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762 protocols using tunicamycin

1

Tunicamycin Sensitivity Assay in C. elegans

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Sensitivity to tunicamycin was assayed by placing at least 100 starvation-synchronized L1 animals on NGM plates containing 5 μg/ml tunicamycin (Sigma), made using 10 mg/ml tunicamycin stock in DMSO and seeded with E. coli OP50 bacteria. Survival to the L4 larval stage or later was determined after three days.
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2

Investigating Endoplasmic Reticulum Stress in HepG2 Cells

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Human hepatoma (HepG2) cells (ATCC, Mannasas, VA) were cultured in Dulbecco's modified Eagle medium (DMEM) with 10% fetal bovine serum and maintained at 37°C in 5% CO2. Cells were grown to 80% confluence in 6-well plates and treated with 12 μmol/L tunicamycin, 100 nmol/L thapsigargin (Sigma-Aldrich, St. Louis, MO), 5 mmol/L DL-homocysteine (Sigma-Aldrich), or vehicle (DMSO/saline) in serum-free DMEM for 6 hours. To determine whether the effects of tunicamycin are dependent on c-Jun-N-terminal kinase (JNK) or extracellular signaling-regulated kinase (ERK), HepG2 cells were treated with the JNK inhibitor SP600125 (Sigma-Aldrich) at a concentration of 25 μmol/L or the MAPK/ERK kinase inhibitor PD184352 (Santa Cruz Biotechnology, Dallas, TX) at 1 μmol/L or vehicle (DMSO/saline) as previously described.26 (link) One hour after exposure to SP600125 or PD184352, cells were treated with tunicamycin (12 μmol/L; Sigma-Aldrich) in serum-free DMEM and incubated for an additional 6 hours. Successful inhibition of JNK and ERK activation was confirmed by Western blot analysis as previously described.26 (link)
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3

Investigating Cellular Stress Responses

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Mice either received an intraperitoneal injection of PBS (10 mL/kg, control group) or tunicamycin (Sigma-Aldrich; 2 mg/kg) or two injections of rapamycin (LC laboratories; 5 mg/kg at day1 and day 2) or tunicamycin + rapamycin, or tunicamycin + salubrinal (Sigma-Aldrich; 1.5 mg/kg). Mice were sacrificed 24 h to 48 h post-injection.
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4

Tunicamycin-Induced ER Stress Assay

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4T1 shSCR and shPHGDH#2 cells were treated for 72 h with 0.05 ug/ml tunicamycin (Merk Life Science, T7765). tunicamycin was washed out and the cells still attached to the flask were harvested and seeded – at 1×105, 8×104, 4×104 per well for the 3 time points – on 10 mm round glass coverslip previously coated with fibronectin bovine plasma (1:1 in PBS) (Merk Life Science, F1141) and placed in 12-wells plates. At each time point cells adhering to coverslip were incubated for 10 min at 37°C with wheat germ agglutinin (WGA) Alexa Fluor 555 (Life Technologies, W32464) at final concentration of 5 μg/ml in Hank’s balanced salt solution (HBSS) without phenol red. Samples were then fixed in paraformaldehyde 4% in PBS for 20 min at RT and permeabilized in Triton X-100 0,2% in PBS for 15 min at RT. At last samples were incubated with 1 μg/ml of DAPI (Life Technologies, D1306) for 5 min at RT. Imaging was performed on a Leica TCS SP8 X confocal microscope equipped with a White Light Laser and UV lamp and a HCX PL APO CS 63x/1.40 OIL objective. Images were acquired and processed with LAS X software (Leica).
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5

Xenopus oocyte expression of urea transporters

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X.laevis oocytes were prepared and maintained in OR3 medium as described previously (8 (link)). Capped cRNAs were transcribed in vitro from linearized cDNAs with T7 polymerase using the mMESSAGE mMACHINE T7 Ultra Kit (Ambion); cRNAs (2 ng) of UT-A3 alone or with ST6GalI in total volume of 23 nl water were injected into each oocyte. Three days later, healthy oocytes were selected for functional study (8 (link)). Urea flux data are expressed as means ± SDs. Oocyte biotinylation (~15 cells/group) was performed as described (13 (link)). For tunicamycin treatment, at 2 h prior to cRNA injection, oocytes were pre-injected with 10 ng tunicamycin (Sigma).
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6

Tunicamycin-Induced ER Stress Response

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Mice were injected intraperitoneally with 1mg/kg tunicamycin (catalog #T7765; Sigma, St. Louis, Missouri) dissolved in DMSO (vehicle control). tunicamycin is known to cross blood brain barrier [31 (link)] and previous studies have shown that tunicamycin administration (1 mg/kg; IP) induces increases in ER stress markers in mouse brain [32 (link), 33 (link)]. The behavioral effects of ERB-041 are less well characterized than those of other ER subtype agonists, such as propyl pyrazole triol (PPT) and diarylpropionitrile (DPN). The few behavioral studies used 0.9 mg/kg of DPN and PPT; and showed that both drugs enhanced novel object recognition [34 (link)] and object placement [35 (link)]. Given the high affinity and selectivity of ERB-041 for ERβ [36 (link)], we chose 1 mg/kg to use in our study. It is known that ERB-041 reaches maximum brain levels 30 minutes after injection [36 (link)]. Therefore, ERB-041 (catalog #PZ0183; Sigma, St. Louis, Missouri) was administered 30 minutes before tunicamycin injection.
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7

