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7 protocols using ab150133

1

Quantitative Western Blot Analysis of IGF1R

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Total protein was extracted from C8-D1 astrocytes. Cell lysates were subjected to 10% to 15% sodium dodecyl sulfate-polyacrylamide gel electrophoresis and the separated proteins were transferred to a nitrocellulose membrane (Millipore Sigma), blocked with 5% skimmed milk powder in 0.1% Tween 20 (Ding Guo, Bejing, China) in Tris buffer solution for 1 hour at room temperature, and incubated overnight at 4°C with the following antibodies: rabbit monoclonal IGF1R antibody (1:1000, ab182408; Abcam) and mouse monoclonal β-actin antibody (1:2000, sc81178; Santa Cruz Biotechnology, Santa Cruz, CA, USA), followed by incubation with a horseradish peroxidase-conjugated antibody (goat anti-rabbit IgG, 1:2000, ab150077; Abcam; goat anti-mouse IgG, 1:2000, ab150133; Abcam). Immunoreactive bands were visualized using a chemiluminescence kit (Millipore Sigma). The integrated density value for each band was calculated using a computer-aided image analysis system (Fluor Chen 2.0; Bio-Rad, Hercules, CA, USA).
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2

Multicolor Immunofluorescence Staining of Mouse Tissues

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Manual immunofluorescent (IF) staining was done on mouse brain and skin slides blocked for one hour at room temperature (RT) in a humidity chamber with 5% mouse serum, 5% donkey serum, and 0.3% Triton X-100. Primary antibody solutions were prepared in PBS with 0.3% Triton X-100. Primary antibodies used were specific to F4/80 (Novus Biologicals, #NB800-404), Iba1 (Novus Biologicals, #NB100-1028), and DGKα (Bioss Antibodies, #BS-14294R). Tissue was incubated overnight at 4°C in humidity chamber. Fluorescent antibodies (Abcam) used were donkey anti-rat AF647 (#ab150155), donkey anti-rat AF488 (#ab150153), donkey anti-rabbit AF647 (#ab150075), and donkey anti-goat AF488 (#ab150133). Secondary solutions were prepared in PBS with 0.3% Triton X-100 and incubated on slides for three hours at RT in humidity chamber protected from light. Stained slides were mounted using mounting medium with DAPI (Abcam, #ab104139). Slides were imaged using the Leica Thunder Imager at 10x magnification, and analyzed on the Leica Application Suite X (LAS X) software platform.
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3

Ki67 and Nestin Double Staining Protocol

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In the Ki67 and Nestin staining stage, sections were incubated with a rabbit anti-Ki67 antibody (1:200, 9129, CST) and mouse anti-Nestin (1:200, ab6142, Abcam) at 4°C overnight. After washing in TBS with 0.01% Tween-20, the sections were incubated with AlexaFluor® 488 goat anti-mouse IgG (1:500, ab150133, Abcam) and AlexaFluor® 594 goat anti-rabbit IgG (1:500, ab150080, Abcam) at 37°C for 2 h. The other steps and parameters were consistent with the aforementioned staining except for HCL treatment and borate buffer neutralization similar to BrdU/DCX labeling. The number of Ki67/Nestin double-positive cells was recorded.
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4

HMGR1S Antibody Production and Characterization

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The catalytic domain of Arabidopsis HMGR1S (CD1) produced in Escherichia coli was used as immunogen to produce a polyclonal antibody in rabbit and the resulting serum was immunosubstracted to remove IgG reacting against the bacterial proteins [48 (link)]. The immunopurified serum (Ab-CD1-i) was used as primary antibody at 1:500 for whole mount and 1:1000 for transmission EM. Anti-rabbit IgG secondary antibodies for HMGR detection were code Ab150066 (Abcam, Toronto, ON, Canada) coupled to Alexa Fluor-555 at 1:1000 for whole mount (Figure 1a,b), code Ab150068 (Abcam, Toronto, ON, Canada) coupled to Alexa Fluor-594 at 1:1000 for whole mount (Figure 1g), code 111-215-144 (Jackson Immunoresearch, Cambridge, UK) coupled to an 18-nm gold particle at 1:30 for transmission EM (Figure 1d) and code 111-205-144 (Jackson Immunoresearch, Cambridge, UK) coupled to a 12-nm gold particle at 1:30 for transmission EM (Figure 1e,f,l,m).
GFP was detected with Ab-5450 (Abcam, Toronto, ON, Canada) as the primary antibody at 1:1000 for whole mount and transmission EM. Anti-goat IgG secondary antibodies for GFP detection were code Ab150133 (Abcam, Toronto, ON, Canada) coupled to Alexa Fluor-488 at 1:1000 for whole mount, and code 705-215-147 (Jackson Immunoresearch, Cambridge, UK) coupled with an 18-nm gold particle at 1:15 for transmission EM.
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5

