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Anti mmp 1

Manufactured by Santa Cruz Biotechnology
Sourced in United States

Anti-MMP-1 is a laboratory reagent used to detect and quantify the presence of Matrix Metalloproteinase-1 (MMP-1) in biological samples. MMP-1 is an enzyme involved in the degradation of the extracellular matrix. This product provides a tool for researchers to study the role of MMP-1 in various biological processes and disease states.

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12 protocols using anti mmp 1

1

Molecular Mechanisms of Chondroprotection

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Trichostatin A (TSA), MIA, and mouse recombinant interleukin (IL)-1β were obtained from Sigma-Aldrich (St. Louis, MO, USA). Anti-matrix metalloproteinase (anti-MMP)-13, anti-MMP-3, anti-MMP-1, and anti-histone 3 antibodies were obtained from Santa Cruz Biotechnology (Santa Cruz, CA, USA). Anti-HO-1, anti-NQO1, and anti-Nrf2 antibodies were purchased from Bioworld Technology (Nanjing, China). Antiacetylated Nrf2 (K599) was obtained from ImmunoWay Biotechnology (Newark, DE, USA), and antiacetylated histone H3 was purchased from EMD Millipore (Billerica, MA, USA).
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2

Investigating EMT and Signaling Pathways

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DSF was purchased from Sigma (USA) and dissolved in DMSO. TGF-β was purchased from Peprotech (USA) and dissolved in 10 mM citric acid, PH3.0 to a concentration of 0.1–1.0 mg/ml. U0126 was purchased from Selleck Chemicals (USA) and dissolved in 10% DMSO, 30% Cremophor EL and 60% PBS to a concentration of 10 mM.
The following primary antibodies were used: anti-E-cadherin (WB: 1:1000, IF:1:200, IHC:1:400 dilution, CST), anti-vimentin (WB: 1:1000, IF:1:100, IHC:1:100 dilution, CST), anti-N-cadherin (WB: 1:1000 dilution, CST), anti-Snail (WB: 5 ng/ml, IF:10 μg/ml, IHC: 10 μg/ml, R&D Systems), anti-NF-κB/p65 (WB: 1:1000, IF:1:50, IHC:1:800 dilution, CST), anti-ERK (WB: 1:500, IF:1:50, IHC:1:50, dilution, Boster, Wuhan, China), anti-p-ERK (WB: 1:1000, IF:1:200, IHC:1:400 dilution, CST), anti-IκB-α (WB:1:500, IF: 1:50, IHC:1:50 dilution, Anbo, USA), anti-CD24 (WB: 1:200, IF:1:50 dilution, Santa Cruz), anti-CD24 (IHC:1:50 dilution, Abcam), anti-CD44 (WB:1:1000, IF:1:200, IHC:1:50 dilution, CST), anti-MMP-1 (WB:1:200 dilution, Santa Cruz), anti-MMP-3 (WB:1:200 dilution, Santa Cruz).
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3

Berberine Regulation of Signaling Pathways

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Berberine, dimethyl sulfoxide (DMSO), Tris-HCl, trypan blue, trypsin, propidium iodide (PI), gelatin, Coomassie blue R-250, and PLX4032 were purchased from Sigma Chemical Co. (St. Louis, MO, USA). Fetal bovine serum (FBS), Minimum Essential Medium (MEM) culture medium, and penicillin-streptomycin were purchased from Invitrogen (Carlsbad, CA, USA). Primary antibody anti-MMP-1, -MMP-2, and -MMP-13 were obtained from Santa Cruz Biotechnology (Santa Cruz, CA, USA) and anti-TIMP-1, -E-cadherin, -N-cadherin, -RhoA, -ROCK-1, -SOS-1, -GRB2, -Ras, -p-ERK1/2, -p-c-Jun, -PKC, -p-FAK, -PI3K, -p-AKT, NF-κB, -uPA, and the peroxidase conjugated secondary antibodies were purchased from Cell Signaling Technology, Inc. (Beverly, MA, USA). Berberine was dissolved in DMSO as a carrier solvent and control cultures were 0.5% DMSO. Berberine was further diluted in a culture medium to the appropriate final concentrations prior to use.
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4

