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Identifier kit

Manufactured by Thermo Fisher Scientific
Sourced in Spain, United States

The Identifier Kit is a laboratory equipment product designed for identification and characterization purposes. It provides tools and reagents to assist in the identification and analysis of various samples or analytes. The core function of the Identifier Kit is to facilitate the identification process, without further interpretation or extrapolation on its intended use.

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4 protocols using identifier kit

1

Characterization of Thyroid Cell Lines

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The thyroid cell lines TPC1, Cal62, and 8505c were grown in Dulbecco’s modified Eagle’s medium (DMEM) supplemented with 10% fetal bovine serum (FBS). The sources of the cell lines have been described [57 (link)]. PCCl3-BRAF and PCCl3-HRAS were derived from PCCl3 rat thyroid follicular cells [58 (link)], to obtain doxycycline-inducible expression of BRAFV600E or HRASV12 [57 (link), 59 (link), 60 (link)]. All cell lines used in this work were tested for mycoplasma contamination and authenticated every 6 months by short tandem repeat profiles using the Applied Biosystems Identifier kit in the Genomic Facility at the Institute of Biomedical Research (IIBm; Madrid, Spain).
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2

Overexpressing IL-6 in HNSCC Cell Line

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The human HNSCC cell line CAL27 was purchased from the ATCC (Manassas, VA, USA). CAL27 is a naturally IL-6 low expressing cell line. IL-6 was overexpressed in CAL27 cells by using a retroviral vector as described previously [18 ]. UM-SCC-74A, a naturally IL-6 high expressing cell line, was obtained from Dr. Thomas E. Carey (University of Michigan). All tumor cell lines were cultured in DMEM supplemented with 10% fetal bovine serum, non-essential amino acids and penicillin/streptomycin. The identity of all cell lines was confirmed by STR genotyping (Identifier Kit, Applied Biosystems, Carlsband, CA). Bazedoxifene acetate was purchased from (Cayman Chemicals, Ann Arbor, MI) and cisplatin (CDDP) was purchased from Sigma-Aldrich (St. Louis, MO). Antibodies against pSTAT3, pERK1/2, pAkt, Survivin and XRCC-1 were obtained from Cell Signaling Technology (Danvers, MA). Nanog antibody for Western blotting was purchased from Novus Biologicals (Littleton, CO) and for immunohistochemistry was obtained from Abcam (Cambridge, CA). ERCC-1 antibody was purchased from Santa Cruz (Dallas, TX) and pFAK was from Invitrogen (Carlsband, CA). GAPDH antibody was obtained from EMD Millipore (Billerica, MA).
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3

NSCLC Cell Line Characterization

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Human NSCLC cell lines H2122, H2030, and H1299 were obtained from the American Type Culture Collection (ATCC) and maintained in RPMI 1640 medium (Thermo Fisher Scientific), with 10% FBS (GE Healthcare, Chicago, IL) and 1% penicillin/streptomycin (Life Technologies, Carlsbad, CA). Cells were cultured in 37°C with 5% CO2. Typically, cells were kept in culture for a minimum of two passages prior to and a maximum of 20 passages during experiments. The identity of all cell lines was confirmed by STR genotyping (Identifier Kit, Applied Biosystems, Carlsbad, CA). For the detection of mycoplasma in cell culture, the Universal Mycoplasma Detection Kit (ATCC) was used. Cisplatin (Sigma, St. Louis, MO) was dissolved in dimethyl formamide (Sigma). Anti-KRAS antibody was purchased from Santa Cruz Biotechnology (Dallas, TX); anti-p-MEK-1/2, p-ERK-1/2, EGFR, and GAPDH primary antibodies were purchased from Cell Signaling Technology (Danvers, MA). Anti-rabbit and anti-mouse secondary antibodies were purchased from Li-Cor Bioscience (Lincoln, NE).
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4

Validation of Human Thyroid Cancer Cell Lines

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All cell lines listed in Table S1 are of human thyroid cancer origin, grown in their recommended media, and maintained at 37 °C in 5% CO2. All cell lines were validated using short tandem repeat (STR) profiling using the Applied Biosystems Identifier Kit (#4322288, Waltham, MA, USA) or GlobalFiler PCR Amplification Kit (#4476135, Warrington, UK) in the Barbara Davis Center BioResources Core Facility, Molecular Biology Unit, at the University of Colorado. Cells were tested for Mycoplasma contamination using the Lonza Mycoalert system. Cell lines were passed no more than 30 times after thawing.
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