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19 protocols using anti parvalbumin

1

Immunohistochemical Analysis of PV+ Interneurons

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To assess the activation of PV+ interneurons in the PrL and IL regions during natural aggression, mice were perfused with saline and 4% paraformaldehyde under deep anesthesia. The brains were fixed overnight at 4°C, and then the fixative was replaced with 30% sucrose solution for dehydration until the brains sank to the bottom of the container. The brains were cut into 30-μm-thick coronal sections with a freezing microtome (CryoStar NX50, Thermo, USA). Sections were washed in PBS three times (5 min each time) and permeabilized with PBS containing 0.5% Triton X-100 at 37°C for 30 min. Then, sections were blocked in 4% goat serum for 2 h at room temperature. The sections were incubated with the primary antibody at 4°C overnight (anti-parvalbumin, 1:500 concentration, Millipore, MAB1572, USA; c-Fos, 1:500 concentration, CST, #2250, USA). After three washes with PBS for 5 min each time, sections were incubated with species-specific fluorophore-conjugated secondary antibodies (Invitrogen A-11029 and A-21428) for 2 h at room temperature. Finally, DAPI was used to counterstain the nuclei after three washes in PBS. Images were acquired to verify virus expression and cell numbers. For c-Fos immunofluorescent staining, a total number of 16 C57Bl/6 mice (n = 4 from each group) were included.
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2

Quantifying ARID1B Expression in Brain

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Immunostaining of brain sections was performed as described previously61 (link),62 (link). The following primary antibodies were used: anti-Parvalbumin (Millipore, Rabbit, AB1572; 1:200), anti-Arid1b (Abcam, Mouse, ab57461; 1:200), anti-VIAAT (PhosphoSolutions, Rabbit, 2100-VGAT, 1:500), anti-VGLUT1 (Millipore, Guinea pig, AB5905, 1:1000), GAD2 (Developmental Studies Hybridoma Bank, Rat, GAD6, 1:200), and anti-Somatostatin (MilliporeSigma, Rat, MAB354; 1:200). 4′,6-diamidino-2-phenylindole (DAPI; Sigma; 1μg/ml) was used for counterstaining. Appropriate secondary antibodies conjugated with Alexa Fluor dyes (Invitrogen) were used to detect primary antibodies. All slides were visualized and imaged under FV3000 (Olympus) fluorescent confocal microscope system. To quantify ARID1B expression levels, we measured the intensity of ARID1B fluorescence in PV or SST positive cells using NIH ImageJ. The expression intensities were averaged and presented after background subtraction and normalization to those of PV or SST negative cells.
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3

Immunolabeling of Wnt1-Derived Cells

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Sections were immunolabeled as previously described (Ellisor et al., 2009 (link)). Sagittal sections from Wnt1-Venus embryos at E8.5, E10.5, and E12.5 were analyzed using an anti-GFP antibody (1:600, Molecular Probes, Cat # A-6455). Adult coronal sections for fate mapping experiments were immunolabeled with an anti-β-galactosidase (β-gal) antibody (1:500, Biogenesis, Cat # 4600-1409 or 1:500, Abcam, Catalog # ab9361-250) to identify Wnt1-derived cells (Ellisor et al., 2009 (link)). In addition, anti-Calretinin (1:5000, Chemicon; Billerica, MA; Catalog # AB1550), anti-Calbindin (1:1000, Swant, Catalog # CB3a), and anti-Parvalbumin (1:1000, Sigma, Catalog # P3088-.2ML) antibodies were used as biomarkers. Secondary antibodies were prepared at 1:500 and include: Alexa 488 (Invitrogen; Cat # A-21206, donkey anti-rabbit IgG; Cat # A-21202, donkey anti-mouse IgG; Cat #A-11055 donkey anti-goat IgG), Dylight 549 (Jackson ImmunoResearch Laboratories; Cat #703-505-155, donkey anti-chicken).
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4

