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7 protocols using arginase 1

1

Protein Expression Profiling of Vascular Cells

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Aliquots of protein extracts (20 μg) derived from THP1 monocytes, their derived macrophages, HUVECs, and HASMCs were separated by 10% sodium dodecyl sulfate polyacrylamide gel electrophoresis, and then immunoblotted with specific antibodies raised against the following proteins: CD68, ACAT1, ICAM1, VCAM1 (Santa Cruz Biotechnology, Santa Cruz, CA, USA), ABCA1, collagen 1 (Novus Biologicals, Littleton, CO, USA), collagen 3, fibronectin, arginase 1, phospho (Ser529)-NFκB, α-tubulin, MMP2 (GeneTex, Irvine, CA, USA), MMP9 (EnoGene, Atlanta, GA, USA), elastin, MARCO, selectin E (Bioss, Woburn, MA, USA), PPARγ (Signalway Antibody, College Park, MD, USA), phospho (Thr202/Tyr204)-ERK1/2, phospho (Ser/Thr)-Akt (Cell Signaling Technology, Tokyo, Japan), c-Src (Bioworld Technology, St. Louis Park, MN, USA), PI3K, Bcl2, Bax, and β-actin (Sigma). The band intensity of the immunoblot was quantified by densitometry [39 (link),40 (link),41 (link),44 (link),45 (link),46 (link),47 (link),48 (link),49 (link)].
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2

Macrophage Isolation and Immunoblotting

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Peritoneal cells were immediately suspended in RPMI-1640 medium supplemented with 10% FBS, 0.05 mg/ml streptomycin, and 50 U/ml penicillin, and were seeded onto 6-cm dishes (4 × 106 cells per 2 ml/dish). After incubation for 1 h at 37°C in 5% CO2 to allow adhesion, the medium was discarded to remove nonadherent cells. Adherent macrophages were immediately harvested after washing the dishes with PBS twice for immunoblotting with antibodies to pentraxin-3, MARCO (Bioss), arginase-1, MCP-1, JNK (GeneTex), COX-2 (Cayman Chemical, Ann Arbor, Michigan), NF-κB (Aviva Systems Biology), phosphorylated ERK1/2 (Cell Signaling Technology), or β-actin (Sigma) 19 (link), 22 (link).
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3

Immunohistochemical Analysis of Neuroinflammation

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Primary antibodies were used against Iba-1 (mouse monoclonal IgG, 1:500 (Millipore) or rabbit polyclonal IgG, 1:1000 (Wako)), inducible nitric oxide synthase (iNOS) (rabbit polyclonal IgG, 1:200 (Abcam)), CD68 (mouse monoclonal IgG, 1:500 (Bio-Rad)), Arginase-1 (rabbit polyclonal IgG, 1:2000 (Gene Tex)), CD206 (goat polyclonal IgG, 1:400 (R &D systems)), Ki-67 (rabbit polyclonal IgG, 1:2000 (Novocas)), and GFAP (mouse monoclonal IgG, 1:10000 (Millipore)). For detection of the primary antibodies, Alexa488 or Alexa594-conjugated secondary antibodies (anti-rabbit or mouse IgG, 1:2000 (Thermo Fisher)) were used. Vessel walls were visualized by Alexa594-conjugated phalloidin (1:500, (Thermo Fisher)).
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4

Immunoprecipitation of PP2A and Arginase-1

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Immunoprecipitation experiments were performed using SureBeads™ Protein A/G Magnetic Beads (BioRad SureBeads™ Protein G #161-4023). Briefly, 100 μl SureBeads were magnetized and washed with a solution of PBS/Tween20 0.1% v/v., then incubated for 30 min with 2 μg anti- PP2A (Genetex # GTX106334, Irvine, CA, USA) and Arginase-1 (Genetex # GTX109242, Irvine, CA, USA) at room temperature. After incubation, beads were washed 3 times with PBS/Tween20 0.1% v/v and the beads/antibody complexes were recovered and incubated with 100 μg of protein extracts for 1 h at room temperature. Proteins were separated by SDS-PAGE followed by immunoblotting on a nitrocellulose membrane (Bio-Rad, Hercules CA, USA). Membrane were incubated with the antibodies anti-HNE (1:2000, Novus Biologicals, Abingdon, UK), and then detected by the peroxidase-conjugated secondary antibody (1:20.000, Bio-Rad, Hercules, CA, USA) with Clarity™ Western ECL Blotting Substrates (Bio-Rad, Hercules, CA, US). Membranes were then acquired with ChemiDoc MP image system (Bio-Rad, Hercules, CA, USA) and analyzed using Image Lab software (Bio-Rad, Hercules, CA, USA).
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5