Endoplasmic Reticulum Stress in Adipocytes

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HepG2 cells were cultured in Dulbecco’s Modified Eagle Medium (DMEM low glucose, 1g/L glucose) (Wisent, Toronto, ON, Canada) supplemented with 10% Fetal Bovine Serum (FBS) and 1% Antibiotic/Antimicotic (Wisent). HepG2 cells were seeded in wells 24-48hrs prior to treatments, and treated when cells reached 70% confluence. Medium was removed and replaced with treatments consisting of thapsigargin (25nM, 50nM, 100nM, 200nM) or tunicamycin (2.5ug/ml, 5ug/ml, 10ug/ml, 20ug/ml) (Sigma Aldrich, St. Louis, MO, USA) diluted in medium. 3T3L1 and C3H/10T1/2 adipocytes were maintained in DMEM (4.5g/L glucose) supplemented with fetal bovine serum and differentiated for 10 days following incubation with a differentiation protocol previously described (11 (link)). Differentiation was initiated two days post-confluency in DMEM containing 10% Fetal Bovine Serum in presence of a differentiation cocktail (insulin, Dexamethasone, IBMX) for two days. In the two following days, dexamethasone and IBMX were removed. In the following days, the cells were maintained in DMEM, 10% FBS until full differentiation was achieved (day 8) (11 (link)). Following differentiation, medium was removed and replaced with treatments consisting of thapsigargin (25nM, 50nM, 100nM) or tunicamycin (2.5ug/ml, 5ug/ml, 10ug/ml) (Sigma Aldrich, St. Louis, MO, USA) diluted in medium.
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8

Apoptosis Pathway Analysis in HeLa Cells

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For active Caspase-3 staining, HeLa cells were cultured in 35 mm glass base dishes (Iwaki) and, when indicated, transfected with either empty pBI-CMEF, pBI-CMEF-FLAG-Bcl2l10, pBI-CMEF-FLAG-IRBITS68A or pBI-CMEF-FLAG-IRBITS68A-FLAG-Bcl2l10. 24 hr after transfection, cells were treated with DMSO (1/1000, Sigma-Aldrich) for 24 hr, 1 µM staurosporine (LKT Laboratories) for 4 hr, 2 µM thapsigargin (Calbiochem) for 24 hr or 20 µM tunicamycin (Sigma-Aldrich) for 24 hr and then stained using the Image-iT LIVE Green Caspase-3 and −7 Detection Kit (ThermoFisher Scientific) according to the manufacturer's instructions. Images were acquired with a fluorescence microscope (Biozero BZ-8100, Keyence).
For western blot analysis of apoptosis, cells were transfected, when indicated, with empty pHM6 or pHM6-IRBIT and treated, 24 hr after transfection, with DMSO (1/1000, Sigma-Aldrich) for 24 hr, 1 µM staurosporine (LKT Laboratories) for 4 hr, 2 µM thapsigargin (Calbiochem) for 24 hr or 20 µM tunicamycin (Sigma-Aldrich) for 24 hr. After treatment, cells were lysed in TNE buffer, the protein concentration of each sample was determined using the Bradford assay (Bio-Rad) and equivalent amounts of protein (10 μg) were analyzed by immunoblotting with appropriate antibodies.
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9

Elucidating the ER Stress Response

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Ricin and all viruses were obtained from www.beiresources.org. Cholera toxin (C8052) and tunicamycin (T7765) were purchased from Sigma-Aldrich (St. Louis, MO, USA). C6/36 mosquito cells (CRL-1660), Vero cells (CCL-81) and HeLa cells (CCL-2) were obtained from ATCC (Manassas, VA, USA). Huh-7 cells were provided by Dr. Hongbing Wang. All cells were cultured in complete Dulbecco’s modified Eagle’s medium (DMEM) supplemented with 10% foetal bovine serum (FBS) as growth medium or 2% FBS as maintenance medium. Bortezomib (BTZ), cycloheximide (CHX), and tunicamycin were purchased from Sigma-Aldrich (St. Louis, MO, USA) or Thermo Fisher Scientific (Waltham, MA, USA). The sources of the antibodies are as follows: antibodies against A1AT, HA, actin, Aup1, Derlin2, and Sel1L (Sigma-Aldrich, St. Louis, MO, USA); antibodies against CHOP, PERK, p-PERK, Ire1𝛼, and p-Ire1𝛼 (Cell Signaling, Danvers, MA, USA); antibodies against BiP and VCP (BD Biosciences, San Jose, CA, USA); antibodies against Hrd1 and OS9 (Abcam, Cambridge, MA, USA); antibodies against Ube2j1 and Npl4 (Santa Cruz Biotechnology, Dallas, TX, USA); antibody against Herp1 (OriGene, Rockville, MD, USA); antibody against Fam8A1 (Abgent, San Diego, CA, USA); antibody against Ufd1 (Bethyl, Montgomery, TX, USA); and antibody against Yod1 (Invitrogen, Carlsbad, CA, USA).
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10

Tunicamycin-Induced ER Stress Model

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Cells were incubated with 1 or 5 μM tunicamycin (Sigma-Aldrich, Gillingham, Dorset, UK) in complete media for 2, 6 or 24 h. To obtain ER stress-conditioned medium, tumour cells were cultured in 5 μM tunicamycin or vehicle (100% DMSO) for 2 h. Cells were washed twice with PBS and then incubated in fresh medium for 16 h. Conditioned medium was centrifuged for 10 min at 2,000 g and then passed through a 0.22 μm filter (EMD Millipore, Hertfordshire, UK).
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