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9 protocols using ficoll pacque plus

1

Isolation of NK Cells from Healthy Volunteers

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PB-NK cells were harvested from healthy adult volunteers (lab and healthcare workers in the Texas Medical Center), or purchased from the Gulf Coast Regional Blood Center for more extensive experiments. Volunteers are not age or sex matched. Blood was treated with NK Rosette Sep (Stem Cell Technologies) as per manufacturer’s instructions then separated by density centrifugation as described (13 (link)). Cells were washed twice, counted, and either further enriched for NK cells before sorting, sorted directly, or used as controls for flow cytometry or 51Cr release assays. For total PBMC isolation, peripheral blood was immediately diluted 1:1 with phosphate buffered saline (PBS) and layered over Ficoll-Pacque PLUS (GE Healthcare), centrifuged, washed, and counted for use as controls.
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2

HNSCC Cell Lines and PBMC Isolation

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An HNSCC cell line (SCC-9, SCC-15) and 293 T cells were initially purchased from the American Type Culture Collection (ATCC, USA). CAL-27, SCC-25, and Fadu cell lines were obtained from the Peking University School of Stomatology (Beijing, China). The SCC-7 cell line was obtained from the Fudan University (Shanghai, China). The human oral epithelial cell (HOEC) was obtained from the China Center for Type Culture Collection (CCTCC, China). Anonymized human blood samples were purchased from the Blood Transfusion Department of Xijing Hospital (Xian, China), and whole peripheral blood mononuclear cells (PBMCs) were isolated by density-gradient centrifugation using Ficoll Pacque Plus (GE Healthcare, Rydalmere, Australia). We isolated CD8+T cells from PBMCs using CD8 MicroBeads (#130-045-201, Miltenyi Biotec, Gladbach, Germany). CD8+T cells were then stimulated with the T cell Activation/Expansion kit (#130-091-441, Miltenyi Biotec). All cell lines were cultured in RPMI-1640 medium containing 10% fetal bovine serum at 37 °C in 5% CO2.
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3

Capturing Metastatic Prostate Cancer CTCs

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Whole blood was collected from patients with metastatic prostate cancer. The study was approved by the University of Wisconsin Institutional Review Board and patients supplied written informed consent. PBMCs were isolated using a Ficoll-Pacque Plus (GE Healthcare) gradient before undergoing CD45 depletion (MACS, Miltenyi Biotec). The VERSA 13 (link),37 (link),38 (link) platform was used to capture CTCs with an anti-EpCAM antibody (R&D) and stain for extracellular markers EpCAM [VU-1D9] (Phycoerythrin, Abcam), CD45, CD34, and CD11b (AlexaFluor 647, BioLegend).
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4

Isolation and Activation of CD4+ T Cells

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Peripheral blood mononuclear cells were isolated from whole blood using Ficoll-Pacque Plus (GE Healthcare). CD4+ T cells were subsequently enriched using the EasySep human CD4+ T cell isolation kit (StemCell Technologies) and activated using Dynabeads human T activator CD3/CD28 microbeads (Gibco). Activated CD4+ T cells were cultured in RPMI 1640 (HyClone) supplemented with 20% heat-inactivated FBS (HyClone), 2 mM l-glutamine (HyClone), 100 μg/ml Primocin (Invivogen), and 30 U/ml interleukin-2 (provided by Maurice Gately, Hoffmann-La Roche Inc., through the NIH AIDS Reagent Program). Infections were performed 3 days postactivation by spinoculation in the presence of 40 μg/ml Polybrene (Millipore).
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5

Isolation of DCs and PBLs from Peripheral Blood

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Peripheral blood from healthy donors was obtained from buffy coats provided by the Red Cross donor center (Red Cross-Flanders, Mechelen, Belgium), and peripheral blood mononuclear cells (PBMC) were isolated by density gradient centrifugation (Ficoll Pacque PLUS, GE Healthcare, Amsterdam, The Netherlands). The Pan-DC enrichment kit (Miltenyi biotech) was used to isolate DCs from the PBMC. From the remaining PBMC fraction, peripheral blood lymphocytes (PBLs) were depleted from CD14+ monocytes using CD14+ immunomagnetic selection (CD14 Reagent, Miltenyi Biotec, Bergisch Gladbach, Germany), according to the manufacturer’s instructions. The CD14-depleted cell fraction (i.e., peripheral blood lymphocytes (PBLs)) was cryopreserved in FBS supplemented with 10% dimethyl sulfoxide (DMSO, Sigma-Aldrich, Bornem, Belgium) and stored at −80 °C for later use in an allogeneic mixed leukocyte reaction (allo-MLR).
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6

Maternal Biomarkers and Immune Profiles

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Blood samples were collected within 72 h of delivery and at three and six months postpartum. At each collection, 10 mL of maternal blood was collected by venipuncture into EDTA Vacutainers, and plasma was isolated by centrifugation (3000 rpm, room temperature, 10 min). Aliquots were stored at −80 °C for subsequent cytokine analysis in batch assays. Another 10 mL of maternal blood was collected into lithium heparin vacutainers, and peripheral blood mononuclear cells (PBMC) were isolated by density gradient centrifugation using Ficoll® Pacque Plus (GE Healthcare Life Sciences, Mississauga, ON, Canada). The PBMCs were collected and washed with 1X PBS twice. Pellets were re-suspended in 10% DMSO/FBS and stored at −150 °C until immune cell phenotyping in batch assay. Additional maternal blood was collected for C-reactive protein, fasting glucose, HbA1C, LDL, HDL, triglycerides and total cholesterol quantification, and urine was collected for albumin:creatinine ratio by the hospital laboratory.
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7

Isolation of PBMC from Whole Blood

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Standard density gradient centrifugation was used to isolate PBMC from whole blood derived from FSW and control group participants. Briefly, blood was overlaid on Ficoll-pacque Plus (GE Healthcare, Little Chalfont, UK) and centrifuged at 1,200xG without break. Resulting PBMC were removed and washed in 1× PBS. Cells were diluted in trypan blue to exclude dead cells and contaminating red blood cells and then counted.
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8

Isolation of PBMC from Whole Blood

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Standard density gradient centrifugation was used to isolate PBMC from whole blood derived from FSW and control group participants. Briefly, blood was overlaid on Ficoll-pacque Plus (GE Healthcare, Little Chalfont, UK) and centrifuged at 1,200xG without break. Resulting PBMC were removed and washed in 1× PBS. Cells were diluted in trypan blue to exclude dead cells and contaminating red blood cells and then counted.
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9

Monocyte Differentiation from PBMC

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Monocytes were separated from peripheral blood mononuclear cells (PBMC) of healthy blood donors drawn at the Regional Blood Center of the Hungarian National Blood Transfusion Service in accordance with the written approval of the Director of the National Blood Transfusion Service according to the directives of the European Union. PBMC were separated by Ficoll Pacque Plus (GE Healthcare Bio-Sciences AB, Uppsala, Sweden) gradient centrifugation followed by positive selection of CD14 + monocytes by using anti-CD14 coated magnetic beads (Miltenyi Biotec, Bergisch Gladbach, Germany). Monocytes were plated at 2x10 6 cell/ml concentration in RPMI (Hyclone, South Logan, Utah) supplemented by10% FCS (Gibco, Paisley, Scotland) and 1% antibiotic/antimycotic solution (Hyclone, South Logan, Utah) in the presence of 100 ng/ml IL-4 and 75 ng/ml GM-CSF (Peprotech EC, London, UK) added on days 0 and 2.
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