The largest database of trusted experimental protocols

3 protocols using s6508

1

Isolation and Analysis of Mouse Ileal Epithelial Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
Mouse ileal epithelial cells were collected by scraping from mouse ileum as previously described.65 (link) Briefly, mouse epithelial cells were lysed in lysis buffer (1% Triton X-100 (Sigma-Aldrich, X100), 150 mM NaCl ( J.T.Baker 3624-19), 10 mM Tris ( Fisher Scientific, BP152-5) pH 7.4, 1 mM EDTA(Fisher Scientific, BP120-1), 1 mM EGTA(Sigma-Aldrich, E3889) pH 8.0, 0.2 mM sodium ortho-vanadate (Sigma-Aldrich, S6508), and protease inhibitor cocktail (Roche Diagnostics, 118367001)). Cultured cells were rinsed twice in ice-cold HBSS (Sigma-Aldrich, H1387), lysed in protein loading buffer (50 mM Tris, pH 6.8, 100 mM dithiothreitol (Amresco, 0281), 2% SDS (Sigma-Aldrich, L3771), 0.1% bromophenol blue (IBI Scientific, IB74040), and 10% glycerol (Sigma-Aldrich, G5516)), and sonicated (Branson Sonifier, 250). Equal amount of protein was separated by SDS-polyacrylamide gel electrophoresis, transferred to nitrocellulose (Bio-rad, 162-0112), and immunoblotted with primary antibodies: VDR (Santa Cruz, sc13133), Beclin-1(Santa Cruz, sc10086), Villin (Santa Cruz, sc7672), LC3B (Cell Signal Technology Inc., 2775), ATG16L1 (Abgent, AP18176), p62 (Abgent, AP2183B) or β-actin (Sigma-Aldrich,A1978) antibodies and visualized by ECL chemiluminescence (Thermo Scientific, 32106).
+ Open protocol
+ Expand
2

Mouse Intestinal Mucosal Cell Isolation and Analysis

Check if the same lab product or an alternative is used in the 5 most similar protocols
Mouse intestinal mucosal cells were collected by scraping from mouse colon,
including proximal and distal colon, as previously described. 10 Briefly, mouse mucosal cells were lysed in lysis buffer
(1% Triton X-100 (Sigma-Aldrich, X100), 150 mM NaCl (J.T. Baker 3624-19), 10 mM
Tris (Fisher Scientific, BP152-5) pH 7.4, 1 mM EDTA (Fisher Scientific, BP120-1), 1 mM
EGTA (Sigma-Aldrich, E3889) pH 8.0, 0.2 mM sodium ortho-vanadate (Sigma-Aldrich, S6508)
and protease inhibitor cocktail (Roche Diagnostics, 118367001). Cultured cells were rinsed
twice in ice-cold Hanks’ balanced salt solution (Sigma-Aldrich, H1387), lysed in
protein loading buffer (50 mM Tris, pH 6.8, 100 mM dithiothreitol (Amresco, 0281),
2% SDS (Sigma-Aldrich, L3771), 0.1% bromophenol blue (IBI Scientific,
IB74040) and 10% glycerol (Sigma-Aldrich, G5516)) and sonicated (Branson Sonifier,
250). Equal amount of protein was separated by SDS-polyacrylamide gel electrophoresis,
transferred to nitrocellulose (Bio-rad, 162-0112) and immunoblotted with primary
antibodies: Villin (Santa Cruz, sc7672), ZO-1 (Invitrogen, 33–9100) or
β-actin (Sigma-Aldrich, A1978) antibodies and visualized by ECL chemiluminescence
(Thermo Scientific, 32106). Membranes probed with more than one antibody were stripped
before re-probing. Western blot bands were quantified using Image Lab 4.01 (Bio-Rad).
+ Open protocol
+ Expand
3

Isolation and Analysis of Mouse Intestinal Mucosal Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
Mouse intestinal mucosal cells were collected by scraping from mouse colon, including proximal and distal colon, as previously described.28 (link) Briefly, mouse mucosal cells were lysed in lysis buffer (1% Triton X-100 (Sigma-Aldrich, X100), 150 mM NaCl (J.T. Baker 3624–19), 10 mM Tris (Fisher Scientific, BP152-5) pH 7.4, 1 mM EDTA (Fisher Scientific, BP120-1), 1 mM EGTA (Sigma-Aldrich, E3889) pH 8.0, 0.2 mM sodium ortho-vanadate (Sigma-Aldrich, S6508) and protease inhibitor cocktail (Roche Diagnostics, 118,367,001). Cultured cells were rinsed twice in ice-cold Hanks’ balanced salt solution (Sigma-Aldrich, H1387), lysed in protein loading buffer (50 mM Tris, pH 6.8, 100 mM dithiothreitol (Amresco, 0281), 2% SDS (Sigma-Aldrich, L3771), 0.1% bromophenol blue (IBI Scientific, IB74040) and 10% glycerol (Sigma-Aldrich, G5516)) and sonicated (Branson Sonifier, 250). Equal amount of protein was separated by SDS-polyacrylamide gel electrophoresis, transferred to nitrocellulose (Bio-rad, 162–0112) and immunoblotted with primary antibodies: anti-GFAP (Abcam, ab53554), SMMHC (Abcam, ab53219), human SOD-158 or β-actin (Sigma-Aldrich, A1978) antibodies and visualized by ECL chemiluminescence (Thermo Scientific, 32,106). Membranes probed with more than one antibody were stripped before re-probing. Western blot bands were quantified using Image Lab 4.01 (Bio-Rad).
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!