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Class b cpg oligonucleotide

Manufactured by InvivoGen

Class B CpG oligonucleotide is a synthetic DNA sequence that contains unmethylated CpG motifs. It is designed to activate the Toll-like receptor 9 (TLR9) pathway, which plays a role in the innate immune response.

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3 protocols using class b cpg oligonucleotide

1

EBV-Transformed B Cell Expansion and ER Stress

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Exponentially growing B95-8 cells were seeded at 1×106 cells/mL and incubated for 3d at 37°C, 5% CO2. B95-8 supernatant was harvested by centrifugation at 300×g and 4°C and passed through a 0.45µm filter. PBMCs were suspended at 1–5×106 cells/ml in RPMI-1640 media with 20% FBS followed by an addition of 0.5–1 volumes of B95-8 supernatant with or without 10µg of a human TLR9 ligand (ODN 2006, Class B CpG oligonucleotide, Invivogen). Cells were incubated overnight at 37°C in the presence of 5% CO2 and 0.5µg/ml Cyclosporine A, and an equal volume of media was added the next day. Cells were cultured until they formed macroscopically visible clusters and then maintained at concentrations of 0.5–1×106 cells/ml. For ER stress induction, EBV-transformed cells were seeded at 1×106 cells/ml and incubated with 100nM thapsigargin (Sigma) for six hours. Cells were harvested, washed in PBS and processed for RNA isolation as described below.
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2

B Cell Proliferation Assay

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B cells were negatively selected using EasySep™Human B Cell Enrichment Kit (Stem cell technologies) and labeled with CFSE (final working solution 1μM) using the CellTrace™ CFSE Cell Proliferation Kit (Life Technologies). Primary B cells were stimulated with 10ug/ml anti-IgM mix (AffiniPure Goat Anti-Human IgA+IgG+IgM (H+L), Jackson Immunoresearch Lab) + 1μg/ml recombinant human Soluble CD-40 Ligand (CD40L, ProSpec) + 1μg/ml Class B CpG oligonucleotide (Invivogen) for 5 days. Data was analyzed for proliferation index with FlowJo (Version 9).
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3

Dendritic Cell CpG Signaling Pathway

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Ndst1 silenced and non-silenced DC2.4 cells were incubated in serum free RPMI-1640 for 1 h, and then treated with 1 μM Class B CpG oligonucleotide (InvivoGen) in serum free RPMI-1640 at 37 °C for the specified time course. In some studies, NFκB phosphorylation was examined by western (described separately) following CpG stimulation, while expression of IFN-β was examined by qPCR (described separately) in other studies. Primary DCs harvested from whole bone marrow from either Ndst1f/f CD11cCre + mutant or Ndst1f/f CD11cCre− control mice were used in separate studies examining ELISA based IFN-β protein produced in the culture medium in response to either the TLR9 ligand CpG or to the TLR7 ligand R848, described separately.
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