The largest database of trusted experimental protocols

15 protocols using phospho erk

1

Western Blot Analysis of Extracellular Vesicles

Check if the same lab product or an alternative is used in the 5 most similar protocols
Cells and EV pellet were lysed, then stored at −80°C. Lysates (30 μg) were resolved using 10% SDS/PAGE, and proteins were transferred to nitrocellulose membrane. Membranes were incubated with primary antibody (TF: EPR8986, Abcam; phospho-ERK: E10, actin: 8H10D10, and flotillin: C42A3, Cell Signaling Technologies, Danvers, MA, USA; ERK: 16/ERK, BD Biosciences; CD9: C-4, Santa Cruz, Santa Cruz, CA, USA) overnight at 4°C, and then horseradish peroxidase-conjugated secondary antibody for 1 h. Signal was detected using chemiluminescent substrate (Thermo Scientific) and imaged by film or imager (BioSpectrum Imaging System, UVP, Upland, CA, USA). Experiments were duplicated two to three times using different lysates and EV preparations.
+ Open protocol
+ Expand
2

Protein Extraction and Western Blot Analysis

Check if the same lab product or an alternative is used in the 5 most similar protocols
The total proteins of tissues and cell samples were extracted using a radioimmunoprecipitation assay buffer (Solarbio. Equal amounts of protein (20 μg) were separated by sodium dodecyl sulfate–, Beijing, China)polyacrylamide gel electrophoresis and then transferred to polyvinylidene fluoride membranes (Millipore, MA, USA). After blocking with 5% bovine serum in TBST, the membranes and corresponding primary antibodies were incubated overnight in a shaker at 4°C. The primary antibodies used were as follows: anti-GAPDH (1:10,000, ProteinTech, Wuhan, China), anti-HSF2BP (1:1000, Abcam, USA), ERK (1:500, Abcam, USA), phospho-ERK (1:500, Abcam, USA), JNK (1:1,000, Abcam, USA), phospho-JNK (1:1,000, Abcam, USA), p38 (1:1,000, Abcam, USA), and phospho-p38 (1:1,000, Abcam, USA). After incubation with horseradish peroxidase-conjugated secondary antibodies (1:10,000, ProteinTech, Wuhan, China) at room temperature for 1 h, the membranes were visualized using the enhanced chemiluminescence method (Thermo, MA, USA) with a chemiluminescent detection system (Tanon, Shanghai, China).
+ Open protocol
+ Expand
3

Polysaccharide Modulation of Microglia

Check if the same lab product or an alternative is used in the 5 most similar protocols
PSP contained 72.12% carbohydrate (Mw = 20.48 KDa) which was obtained from Shanghai Yuanye Bio-Technology Co., Ltd. (Shanghai, China). Infrared spectroscopy showed that the PSP samples had typical polysaccharide structure characteristics.
The BV2 mouse microglial line was purchased from Wuhan Sunncell Bio-Technology Co., Ltd. (Wuhan, China); fetal bovine serum (FBS) and Dulbecco’s modified Eagle’s medium (DMEM) from Gibco (Grand Island, NE, USA); lipopolysaccharides (LPS) from Sigma (St. Louis, MO, USA); enzyme-linked immunosorbent assay (ELISA) kits for tumor necrosis factor (TNF-α), interleukin (IL)-6, IL-1β, and IL-10 from Jianglai Biological Technology Co., Ltd. (Shanghai, China); and the Nitric Oxide (NO) assay kit, CCK-8 assay kit, and DCFH-DA Reactive Oxygen (ROS) Fluorescent Probe from Solarbio Science and Technology Co., Ltd. (Beijing, China). Antibodies targeting iNOS, BDNF, ERK, Phospho-ERK, CREB, Phospho-CREB, TrkB, and Phospho-TrkB from Abcam (Cambridge, UK); antibody targeting Arginase-1 from Cell Signaling Technology (Boston, MA, USA); antibodies targeting Iba-1, Notch1, and Hes1 from Santacruz Biotechnology (Santa Cruz, CA, USA); goat anti-rabbit AlexFluor 488® secondary antibodies from Servicebio Co., Ltd. (Shanghai, China); and CD16/CD32 monoclonal antibody PE and CD206 (MMR) monoclonal antibody PE from Ebioscience (San Diego, CA, USA).
+ Open protocol
+ Expand
4