Circadian Rhythm Protein Analysis

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The cells were lysed with RIPA lysis buffer (Millipore-Sigma, Billerica, MA, USA) containing protease inhibitors (Millipore-Sigma). Protein concentration was determined by BCA assays, and 30 µg cell lysates were resolved by SDS-PAGE on 4–12% gradient Bio-Tris gels, transferred to nitrocellulose membranes (Thermo Fisher Scientific), and probed with each of the following antibodies: anti-CLOCK, anti-BMAL1, anti-TIMP3, anti-C/EBP-α, anti-C/EBP-β, anti-TNF-α, anti-NF-κB, anti-phospho-NF-κB, and anti-I-κB (Cell Signaling Technology, Beverly, MA, USA); anti-MMP-1 (courteously provided by Prof. Jin Ho Chung, Seoul National University College of Medicine, Seoul, South Korea); and GAPDH and horseradish peroxidase–conjugated secondary anti-rabbit IgG (Santa Cruz Biotechnology, Dallas, TX, USA). Western blotting luminol reagent (Santa Cruz Biotechnology) was used to develop the signals. For zymogram analysis, the cultured medium was harvested every 4 or 12 h after synchronization or UV irradiation and loaded on 10% Zymogram (gelatin) Protein Gels (Thermo Fisher Scientific). The gels were incubated at 37°C overnight and stained with 0.5% Coomassie blue (Millipore-Sigma) according to the manufacturer’s instructions.
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5

Quantification of MMP-1 and Procollagen in Cells

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Acetonitrile (HPLC grade) and glacial acetic acid (99.0 % purity) were obtained from Duksan Pure Chemicals Co. (Ansan, South Korea). High purity nitrogen gas was provided by Shinyang Oxygen Co. (Seoul, South Korea). L-ascorbic acid was purchased from Sigma-Aldrich (St Louis, MO, USA). An MMP-1 immunoassay ELISA kit was purchased from Calbiochem Inc. (Darmstadt, Germany), and a type-1 procollagen immunoassay ELISA kit was purchased from Takara Bio Inc. (Otsu, Japan). Protease and phosphatase inhibitor cocktails were purchased from Roche (Mannheim, Germany). Western Blot was performed using following antibodies: anti-MMP-1 from Santa Cruz Biotechnology, Inc. (Santa Cruz, CA, USA), type-1 procollagen from Abnova Corporation (Taipei, Taiwan), and β-actin from Santa Cruz Biotechnology, Inc.
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6

Western Blot Analysis of MMPs

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Western blot assays were carried out as previously described [25 (link)]. The protein from primary human chondrocytes was isolated after 24 h of treatment. The primary antibodies used were rabbit polyclonal anti-MMP1 (1:500), anti-MMP2 (1:500), anti-MMP13 (1:500), anti-glyceraldehyde-3-phosphate dehydrogenase (GAPDH) (1:1000), goat polyclonal anti-MMP3 (1:500), mouse monoclonal anti-MMP9 (1:1000; Santa Cruz Biotechnology, Inc.), and anti-SRY-related high mobility group-box gene9 (SOX9) (1:2000; Millipore).
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7

Quantifying Liver Fibrosis Markers

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The Western blotting procedure is similar to our previous reports [17 (link), 23 (link)]. Briefly, the liver tissue from the rat model was lysed in RIPA buffer containing a proteinase inhibitor cocktail (Biocolor BioScience & Technology, Shanghai, China). The protein concentration was determined using bicinchoninic acid (Bioss, Beijing, China). Protein was loaded at 30 μg/gel each lane, separated on 10% SDS-PAGE and transferred to nitrocellulose membranes. The blots were incubated with rabbit primary antibodies anti-MMP-1 (1:1000, sc-241561) or TIMP-1 (1:1000, sc-5538) (Santa Cruz Biotech, USA) and anti-GAPDH (rabbit monoclonal antibody, 1:1000, Ab181602, Abcam, UK) at 4 °C overnight, then washed extensively with 0.1% Tween-20 in PBS and incubated with a secondary antibody conjugated to horseradish peroxidase (1:5000; sc-2004, Santa Cruz, USA) at room temperature for 3 h. The blot was visualized using the ECL system (Amersham, UK).
The serum levels of Smad7, collagen I, collagen III, laminin and hyaluronic acid were detected using ELISA according to the manufacturer’s instruction. The ELISA kits for Smad7 (# CSB-E09225r) and hyaluronic acid (# CSB-E08120r) were purchased from CUSABIO Technology LLC (Wuhan, China), and the kits for collagenase I (# CX20064), collagenase III (# kt210320) and laminin (# KT20202) were from MSKBIO (Wuhan, China).
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8