Protein Expression Analysis in Vascular Cells

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Aliquots of protein extracts derived from THP-1 monocytes, THP-1-derived macrophages, HASMCs, and HUVECs were separated with 10% sodium dodecyl sulfate-polyacrylamide gel electrophoresis and then immunoblotted with antibodies raised against the following proteins: CD36, CD68, ACAT-1, ICAM-1, VCAM-1 (Santa Cruz Biotechnology, Santa Cruz, CA, USA), ABCA1, phosphorylated nuclear factor-κB (p-NF-κB), phosphorylated c-jun N-terminal kinase (p-JNK), α-tubulin, arginase-1 (GeneTex, Irvine, CA, USA), E-selectin, MARCO (Bioss, Woburn, MA, USA), peroxisome proliferator-activated receptor-γ (PPAR-γ; Signalway Antibody, College Park, MD, USA), phosphorylated Akt, phosphorylated extracellular signal-regulated kinase 1/2 (p-ERK1/2), phosphorylated p38 (p-p38), Bax (Cell Signaling Technology, Danvers, MA, USA), Bcl-2 (Abcam, Cambridge, UK), cleaved caspase-3 (R&D Systems, Minneapolis, MN, USA), glyceraldehyde-3-phosphate dehydrogenase (GAPDH; Acris-OriGene Technologies, Herford, Germany), and β-actin (Sigma, St. Louis, MO, USA) [2 (link), 29 (link)–40 (link)]. Proteins were visualized by enhanced chemiluminescence western blotting detection reagents (GE Healthcare, Amersham, UK).
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6

Retinal Protein Expression Analysis

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Retinas were collected, snap-frozen, and stored at −80 oC until analysis. Frozen retinas or cells were homogenized in RIPA buffer (Thermofisher Scientific). Western blotting was conducted as previously described [2 (link)]. The primary antibodies used were IL-1β (R&D Systems, Cat. # AF-401-NA), Iba-1 (FUJIFILM Wako, Cat. # 019-19741), p-NF-κB (Cell Signaling, Cat. # 3033), T-NF-κB (Cell Signaling, Cat. # 4764), TNF-α (Abcam, Cat. # ab1793), HDAC1 (Cell signaling, Cat. # 5356), HDAC2 (Cell Signaling, Cat. # 5113), HDAC3 (BD Biosciences, Cat. # 611124), arginase 1 (GeneTex; Cat. # GTX109242), arginase 2 (Santa Cruz Biotechnology, Cat. # Sc-20151), tubulin (Sigma, Cat. # T9026), and β-actin (Sigma, Cat. # A1978-200UL). Secondary antibodies (GE Healthcare) were diluted 1:2000 in 5% milk.
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7

Flow Cytometry Analysis of Liver Immune Cells

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Liver mononucleated cells were isolated from the livers of naive and MCD-fed mice and purified on a density gradient (Lympholyte®-M, Cedarlane Laboratories Ltd. Burlington, Canada) as described in Crispe (1997) . Cells were then washed with Hank's medium and incubated 30 min with de-complemented mouse serum to block unspecific immunoglobulin binding. The cells were then stained with fluorochrome-conjugated antibodies for CD45, CD11b, Ly6C, MHCII, (eBiosciences, San Diego, CA, USA), F4/80 (Invitrogen, Abingdon, UK) and analyzed with a FACScalibur (Becton Dickinson, Franklin Lakes, NJ, USA) flow cytometer. Intracellular staining for TNF-α, IL-12 and IL-10 was performed using specific fluorochrome-conjugated antibodies supplied by (eBiosciences, San Diego, CA, USA). AnxA1-and arginase-1-producing cells were detected using polyclonal rabbit antisera against, respectively AnxA1 (Millipore, Temecula, CA, USA) and arginase-1 (Genetex, San Antonio, TX, USA) in combination with phycoerythrin-conjugated antirabbit IgG (Sigma-Aldrich, Milan, Italy).
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