Western Blot Analysis of Phospho-ERK and Total ERK

Check if the same lab product or an alternative is used in the 5 most similar protocols
For western-blot, protein was collect by lysing the cells with RIPA buffer on ice for 30 min. Then, 25 μg of lysate was added to SDS-PAGE and transferred to PVDF membrane (Millipore, USA). Membrane were blocked with 10% non-fat milk in PBS with 0.01% Tween 20 (1 h, 37 °C), then incubated with the first antibody overnight at 4 °C. First antibodies were used as the following dilutions: GAPDH (Abcam, USA) at 1:10,000, phospho-ERK (Abcam, USA) at 1:1000 and total ERK (Abcam, USA) at 1:2000. Then, washed three times in PBS/0.01% Tween 20, followed by incubating in secondary antibody (1 h, 37 °C). After washing three times, protein bands in the PVDF membrane was detected using an enhanced chemiluminescence (ECL) substrate (Pierce, Thermo Fisher Scientific, USA), and protein bands were visualized via film exposure. GAPDH expression was used as an internal control. The protein expression level was determined by band density with Quantity One software (Bio-Rad, USA).
+ Open protocol
+ Expand
5

Smooth Muscle Cell Proliferation Assay

Check if the same lab product or an alternative is used in the 5 most similar protocols
PRF was obtained from Anhui Joyfar Pharmaceutical Co., Ltd, (Bozhou, China), while Dulbecco’s modified Eagle’s medium (DMEM)/F12 and fetal bovine serum (FBS) were purchased from Life Technologies (Carlsbad, CA, USA). Dimethyl sulfoxide (DMSO), MTT and recombinant human PDGF-BB were purchased from Sigma-Aldrich (St. Louis, MO, USA). Mouse anti-cyclin D1, proliferating cell nuclear antigen (PCNA), cyclin-dependent kinase (CDK) 4, α-SMA, desmin, smoothelin, phospho-protein kinase B (Akt), total Akt, phospho-ERK, total ERK, glyceraldehyde 3-phosphate dehydrogenase (GAPDH) antibodies and rabbit anti-mouse secondary antibodies were obtained from Abcam (Cambridge, UK).
+ Open protocol
+ Expand
6

Western Blot Analysis of Protein Signaling

Check if the same lab product or an alternative is used in the 5 most similar protocols
Cells were lysed in RIPA buffer (50 mmol/L Tris–HCl, 150 mmol/L NaCl, pH 8.0, 0.1% SDS, 1% Triton X-100, and 1% deoxycholate) with a complete protease inhibitor from Roche (Basel, UK) for 10 min on ice. Concentrations of the total protein extracts were measured using a Bio-Rad DCTM protein assay kit. Then, the protein samples (30 µg) were separated by SDS–PAGE and transferred to nitrocellulose (NC) membranes. The membranes were incubated with various primary antibodies, including phospho-AKT (CST), phospho-ERK (CST), and KEAP1 (Abcam) at a 1:1000 dilution and GAPDH (Santa Cruz) at a 1:2000 dilution, overnight at 4 °C. After washing the membranes 3 times (5 min/time) with TBST buffer, the appropriate anti-rabbit or anti-mouse secondary antibodies (CST) were incubated with the membranes at 1:10,000 dilution at room temperature for 1 h. GAPDH was used as a loading control.
+ Open protocol
+ Expand
7