Immunohistochemical Analysis of 5-HT and SP in Shrews

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Shrews (n = 5–6 shrews per group) were treated with either vehicle or yohimbine (1 mg/kg, i.p.) and rapidly anesthetized with isoflurane and subjected to perfusion at 15 min and 30 min post-treatment to examine 5-HT and SP immunoreactivity. The experimental procedure prior to staining was performed as described above for Section 4.4.1. c-fos Staining and Image Analysis. Coronal brainstem sections (20 μm) were blocked with 0.1 M PBS containing 10% donkey serum and 0.3% Triton X-100, then incubated overnight at 4 °C with a mix of goat anti-5-HT primary antibody (1:1000, ab66047, Abcam) and rat anti-SP primary antibody (1:400, MAB356, EMD Millipore, Burlington, VT, USA) in 0.1 M PBS containing 5% donkey serum and 0.3% Triton X-100. Sections were washed 3 times (10 min each) in PBS and incubated in a mix of Alexa Fluor 488 donkey anti-goat (1:500, ab150133, Abcam) and cy3-conjugated donkey anti-rat (1:500, AP189C, EMD Millipore) secondary antibody in 0.1 M PBS containing 0.3% Triton X-100 for 2 h at room temperature. After washing with PBS 3 times (10 min each), sections were mounted with anti-fade mounting medium containing DAPI (Vector Laboratories). Images for the DVC were acquired using a confocal microscope (Zeiss LMS 880) as described above. Fluorescence intensity (mean gray value) of 5-HT and SP values were acquired using ImageJ software, as described previously [45 (link)].
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6

Western Blot Analysis of LC3B and p62

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LC3B and p62 protein expression levels were measured by western blotting. Hippocampal and prefrontal cortex tissues (n = 5) of rats were washed, homogenized, and lysed in RIPA buffer (MA0151, Meilunbio) containing protease inhibitors. After routine protein extraction from brain tissues, the total protein concentration was determined, and then 30 μg of total protein was mixed with 1/4 volume of 5× SDS‐PAGE sample buffer (P0015, Beyotime Biotechnology). The protein samples were boiled for 10 min, and the proteins were separated by SDS‐PAGE. After transferring the separated proteins onto PVDF membranes (IPVH 00010, Millipore), the membranes were incubated with primary antibodies, such as LC3B (1:1000, ab192890, Abcam), p62 (1:1000, 23214S, CST), and GAPDH (1:5000, 97166, CST), at 4°C overnight. Subsequently, secondary antibodies (1:5000, ab150133, Abcam) were incubated at 37°C for 2 h. The absorbance values of the protein bands were scanned using an Odyssey infrared gel imaging system (Affinity, USA). Quantitative analysis was performed using ImageJ software (version 1.45 J; National Institutes of Health, Bethesda, MD, USA).
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7

Quantifying Extracellular Matrix in MSC-Seeded Scaffolds

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After 1, 7, 21 and 28 days of cultivation, MSC-seeded scaffolds were harvested, carefully washed with PBS and individually digested in 1 ml papain digestive solution (280 µg/ml papain, 50 mM EDTA, 5 mM L-cysteine in Dulbecco's PBS pH 6.5, all from Sigma-Aldrich) at 65 o C overnight. Digested samples were centrifuged and the supernatants were assayed for the cell numbers by total DNA quantification using a Quant-iT TM Picogreen® kit (Invitrogen). Sulfated glycosaminoglycan (sGAG) content was measured using 1,9-dimethymethylene blue (DMMB, Sigma-Aldrich). Collagen content was measured using the acid hydrolysed papain digestion solution and a hydroxyproline assay kit (Sigma-Aldrich).
The total collagen content was quantified from the hydroxyproline content as described previously [34] . All samples and standards were done in triplicate. Cell-free scaffolds and ovine cartilage harvested from femoral condyles of sheep were used as controls. Immunostaining of type II collagen was performed using primary antibody (Abcam, ab185430) and secondary antibody labelled with Alexa Fluor 488 (Abcam, ab150133). The sections were counterstained with Hoechst 33258 (Sigma-Aldrich) for nuclei staining and imaged using a Leica TCS LSI confocal microscope.
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