (Paullinia seminuda, Serjania caracasana, and Urvillea ulmacea). Vouchers of the collections made for this study were deposited in the SPF herbarium (USP).
Shoots were fixed in formalin-acetic acid-alcohol 50% (FAA) for 24 h (Johansen, 1940 ) or in buffered neutral formalin (Lillie, 1965 ) and then stored in ethanol 70%. Subsequently, shoot apices were isolated, dehydrated in an ascending butyl series (Johansen, 1940 ), and embedded in Paraplast (Leica Microsystems, Heidelberg, Germany). All samples were longitudinally and transversely sectioned using a rotary microtome and then stained with 1% astra blue and 1% safranin in 50% ethanol (Gerlach, 1984 ). Slides were mounted in Permount resin (Fisher Scientific, Pittsburgh, PA, United States) and photographed using a Leica DMLB light microscope.
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5

Immunohistochemical Detection of Leishmania

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The presence or absence of Leishmania after treatment (qualitative histological events) was determined by the presence of amastigote forms, Leishmania antigens detected by immunohisto chemistry.
Silanized slides containing sections of fragments from BALB/c liver and spleen obtained after the treatment of leishmaniasis were submitted to immunohistochemistry for the detection of amastigotes forms. The tissues were deparaffinized in histological sections (4 mm) with xylene, rehydration in a decreasing ethanol series. Immunohistochemistry was performed with anti-Leishmania antibodies produced in rabbits reacted with peroxidase-conjugated goat anti-rabbit IgG (Sigma Chemical Co.). All reactions were developed in the same way using a diaminobenzidine chromogen solution (Sigma Chemical Co., MO, USA-D5637), which precipitates a brown product and counterstaining was performed with Harris hematoxylin. The slides were dehydrated in a growing ethanol series and mounted with Permount resin (Fisher Chemicals, NJ, USA).
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6

Anatomical Analysis of Shoot Apices

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For the anatomical analysis, shoot apices and the subsequent nodes were isolated, fixed in BNF (buffered neutral formalin) in 0.1 M sodium phosphate buffer, pH 7.0 [46 ] for 48 h, dehydrated in a butyl series (tertiary butyl alcohol) [45 ], embedded in Paraplast (Leica Microsystems Inc., Heidelberg, Germany), and sectioned transversely and longitudinally in a Leica RM2145 rotary microtome. The thickness of the sections ranged from 10 to 12 µm. The sections were stained with astra blue and safranin [47 ] and the slides mounted in Permount resin (Thermo Fisher Scientific, Waltham, MA, USA). The observations and the photographic records were performed under a Leica DMLB light microscope (Leica Microsystems Inc., Heidelberg, Germany).
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7

Oocyte Maturation in Mice Across Ages

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Ovaries from CF-1 mice of varying ages (2 weeks, 3 weeks, 5 weeks, and 8 weeks) were collected, submerged, and stored in buffered zinc formalin overnight. Tissues were then moved to 70% ethanol for storage until undergoing a 10-h protocol using a Leica ASP300S enclosed tissue processor. After processing, tissues were embedded in paraffin wax and cooled fully using the Leica EG1150 C/H pair. Embedded tissues were sectioned at 8 µm thickness using a Leica Histocore AutoCut microtome. Representative samples were taken for each age by taking 3 consecutive sections periodically (every 4, 6, 8, or 10 sections respectively). Tissues were stained with Hematoxylin and Eosin (Abcam, # 245880) before being mounted with permount resin (Thermo Fisher Scientific, Inc. # SP15). Oocytes and their corresponding nucleus positioning were examined using 10X or 40X objective on a Leica DMI8 microscope.
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