Apoptotic Pathway Protein Expression Analysis

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Western blot analysis was carried out to examine the expression of proteins involved in the apoptotic pathway. To perform this assay, 75,000 cells/mL were seeded and treated with ST compounds (10 nM, 20 nM, 40 nM, 60 nM, 80 nM) for 48 h and whole cell lysate was prepared using RIPA buffer (25 mM Tris-Cl pH 7.6, 150 mM Sodium chloride, 1% NP-40, 1% Sodium deoxycholate, 1% Sodium Dodecyl Sulphate, 1 mM Phenylmethylsulphonyl fluoride, 1 mM Sodium orthovanadate). Crude cell lysates (30–40 μg) were electrophoresed on SDS-PAGE (Sodium dodecyl sulfate-polyacrylamide gel electrophoresis) and were transferred on to Polyvinylidene fluoride membrane (Millipore, USA) to probe with respective antibodies. The primary antibodies against caspase 9, cleaved caspase 9, caspase 3, cleaved caspase 3, caspase 8 and Horseradish peroxidase-labeled secondary anti-rabbit antibodies were purchased from Cell Signalling Technology, Beverly, MA. Anti-tubulin, Anti-MMP1 and its secondary mouse antibody were purchased from Santa-Cruz Biotechnology, Santa Cruz, CA. The membrane was probed with appropriate antibodies and was developed using chemiluminescence reagent (Clarity Western ECL blotting substrate, Biorad). The blot image was captured by using a Syngene G: Box gel doc system. Protein band image quantification was done using GelQuant. Net, Biochem Lab solutions.
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9

Biochemical Profiling of 143B EMV Cargo

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To determine the biochemical composition of the 143B EMV cargo, Western blot analyses were performed according to the previously described method [30] (link). 143B EMVs were homogenized in Tris lysis buffer (20 mM Tris, 137 mM NaCl, 1% Triton X-100, 10% glycerol, 1 mM PMSF, and 1 mM DTT). Crude lysates of 143B cells (12.5-25 μg) and EMVs (25-40 μg) were denatured in sodium dodecyl sulfate sample buffer, electrophoresed on 12% denaturing polyacrylamide gels, and visualized by Ponceau stain. For immunoblot analysis, the proteins from the gel were transferred on to a polyvinylidene fluoride (PVDF) membrane and incubated with the following primary antibodies: anti–MMP-1 and anti–MMP-13 (Santa Cruz Biotechnology, Inc. (Santa Cruz, CA, USA); 200 μg/ml each) at 1:200, anti-CD-9 (SBI: System Biosciences (Mountain View, CA, USA); 0.25 mg/ml) at 1:1000, and anti-RANKL and anti–TGF-β (GeneTex (Irvine, CA, USA); 1 mg/ml) at 1:1000 dilution. Detection of the immunostained bands was done by ECL chemiluminescence detection system (Thermo Scientific, Rockford, IL). Image acquisition was done using LabWorks Image Acquisition and Analysis Software 4.6.00.0 (UVP Bioimaging Systems, Upland, CA) and Image Lab software for the ChemiDoc MP system (Bio-Rad Laboratories) at incremental exposure time frame of 15, 30, 60, 180, and 300 seconds.
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10

Western Blot Analysis of Cellular Signaling

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Western blot analyses were performed as previously described [18 (link)]. Briefly, cells were lysed and sonicated in RIPA buffer (Thermo Scientific, IL, USA). Equal amounts of protein were subjected to sodium dodecyl sulfate polyacrylamide gel electrophoresis (SDS-PAGE). After electrophoretic separation, protein bands were transferred to a Millipore Immobilon-P membrane followed by immunoblotting with antibodies against molecules of interest. The following primary antibodies were used for immunoblotting: anti-Smad2 (Cell Signaling, MA, USA, 1:1000), anti-p-Smad2 (Cell Signaling, 1:1000), anti-Smad3 (Cell Signaling, 1:1000), anti-p-Smad3 (Cell Signaling, 1:1000), anti-Akt (Cell Signaling, 1:1000), anti-p-Akt (Thr308 and Ser473) (Cell Signaling, 1:1000), anti-S6K (Cell Signaling, 1:1000), anti-p-S6K (Cell Signaling, 1:1000), anti-α-SMA (SIGMA, 1:2000), anti-fibronectin (Abcam, 1:1000), anti-vinculin (SIGMA, 1:1000), anti-paxillin (BD Bioscience, 1:1000), anti-MMP1 (Santa Cruz Biotechnology, CA, USA, 1:1000) and anti-GAPDH (Santa Cruz Biotechnology, 1:5000) antibodies. Chemiluminescence detection was performed using ECL reagent (Bio-Rad Laboratories. Inc., CA, USA). The signal intensities of bands were quantified with ImageJ software (NIH).
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