The largest database of trusted experimental protocols

5 protocols using ab217798

1

Detecting NOD1 Expression in COPD Mice

Check if the same lab product or an alternative is used in the 5 most similar protocols
In order to detect the expression of NOD1 in the COPD mouse model, immunohistochemistry was performed. Primary antibody against of NOD1 (ab217798, 1:200 dilution) was purchased from Abcam (Cambridge, UK). Paraffin section was performed as previously described.36 Imaging was conducted by using a Zeiss LSM 710 Confocal microscope (Carl Zeiss, Jena, Germany) with appropriate filter sets.
+ Open protocol
+ Expand
2

Western Blot Analysis of Inflammatory Signaling

Check if the same lab product or an alternative is used in the 5 most similar protocols
After 48 h of incubation, cells were washed by cold PBS three times and lysed on ice with whole cell lysate for 10 min. Proteins contained were quantitated by BCA protein assay kit (Thermo Fisher Scientific, Waltham, MA, USA). A measure of 30 µg of total proteins were then separated by polyacrylamide gel electrophoresis (PAGE) at a constant voltage of 80 V for 35 min followed by 120 V for 45 min, and sequentially transferred onto the polyvinylidene fluoride (PVDF) membranes (Amersham, USA) after electrophoresis. The membranes were blocked with 5% skim milk at room temperature for 1 h. Afterwards, the membranes were incubated overnight at 4 ℃ with primary rabbit polyclonal antibodies containing ANGPT2 (ab155106, 1:1000, abcam, Cambridge, UK), NOD1 (ab217798, 1:1000, abcam), NOD2 (ab36836, 1:1000, abcam), NF-κB (ab194729, 1:1000, abcam) and GAPDH (ab9485, 1:2500, abcam). Then, the membranes were incubated with secondary antibody, horse radish peroxidase-labeled goat anti-rabbit IgG H&L (HRP) (ab6721, 1:2000, abcam) for 1 h. Protein bands were visualized under the optical luminescence instrument (GE, USA), and were quantified by gray scale scanning using the Image Pro Plus 6.0 software (Media Cybernetics, USA).
+ Open protocol
+ Expand
3

Western Blot Analysis of Immune Proteins

Check if the same lab product or an alternative is used in the 5 most similar protocols
The whole cell lysates (Beyotime, Shanghai, China) were used to harvest total protein. The equal amount of protein extract was then separated by SDS-PAGE and transferred electrophoretically to polyvinylidene difluoride membrane. Subsequently, membranes were blocked in 5% non-fat dry milk. The membranes were incubated with the appropriate dilutions of primary antibodies against NOD1 antibody (1:1000, ab217798, Abcam, Cambridge, MA, US), BAK1 (1:1000, ab32371, Abcam, Cambridge, MA, US), NLRP6 (1:1000, ab58705, Abcam, Cambridge, MA, US), and GAPDH (1;1500; Abcam, Cambridge, MA, USA) antibody sampler kit (9782 T) at 4 °C. The more detailed steps have been illustrated as previously described [24 (link)].
+ Open protocol
+ Expand
4

Western Blot Analysis of Inflammatory Markers

Check if the same lab product or an alternative is used in the 5 most similar protocols
The tissues and cells were lysed in ice-cold radio-immunoprecipitation assay buffer to extract the total proteins. The proteins were separated using sodium dodecyl sulfate–polyacrylamide gel electrophoresis, and shifted to polyvinylidene fluoride membranes. After blocking in 5% non-fat milk for 1 hour at room temperature, the membranes were probed with primary antibodies against SAAL1 (PA5-83445, Invitrogen, USA), TNF-α (ab183218, Abcam, USA), IL-6 (ab259341, Abcam, USA), IL-1β (ab254360, Abcam, USA), NLRP3 (ab263899, Abcam, USA), NOD1 (ab217798, Abcam, USA), mitogen-activated protein kinase 1 (MAPK 1) (ab170099, Abcam, USA), marker of proliferation Ki-67 (Ki67) (ab15580, Abcam, USA), caspase-1 (ab16883, Abcam, USA), Bcl2 associated X protein (Bax) (ab32503, Abcam, USA), B-cell lymphoma-2 (Bcl-2) (ab182858, Abcam, USA), glyceraldehyde 3-phosphate dehydrogenase (GAPDH; ab8245, Abcam, USA), and corresponding secondary anti-mouse (ab205719, Abcam, USA), and anti-rabbit (ab205718, Abcam, USA) antibodies. The visualization of the targeted protein bands was realized by reaction with Enhanced chemiluminescence reagent (Millipore, Germany).
+ Open protocol
+ Expand
5

Western Blot Analysis of Lung Proteins

Check if the same lab product or an alternative is used in the 5 most similar protocols
Lung tissues were harvested and homogenized by using LabGEN 125 Homogenizer (Cole-Parmer, Vernon Hills, USA), and then lysed by the Beyotime RIPA buffer supplemented with fresh protease inhibitor cocktails (Promega, Madison, USA). Total protein concentration was determined by Pierce™ BCA Protein Assay Kit. Target proteins were detected by Western blot as described previously.35 (link) Primary antibodies against NOD1 (ab217798, 1:1500 dilution), TLR4 (ab22048, 1:1000 dilution) and total p65 (ab32536, 1:1500 dilution) were ordered from Abcam (Cambridge, UK); p-p65 (#3033, 1:1000 dilution) and β-actin (#4970, 1:2000 dilution) were obtained from Cell Signaling Technology, Inc. (Danvers, USA).
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!