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Fish skin gelatin

Manufactured by Merck Group
Sourced in United States, Germany, United Kingdom

Fish skin gelatin is a type of gelatin derived from the skin of fish. It is a natural, edible, and biocompatible material that can be used in various laboratory applications. Fish skin gelatin is known for its gelling and stabilizing properties, which make it a useful ingredient in various products and research applications.

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116 protocols using fish skin gelatin

1

Microsporidia Detection in THP-1 Cells

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IFA was performed to ascertain and detect intracellular development of microsporidia in relation to staurosporine induction of apoptosis in individual THP-1 cells. The TMR-red-stained cells were blocked in 0.2 % v/v fish skin gelatin (FSG; Sigma-Aldrich) in TBS for 30 min and then incubated in 10% normal goat serum (NGS; GIBCO) for 40–60 min at room temp. A rabbit polyclonal antiserum raised against a combination of microsporidia species (E. cuniculi, E. intestinalis, E. hellem and V. corneae) was diluted 1:200 in 10% normal goat serum (NGS), centrifuged, and applied to experimental wells for incubation for 60 min at room temperature or overnight at 4 °C. The slides were washed sequentially in TBS containing 0.2% cold water fish skin gelatin (FSG; Sigma-Aldrich) and then TBS containing 0.1% Triton X-100. The cells on slides were then incubated with Alexa 488 (Molecular Probes, Eugene, OR)-conjugated goat-anti-rabbit IgG diluted 1:1000 in 10% NGS for 60 min at room temp. Slides were then rinsed with TBS and counterstained with To-Pro-3 (far red) fluorescent dye (Molecular Probes) to identify host cell nuclei. Slides were examined by inverted confocal laser scanning microscope Leica TCP SP2. Approximately 12–14 optical sections at intervals of 0.3–0.5 µm were recorded for the presence of microsporidia.
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2

Mitochondrial Morphology Imaging and Analysis

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Confocal microcopy was preformed as described (Chang et al., 2011 (link); Lin et al., 2015 (link)). Using transmitted light morphology, tubulin bridge staining, and DNA staining, specific identification of telophase or cytokinetic sibling pairs with exclusion of any spurious neighboring-but-unrelated cell pairs is achieved (Lin et al., 2015 (link)). For fixed cell imaging, cells were adhered to poly-l-lysine (Sigma) coated coverslips (#1.5 Thermo Fisher) and treated with freshly prepared 3.7 % PFA (Sigma) diluted in cell culture media (pH 6.8) in order to preserve mitochondrial morphology and MitoTracker Red FM fluorescence intensity. Following brief treatment with 0.1% triton cells were stained with antibody against α-Tubulin (clone YOL1/34 Abcam; 1:300) and then anti-rabbit antibody conjugated to AlexaFluor568 (Thermo Fisher) in a PBS solution containing 0.01 % saponin and 0.25 % fish skin gelatin (Sigma). For live cell imaging, cells were transferred to poly-l-lysine coated 8-chambered coverglass wells (#1 LabTek) in warm cell culture media and allowed to adhere briefly before imaging. Images were acquired on inverted confocal microscopes (Zeiss LSM710 or Nikon Ti Eclipse) and processed using ImageJ (v.1.46r) or Fiji (v.2.0) software. Total fluorescence in defined regions of single cells was quantitated using the integrated density function in ImageJ.
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3

Immunohistochemical Characterization of Placenta

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Placenta samples were fixed in neutral-buffered formalin for 3 days, processed, embedded in paraffin, and sectioned (5 μM-thick) for immunohistochemistry. Sections were blocked with 2% goat serum and 0.2% fish skin gelatin (Sigma) in 1X PBS for an hour at room temperature, then incubated with primary antibodies (rabbit anti-MTA3 antibody, mouse anti-hCG antibody (clone 5H4-E2), mouse anti- HLAG antibody (clone 4H84), all from Abcam; mouse anti-Ki67 antibody from Dako; or nonspecific mouse or rabbit IgG as negative controls) at 4 °C overnight. After three washes with 1X PBS with 0.1% Tween-20, sections were incubated with secondary antibodies (Alexa Fluor 488- or 568-conjugated goat anti-mouse or anti-rabbit, from Invitrogen) and DAPI for one hour at room temperature, then mounted with anti-fade mounting solution (Invitrogen) and examined using a Leica fluorescence microscope. Adjacent sections were also stained using hematoxylin and eosin, according to standard protocols, and examined using an Olympus light microscope.
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4