Investigating FAK Signaling Pathway

Check if the same lab product or an alternative is used in the 5 most similar protocols
Antibodies specific for the following proteins and tags were used: FAK (Abcam, #ab76496), ZDHHC5 (CST, #79842), β-actin (Proteintech, #81115–1-RR), Ubiquitin (CST, #20326), Flag (Abcam, #ab205606), Myc (Abcam, #ab9106), HA (CST, #3724), phospho-FAK (Abcam, #ab81298), Paxillin (Abcam, #ab32084), phospho-Paxillin (Abcam, #ab109547), AKT (Abcam, #ab8805), phospho-AKT (Abcam, #ab81283), ERK (Abcam, #ab184699), phospho-ERK (Abcam, #ab201015), α-Tubulin (Proteintech, #11,224–1-AP), ATP1A1 (Abcam, #ab7671), E-cadherin (Abcam, #ab219332), N-cadherin (Abcam, #ab18203), snail (Sigma-Aldrich, #SAB5700703), slug (Sigma-Aldrich, #SAB5700672), and β-catenin (Abcam, #ab32572).
The following reagents were used: MG132 (Beyotime, #S1748), cycloheximide (Sigma-Aldrich, #66–81-9), 2-bromopalmitate (Sigma-Aldrich, #238442), palmostatin B (Sigma-Aldrich, #178501), DMSO (Beyotime, #ST038), MeO-PEG-Mal (Sigma-Aldrich, #63187), hydroxylamine (Sigma-Aldrich, #159417), N-ethylmaleimide (NEM) (Sigma-Aldrich, #04260), and TCEP (Sigma-Aldrich, #646547).
+ Open protocol
+ Expand
8

Quantitative Western Blot Analysis

Check if the same lab product or an alternative is used in the 5 most similar protocols
Cells were lysed in RIPA buffer (Thermo Fisher Scientific, Inc.), and the protein was extracted and quantified using a BCA Protein Assay kit (Pierce; Thermo Fisher Scientific, Inc.). Proteins (50 µg) were separated with 10% SDS-PAGE and transferred onto a polyvinylidene difluoride (PVDF) membrane (Thermo Fisher Scientific, Inc.). The membrane was incubated with TBS with Tween® 20 containing 5% non-fat milk at room temperature for 3 h, and then with rabbit anti-mouse SPRY2 (dilution, 1:50; cat no. ab85670), total-ERK (dilution, 1:100; cat no. ab196883), phospho-ERK (dilution, 1:100; cat no. ab214362) or GAPDH antibodies (dilution, 1:100; cat no. ab9485; all from Abcam, Cambridge, MA, USA) at room temperature for 3 h. Following washing with PBS with Tween 20 three times, the PVDF membrane was incubated with horseradish peroxidase-conjugated goat anti-rabbit secondary antibody (dilution, 1:10,000; cat no. ab6721; Abcam) at room temperature for 1 h. Chemiluminescence detection was performed using a Pierce™ Fast Western Blot kit (Pierce; Thermo Fisher Scientific, Inc.). The relative protein expression was analyzed using Image-Pro Plus software version 6.0 (Media Cybernetics, Inc., Rockville, MD, USA), represented as the density ratio vs. GAPDH.
+ Open protocol
+ Expand
9

Cellular Mechanisms of Metformin Action

Check if the same lab product or an alternative is used in the 5 most similar protocols
Collagenase IA and metformin were purchased from Sigma-Aldrich Ltd. (St Louis, MO, USA). Trypsin, Dulbecco's modified Eagle's medium/nutrient mixture F-12 (DMEM/F12; 1:1) medium, and charcoal-stripped foetal bovine serum (FBS) were purchased from Gibco (Billings, MT, USA). Rabbit anti-human IGFBP1, AMPK, phospho-AMPK, protein kinase B (AKT), phospho-AKT, extracellular regulated protein kinase (ERK), and phospho-ERK were purchased from Abcam (Cambridge, MA, USA). Rabbit anti-human β-actin and GAPDH primary antibodies and goat anti-rabbit horseradish peroxidase-conjugated secondary antibodies were purchased from Proteintech (Wuhan, China). Compound C (an AMPK inhibitor) was purchased from MedChemExpress (Shanghai, China).
+ Open protocol
+ Expand
10

Molecular Mechanisms of EMT Regulation

Check if the same lab product or an alternative is used in the 5 most similar protocols
Antibodies used in this study were anti-CBX1, E-Cadherin, N-Cadherin, Vimentin, Snail, pAKT, AKT, Twist, Slug, Zeb1, p65, phospho-p65, ERK, phospho-ERK, JNK, phospho-JNK, SMAD3, phospho-SMAD3, IGF-1R, IGF-1, EGFR, VEGFR1, FGFR1, KIT, PDGFR-α, TGFβ-R1, all sourced from Abcam; and MK-2206 (an AKT inhibitor), SC-79 (an AKT activator) from Selleck.
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!