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16 protocols using human hb

1

Evaluating Compounds in Hematology

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Normal and abnormal ZTOI were provided by the manufacturer. The standard compounds of β‐elemene, germacrone, curdione and furanodiene were purchased from Shanghai Yuanye Bio‐Technology Co., Ltd. Human Hb and dimethyl sulphoxide (DMSO) were purchased from Sigma‐Aldrich (St. Louis, MO, USA).
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2

Purifying Hemoglobin Complexes

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Hp 1-1, 2-2, and mixed type were purchased from Athens Research and Technology. Human Hb was acquired from Sigma-Aldrich. Individual Hp multimers from Hp 2-2 were purified by SEC. Hp 2-1 oligomers were purified from blood serum of a single donor. Additional chemicals and materials are described in SI Appendix, Supplementary Methods.
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3

Taxol-Loaded PEG Nanoparticles for Cancer Treatment

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Human Hb (99%) was obtained from Sigma-Aldrich (MO, USA). Carboxylate-functionalized PEG (COOH-PEG, MW 2000) was obtained from Sigma-Aldrich (MO, USA). PTX was obtained from Hongdoushan Co. Ltd. (Jiangsu, China). TaxolTM was obtained from Jiangsu Province Hospital (Nanjing, China). Human breast cancer cell line (MCF-7) was obtained from Shanghai Institute of Cell Biology (Shanghai, China). IR775 iodide was purchased from Sigma-Aldrich (St Louis, MO, USA). Trypsin, penicillin, streptomycin, fetal bovine serum (FBS), and RPMI-1640 medium were obtained from Hyclone (Waltham, USA). All other reagents were from Nanjing Wanqing Chemical Glassware Instrument (Nanjing, China).
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4

TLR2 and TLR9 Activation by metHb-LTA Complex

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HEK293 clones expressing human TLR2, TLR9 and S. aureus LTA (LTA-SA) were purchased from InvivoGen (San Diego, California, USA). Human Hb, blasticidin, and hygromycin were from Sigma-Aldrich (St. Louis, MO, USA). Buffy coat from healthy donors was obtained from the Blood Bank, National University Hospital, Singapore. Primary blood cells were incubated in 5% CO2 at 37 °C in HEPES-buffered RPMI 1640 containing 100 U/ml penicillin, 100 μg/ml streptomycin, and 2% FBS. HEK293 cells were cultured in DMEM supplemented with 10% FBS, 100 U/ml penicillin, and 100 μg/ml streptomycin. Adult Human Hb, which contains 96.5–98.5% HbA1 (α2β2 dimer) and 1.5–3.5% HbA2 (α2δ2 dimer), has been verified to be in the metHb state by spectrophotometric scanning between 500 and 700 nm (Du et al., 2010 (link)). As the endotoxin concentration in Hb was determined to be 2.86 EU/mg/ml by PyroGene Recombinant Factor C kit (Lonza Inc.), 1 mg/ml of Hb was pre-treated with 5 μg/ml of polymyxin B, which can scavenge 10 EU/ml of endotoxin. The metHb + LTA complex was pre-formed by co-incubating 1 mg/ml metHb with 10 μg/ml LTA for 30 min.
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5

Quantifying ADAMTS Proteases in Tissues

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Human Hb: Sigma Chemical Co. (St. Louis, MO, USA); anti-human ADAMTS-5 polyclonal antibody: CEDARLANE Co. (Burlington, Ontario, Canada); Anti-human ADAMTS-8 and -10 polyclonal antibodies: Biorbyt Ltd. (Cambridge, UK); anti-human ADAMTS-9 polyclonal antibody: Sigma; biotinylated link universal streptavidin-HRP secondary antibody and detection system: Dako Co. (Denmark); ELISA kit for ADAMTS-5, −9: Cloud-Clone Corp. (Katy, TX, USA).
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6