Immunofluorescence Staining of Flag-tagged Proteins

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HeLa cells were cultured on glass coverslips in 24-well plates at a density of 3x 104 cells per well. 24 h after transfection the cells were rinsed with PBS, fixed with 4% PFA and permeabilized with 0.1% Triton-X100 in PBS. Fish skin gelatin (0.2% in PBS; Sigma-Aldrich, Munich, Germany) was used for blocking of nonspecific antibody binding sites. Flag-tagged proteins were detected with the anti-Flag M2 antibody (1:400) and a secondary goat anti-mouse Alexa594 antibody (Invitrogen/Molecular Probes, 1:1000). Nuclei were stained with Hoechst33342 (Roth, Karlsruhe, Germany, 1:10000). Cover slides were mounted with Mowiol. Pictures were taken using a Leica AF6000 fluorescence microscope. 80 cells were counted per preparation.
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5

Immunofluorescent Detection of S. aureus in Nasal Tissue

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To detect S. aureus, 10 μm cryostat sections of nasal tissue were fixed (4% Formaldehyde), blocked (2% Goat serum, Sigma-Aldrich; 0.1% cold Fish Skin Gelatin; 1% bovine serum albumin, Sigma-Aldrich; 0.1% Triton X-100; 0.05% Tween-20; diluted in 1X phosphate buffered saline PBS, ThermoFisher Scientific), and incubated with rabbit polyclonal S. aureus antibody (ab20920, Abcam) 1:5000 dilution over night at 4 °C followed by Alexa Fluor 546® goat anti-rabbit IgG (A-11010, Molecular Probes™, Thermo Fisher Scientific) 1:1000 dilution labeling, or Alexa Fluor 488® goat anti-rabbit IgG (A-11008, Molecular Probes™, Thermo Fisher Scientific) 1:1000 dilution labeling for 30–60 min. The slides were incubated with DRAQ5 1:1000 (BioStatus) to stain keratinocyte nuclei, and Alexa Fluor 594 Phalloidin (A12381, Molecular Probes™, Thermo Fisher Scientific) 1:40 dilution for staining actin red. The samples were dried and the glass slides mounted by adding Prolong Gold Antifade reagent with DAPI (P36935, Molecular Probes™, Thermo Fisher Scientific). Samples were stored at +4 °C before immediate microscopy.
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6

Immunofluorescence Staining of 2D and 3D Cell Cultures

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Cells were fixed in 4% PBS (Fisher Scientific UK, 12579099)-paraformaldehyde for 15 min, incubated in 0.1% Triton-X-100 (Fisher Scientific UK, 11471632) for 5 min on ice, then in 0.2% fish skin gelatin (Sigma, G7041) in PBS for 1 h and stained for 1 h with an anti-E-cadherin (1:100, Santa Cruz sc-21791, mouse monoclonal 67A4) antibody. Protein expression was detected using Alexa Fluor 488 (1:400: Fisher Scientific UK) for 20 min. TO- PRO-3 (Invitrogen, T3605: 1:1000) was used to stain nucleic acids. For immunofluorescence staining of 3D cultures from MCF10A ER:HRAS V12 cells, acini were fixed with 4% paraformaldehyde for 40 min, permeabilized in 0.5% Triton X-100 for 10 min on ice and stained with Rhodamine-phalloidin (Molecular Probes, R415) for 1 h at room temperature. Acini were counterstained with DAPI. Samples were observed using a confocal microscope system (Carl Zeiss LSM 510 or LSM 710, or Leica SP8). Acquired images were analyzed using Photoshop (Adobe Systems, United States) according to the guidelines of the journal.
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7