Immunohistochemistry of Adult Mouse Brain

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Adult mouse brains (approximately 8 weeks of age) were harvested, fixed in 4% paraformaldehyde (PFA) overnight, cryoprotected in 30% sucrose and frozen at − 80 °C before further processing. 20 μm-thickness frozen coronal sections were cut using a microtome cryostat system (Leica CM3000). Free floating sections were initially blocked in 5% fetal bovine serum, 1% Triton X-100, 0.5% Tween 20 and 1% skim milk in 0.1 M PBS for 2 h at room temperature to reduce non-specific binding. This was followed by incubation with primary antibodies overnight at 4 °C and secondary antibodies for 2 h in blocking solution at room temperature. The primary antibodies used in this study include: anti-NeuN (1:200, Millipore MAB377, Etobicoke, Canada), anti-Parvalbumin (1:200, Sigma-Aldrich P3088, Oakville, Canada), anti-CDP (M-222) (Cux1) (1:200, Santa Cruz Biotechnology sc-13,024, Dallas, TX, USA), anti-Ctip2 (1:200, Abcam ab28448, Cambridge, MS, USA), anti-Olig2 (1:200, Abcam ab109186), anti-Iba1 (1:500, Wako 019–19,741, Richmond, VA, USA) and anti-GFAP (1:200, Dako Z0334, Glostrup, Denmark). Alexa 488- or 594-conjugated secondary antibodies (1:200; Thermo Fisher Scientific, Burlington, Canada) in blocking solution were used for detection of primary antibodies. Staining of myelin and nuclei was performed with Fluoromyelin green and DAPI (Thermo Fisher Scientific) respectively.
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5

Immunostaining of Cochlear Samples

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After fixation, cochlear samples were blocked with 10% normal donkey serum in 10 mM phosphate-buffered saline (PBS, pH 7.4) with 0.3% Triton X-100 for 1 h at room temperature and then incubated with primary antibody overnight at 4 °C. The next day, the tissues were incubated for 2 h at 4 °C with 488- or 594-conjugated donkey secondary antibody (Invitrogen) and DAPI (Sigma-Aldrich). Omission of primary antibody served as the negative control. The following primary antibodies were used: anti-β-catenin (BD Biosciences), anti-myosin VIIA (Myosin7a) (Proteus Biosciences, Ramona, CA, USA), anti-cleaved caspase-3 (Cell Signaling Technology), anti-Foxo3 (Cell Signaling Technology), anti-Parvalbumin (Sigma-Aldrich), TUNEL (Roche, Indianapolis, IN, USA), and MitoSOX Red (Life Technologies, Rockford, IL, USA). Cochleae were dissected into apical, middle, and basal turns, and images were taken using a Leica SP5 confocal fluorescence microscope (Leica Microsystems, Biberach, Germany).
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6

Stereological and Immunohistochemical Analysis of LGN

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For stereological analysis, 30 μm sections were sampled at 1 mm intervals from the entire LGN and stained with cresyl fast violet. For immunohistochemical procedures, 10 μm sections were sampled at 1.5 mm intervals from the entire LGN. Sections were incubated in the primary antiserum (5G4 anti‐α‐synuclein, Analytik Jena, Jena, Germany, 1:4500; 4G8 anti‐amyloid‐β peptide, Covance, Princeton, NJ, USA, 1:15 000; AT8 anti‐phosphorylated tau, Autogen, Holliston, MA, USA, 1:4000; anti‐GAD65/67, Sigma Aldrich, St. Louis, MO, USA, 1:12 000; anti‐parvalbumin, Sigma Aldrich, 1:8000; anti‐calretinin, Sigma Aldrich, 1:1000; anti‐calbindin, Sigma Aldrich, 1:500; anti‐calbindin, Merck Millipore, Darmstadt, Germany, 1:100). Visualization of antibody binding utilized the Menarini X‐Cell‐Plus HRP Detection Kit (Menarini, Berkshire, UK).
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7