Thalassemia Screening Protocol

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Human Hb was bought from Sigma. HPLC-grade Methanol was bought from the Chinese Chemical Reagent Co., Ltd. (Shanghai, China). Water used in this work was Milli-Q water. Wooden tips (toothpicks) were purchased from the local supermarket (Nanchang, China). The length of the wooden tip was cut to ~2.0 cm in this study. All wooden tips were washed with methanol and water and were dried (100 °C) before use. A total of 319 whole blood samples from 319 women (person, their ages were from 21 to 41 and the average age was 28) were collected into EDTA-K2 tube (Shanghai Zhengbang Medical Treatment Technology Co., Ltd., Shanghai, China), including 100 α-thalassemia carriers, 67 β-thalassemia carriers, and 152 healthy samples (without any gene type of thalassemia carriers). All blood samples were collected from Jiangxi Maternal and Child Health Hospital (Nanchang, China). α/β-thalassemia blood samples were firstly confirmed by polymerase chain reaction (PCR) and flow-through hybridization technology analysis (Hybribio Limited, Chaozhou, China) to assign the types of thalassemia carriers; the identification methods followed our previous studies [2 (link),8 (link)].
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7

Native MS Analysis of Glycoproteins

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Extended experimental and method details can be found in SI Appendix. Human AGP (product number G9885), human Hp phenotype 1-1 (product number H0138), and human Hb (product number H7379) were purchased from Sigma-Aldrich. For native MS analysis, glycoproteins were dissolved in water, buffer exchanged to 200 mM ammonium acetate (pH 7.6), and analyzed on a modified Q-Exactive mass spectrometer (Thermo Fisher Scientific) (56 (link)) and a modified Q-Exactive Plus Orbitrap mass spectrometer (57 (link)). The raw native MS spectra were deconvoluted using UniDec software to produce zero-charge spectra. Protein and glycan mass calculations were based on amino acid and monosaccharide average residue masses. AGP–warfarin and Hp–Hb binding experiments were performed in ammonium acetate buffer (pH 7.6). Protein structures of AGP [Protein Data Bank (PDB) ID code 3KQ0] (17 (link)) and Hp–Hb complex (PDB ID code 4WJG) (43 (link)) were retrieved from PDB and processed using University of California, San Francisco Chimera program (version 1.22) (58 (link)).
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8

Quantification of Deuterated Estradiol

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E2-2, 4, 16, 16, 17-d5 ([2H5]-E2) was from C/D/N Isotope (Canada H9R 1H1). Acetone, acetonitrile, ethyl acetate, and methyl alcohol were obtained from TEDIA (Charlotte, NC288224, USA). E2, chloroform, N-Acetyl-L-Cysteine (NAC), L-Ascorbic acid (99%), trifluoroacetic acid anhydride (TFAA), methanesulfonic acid (MSA), human serum Alb, human Hb, and potassium nitrosodisulfonate were purchased from Sigma-Aldrich Inc. (St Louis, MO63178, USA).
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9

Chronic Hemoglobin Administration in Mice

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All experiments were approved by the local Animal Welfare Committee of the Radboudumc (Nijmegen, the Netherlands; DEC 2012-293) in accordance with the guidelines of the Principles of Laboratory Animal Care (NIH publication 86-23, revised 1985). Male C57Bl/6 N mice (Charles River) of 8–11 weeks of age were housed under controlled conditions with pulverized standard chow and water ad libitum and randomly assigned to a treatment group.
Human Hb (Sigma-Aldrich, the Netherlands) was dissolved in saline (20 mg/mL) and injected via the tail vein, 250 µL/mouse, weekly for 8 weeks. 24 h urine samples were collected at baseline or immediately after each Hb injection. Kidney tissue was collected in liquid nitrogen and stored at −80 °C or in 4% formalin O/N before imbedding in paraffin.
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10

Affinity Purification and Characterization of p-Benzoquinone Antibody

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Human Hb was purchased from Sigma (H7379) and used without further purification. p-Benzoquinone (p-BQ) was obtained from Himedia (RM-489) and freshly crystallized from n-hexane before use. All other reagents used were of analytical grade. Affinity purified polyclonal antibody to p-BQ raised in rabbit after immunization with p-BQ-bovine serum conjugate was supplied by Abexome Biosciences, Bangalore, India. LC/MS- grade solvents, acetonitrile and formic acid were purchased from Fluka. RapiGest™. Sodium iodide (NaI), polyethylene glycol (PEG) mix and Glu-fibrino peptide B (GFP) were obtained from Waters (Milford, MA, USA). Trypsin was purchased from Sigma–Aldrich (St. Louis, MO, USA). Ammonium bicarbonate and ammonium acetate were purchased from Merck (India). All other reagents used were of analytical grade.
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