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Cytomix

Manufactured by Merck Group
Sourced in Italy

Cytomix is a versatile laboratory instrument designed for cell mixing and sample preparation. It offers precise control over mixing speed, duration, and temperature to ensure thorough and consistent sample homogenization. The core function of Cytomix is to facilitate the efficient mixing of cells, reagents, and other biological samples, enabling researchers to obtain reliable and reproducible results in their experiments.

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4 protocols using cytomix

1

Transfection of P. falciparum with pfhsp70-1-mCherry

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pfhsp70-1-mCherry was subcloned into a P. falciparum expression vector, pfYC103 as previously reported (Wagner et al., 2013 (link)). The plasmid was purified using a Qiagen Maxi kit and resuspended in CytoMix (25 mM HEPES, pH 7.6, 2 mM EGTA (Sigma), 5 mM MgCl2 (Fisher Scientific), 8.66 mM K2HPO4 (Fisher Scientific), 1.34 mM KH2PO4 (VWR International), 120 mM KCl (Fisher Scientific), 0.15 mM CaCl2 (Sigma)) (Rug and Maier, 2013 (link); Crabb et al., 2004 (link)). For transfection of P. falciparum 3D7, 100 μL ring-stage parasites (14–18 hpi) at 5% parasitemia was resuspended in 300 μL CytoMix containing 75 μg plasmid DNA in a 0.2 cm electroporation cuvette (Bio-Rad). Electroporation was performed at 0.31 kV and 950 μF with maximal capacitance using a Gene Pulser II system (Bio-Rad). The parasites were then cultured in complete medium at 1% hematocrit at 37°C. Selection of transfectants with 200 nM pyrimethamine (Sigma) started at 3 days post-transfection. PfHsp70-1-mCherry expression in transfected parasites was verified by fluorescence microscopy.
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2

Wound Healing Assay by Scratch Test

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Wound Healing Assay was assessed by scratch test as previously described (19 (link)). HT29 cells were cultured in 6-well plated at a density of 2 × 105 cells/ml until confluence reached 90%. A straight-line wound was made using a 10-ul pipette tip. Cell debris and smoothed the edge of the straight-line wound were removed by a wash with PBS and cells were then maintained in a medium with a reduced percentage of FBS (1%). Then cells were exposed to cytomix [TNFα (100 ng/ml) and INFγ (250 ng/ml), Peprotech, Rocky Hill, USA] or to B-box (10 μg/ml) (HMGBiotech, Milan, Italy) in presence or absence of DPG (300 μM) or anti-HMGB1 antibody (Sigma) for 48 h. In a second set of experiments, cells were treated with cytomix for 24 h and then were exposed to DPG (300 μM, Sigma), anti-VTN (1:1,000) and anti-PLAUR (1:1,000), alone or in combination, for 24 h. In both case, cells migrated into the wounded area were visualized at 0, 6, 24, and 48 h by Hematoxylin and Eosin staining. Images of each condition were acquired at a magnification of 10X. Cellular density related to a fixed wounded area (1 mm2) was measured after 48 h using ImageJ software (available in the public domain at www.nih.gov; National Institutes of Health [NIH], Bethesda, MD, USA) (10 acquisition for each experimental point). The experiment was replicated three times.
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3

Selecting Concanavalin A-Resistant Parasites

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PF 29-13 were grown in SDM-79 as described [13] (link), [14] (link). To select for parasites that were spontaneously resistant to conA binding, lyophilized conA (Sigma, St. Louis, MO) was hydrated in cytomix [15] (link) supplemented with 1 mM MnCl2 (cytoM) and incubated at a final concentration of 2 μg/mL overnight with PF parasites. Agglutinated parasites were removed by slow speed centrifugation (40g, 10 min) and survivors allowed to recover 24 h. This process was repeated three times, and then the concentration of conA increased to 5 μg/mL and then 10 μg/mL. Survivors were cloned by dilution and characterized.
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4

Macrophage Transfection and Activation Assay

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RAW 264.7 macrophage cells (American Type Culture Collection, Manassas, VA) were cultured in Gibco Dulbecco’s modified Eagle’s medium with 10% fetal bovine serum and 1% penicillin-streptomycin (Life Technologies). Cells were transfected with 20 nM miRIDIAN miR mimic for mmu-miR-342-3p or with a miR mimic transfection control, cel-miR-67 (Dharmacon, GE Lifesciences, Lafayette, CO) by AMAXA electroporation utilizing Nucleofector Kit V (Lonza Group, Basel, Switzerland), per manufacturer’s instructions. After 48 hours, cells were harvested for protein or RNA studies, and pellets were snap frozen. Protein levels were determined by BCA assay, and protein was equivalently loaded for gel electrophoresis and Western blot analysis of GSNOR:β-actin, as described above. RAW 264.7 qRT-PCR for miR-342-3p was similarly performed on transfected cells, as described above, to confirm increased gene expression resulting from transfection. Additionally, untransfected RAW 264.7 cells in culture media were incubated with cytomix (10 ng/mL each interleukin-1β, tumor necrosis factor-α, interferon-γ, and lipopolysaccharide; Sigma-Aldrich) or vehicle for 10 hours to measure changes in GSNOR expression in the activated macrophage (Tan et al., 2013 (link)).
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