Immunofluorescence Staining of Giardia Parasites

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Gairdia parasites were iced for 30 min and pelleted at 700 x g for 7 min. The pellet was fixed in PME buffer (100 mM Piperazine-N,N’-bis (ethanesulfonic acid) (PIPES) pH 7.0, 5 mM EGTA, 10 mM MgSO4 supplemented with 1% paraformaldehyde (PFA) (Electron Microscopy Sciences, Hatfield, PA), 100 µM 3-maleimidobenzoic acid N-hydroxysuccinimide ester (Sigma-Aldrich), 100 µM ethylene glycol bis (succinimidyl succinate) (Pierce), and 0.025% Triton X-100 for 30 min at 37°C. Fixed cells were attached on polylysine coated coverslips. Cells were washed once in PME and permeabilized with 0.1% Triton X-100 in PME for 10 min. After two quick washes with PME, blocking was performed in PME supplemented with 1% bovine serum albumin, 0.1% NaN3, 100 mM lysine, 0.5% cold water fish skin gelatin (Sigma-Aldrich). Next, 1:200 diluted Alexa 647-conjugated anti-CWP1 antibody (Waterborne, New Orleans, LA) was incubated for 1 h. Cells were washed three times in PME plus 0.05% Triton X-100. Coverslips were mounted with ProLong Gold antifade plus 4’,6-diamidino-2-phenylinodole (DAPI; Molecular Probes). Images were acquired on a DeltaVision Elite microscope using a 60X, 1.4-numerical aperture objective with a PCO Edge sCMOS camera, and images were deconvolved using SoftWorx (API, Issaquah, WA).
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8

Western Blotting Analysis of CD20, MKL1, and GAPDH

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Western blotting was performed as previously described [35 (link)], except 5% fish skin gelatin (Sigma) and 2% Bovine Serum Albumin (Thermo Scientific) in Dulbecco’s PBS was used as a blocking buffer. Antibodies included: rabbit αCD20 antibody (Thermo Scientific); rabbit αMKL1 (Bethyl Laboratories, Waltham, MA, USA); and mouse αGAPDH (R&D systems, Minneapolis, MN, USA) was used as load control. Fluor-conjugated secondary antibodies from LiCOR were used as needed. Detection was carried out on a LiCOR Odyssey to visualize immunoreactive bands (LI-COR Biosciences, Lincoln, NE, USA). Protein levels were quantified using NIH Image 1.61.
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9

Visualizing HCV Envelope Protein E2

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Raji cells were transfected with HCV RNA and cell-free supernatant was harvested 96 h post transfection and concentrated via ultracentrifugation. Grids were washed on drops of PBS, fixed with 3% paraformaldehyde in PBS and blocked in a solution of 0.8% BSA, 1% cold water fish skin gelatin (Sigma) and 20 mM Glycine in PBS. Immunogold labelling was performed with an antibody directed against E2 (CBH5) diluted 1:50 in blocking solution, and Protein A coupled to 10 nm gold particles. After extensive washing with PBS and a quick rinse with distilled water, grids were stained with a solution consisting of 9 parts 2% Methyl Cellulose and 1 part 3% Uranyl acetate (both aqueous solutions).
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10

Immunohistochemical Analysis of Paraffin Sections

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Paraffin embedded organotypic sections were dewaxed and rehydrated. Heat induced epitope retrieval in citrate buffer (pH = 6) was used for all antibodies. Sections were permeabilized with 0.2% TritonX-100 and blocked with 2% bovine serum albumin (#K45-001; PAA laboratories), 0.02% fish skin gelatin (#G7765; Sigma), 10% FBS (#A15-104; PAA laboratories).
Primary antibodies were incubated at 4 °C overnight. Fluorescent-labelled appropriate secondary antibodies (Alexa fluor® 488, 546) were incubated at room temperature for 1 h and nuclei were counterstained with DAPI. Controls were uniformly negative with appropriate isotype-specific immunoglobulin at matching dilution. Images were acquired and analysed using confocal microscopy (Carl Zeiss LSM 510).
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