Quantifying Parvalbumin Neurons in Cntnap2 KO Mice

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Adult (P90–120) WT and Cntnap2 KO mice were deeply anesthetized with a mixture of Ketamine/Xylazine and perfused transcardially with saline followed by 4% paraformaldehyde (PFA; Electron Microscopy Science). Brains were post-fixed with PFA 4% and 50 mm thick coronal sections were cut with a VT 1000S vibratome (Leica Microsystems Inc., Buffalo Grove, IL). Primary antibody used: anti-parvalbumin (Sigma-Aldrich; P3088; 1:500) and RFP (Rockland; 600–401-379; 1:1000). Secondary antibody used: Alexa 488 and Alexa 594 (Invitrogen; A11001; A11012; 1:1000). Images were acquired at 1024 pixels resolution using a Nikon confocal microscope. Quantification analysis was performed using NIS-Elements (Nikon software) in fluorescent label sections (50 μm) imaged with 4X objective. All cells that expressed the marker were counted in every sixth coronal section (300 μm apart). To quantify the PV-positive density in the hippocampus, 3 sections for the dorsal hippocampus were analyzed for each animal and the value averaged to calculate a mean cell density (cell/mm2).
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8

Quantifying Parvalbumin Neurons in Cntnap2 KO Mice

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Adult (P90–120) WT and Cntnap2 KO mice were deeply anesthetized with a mixture of Ketamine/Xylazine and perfused transcardially with saline followed by 4% paraformaldehyde (PFA; Electron Microscopy Science). Brains were post-fixed with PFA 4% and 50 mm thick coronal sections were cut with a VT 1000S vibratome (Leica Microsystems Inc., Buffalo Grove, IL). Primary antibody used: anti-parvalbumin (Sigma-Aldrich; P3088; 1:500) and RFP (Rockland; 600–401-379; 1:1000). Secondary antibody used: Alexa 488 and Alexa 594 (Invitrogen; A11001; A11012; 1:1000). Images were acquired at 1024 pixels resolution using a Nikon confocal microscope. Quantification analysis was performed using NIS-Elements (Nikon software) in fluorescent label sections (50 μm) imaged with 4X objective. All cells that expressed the marker were counted in every sixth coronal section (300 μm apart). To quantify the PV-positive density in the hippocampus, 3 sections for the dorsal hippocampus were analyzed for each animal and the value averaged to calculate a mean cell density (cell/mm2).
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9

Parvalbumin and Perineuronal Net Visualization

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Following saline or venlafaxine treatment and euthanasia, hemi brains were fixed overnight in 4% PFA/sucrose at 4° C. Brains were then paraffin-embedded and sectioned at 15 microns. Sections were washed 2–3 times with 1X-PBS, permeabilized with 1X-PBS containing .1% Triton X-100, blocked with 10% normal goat serum, and incubated with anti-parvalbumin (1:500, Sigma, P3088) overnight at 4° C. Following subsequent washes with 1x phosphate buffered saline (PBS) and incubation with a fluorescent secondary antibody for PV immunostaining and fluorescein-labeled Wisteria floribunda lectin (WFA) (1:1000, Vector Laboratories, FL-1351) for 2 hours at room temperature, sections were washed three times with 1X-PBS, counterstained with DAPI and mounted with Hydromount (National Diagnostics, HS-106) and allowed to dry several days at 4° C prior to confocal imaging.
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10

Immunodetection of α-Synuclein Variants

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For α-synuclein detection, mouse monoclonal antibody Syn-1 (BD Biosciences, San Diego, CA, USA) and rabbit polyclonal antibody C-20 (Santa Cruz Biotechnology, Dallas, TX, USA) were used. For specific detection of human α-synuclein, mouse monoclonal antibody Syn211 (Thermo Fisher Scientific, UK) was used, because Syn211 recognizes human α-synuclein, but not mouse α-synuclein [18] (link). Phosphorylated α-synuclein was detected by mouse monoclonal antibody pSyn#64 (Wako Pure Chemical Industries, Japan) or rabbit polyclonal antibody phospho-S129 (Abcam, UK). Glutamic acid decarboxylase (GAD) was detected by rabbit polyclonal antibodies purchased from Sigma-Aldrich (St Louis, MO, USA). Anti-synapsin antibody was produced as previously described [19] . The following antibodies were purchased from these manufacturers: anti-synaptotagmin (Developmental Studies Hybridoma Bank, Iowa city, IA, USA), anti-vesicular glutamate transporter-1 (vGluT-1; Millipore, Billerica, MA, USA), anti-parvalbumin (Sigma-Aldrich), anti-somatostatin (Millipore), and anti-NeuN (Millipore).
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