The largest database of trusted experimental protocols

10 protocols using flow cytometry

1

Activation of Dendritic and B Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
Following thawing and recovery of human PBMCs, monocytes were selected by adhering to plastic and then cultured for 8 days in RPMI containing 10% FBS (Gibco), granulocyte-macrophage colony-stimulating factor (100 ng/ml; R&D Systems), and IL-4 (10 ng/ml; R&D Systems). Suspended cells were harvested and confirmed to be DCs by CD11c expression.
B cells were isolated from PBMCs by magnetic selection using CD19 beads (Miltenyi). A total of 1 × 105 DCs or B cells were incubated with different concentrations of C04 with or without goat anti-human Fc antibody (SouthernBiotech) for 48 hours. Up-regulation of the activation marker CD86 was analyzed by flow cytometry (BioLegend). flow cytometry results were analyzed with FlowJo X software. The MFI of cells was plotted against the antibody concentrations using GraphPad Prism software.
+ Open protocol
+ Expand
2

Breast Cancer Cell-PBMC Co-culture and T Cell Proliferation

Check if the same lab product or an alternative is used in the 5 most similar protocols
Human PBMCs were obtained from donors and incubated at ratios of 1:10 and 1:20 with MDA-MB231, MDA-MB468, MDA-MB231-CD73-Flag, MDA-MB468-CD73-Flag, MDA-MB231-TRIM21-Flag, MDA-MB468-TRIM21-Flag, MDA-MB231-shTRIM21, and MDA-MB468-shTRIM21 breast cancer cells separately to construct a coculture system. For the coculture, we seeded breast cancer cells 1 day in advance and then allowed interaction with PBMCs for 3 days. T cells were stimulated with anti-CD3 (30 ng/ml; Miltenyi Biotech), supplemented with or without 2 μM 5′-AMP. After 72 hours, T cell proliferation was measured by prolifer A510 staining using flow cytometry (BioLegend, USA).
+ Open protocol
+ Expand
3

Murine 4T1 Tumor Dissociation and Flow Cytometry

Check if the same lab product or an alternative is used in the 5 most similar protocols
Murine 4T1 tumors were washed with ice-cold phosphate-buffered saline (PBS; pH 7.4), and then dissociated by mincing the tissue with a scalpel, followed by the addition of DMEM containing 1 mg/mL collagenase I + collagenase IV, and incubated for 2 h at 37 °C. The dissociated tumor tissue was then washed with ice-cold PBS and filtered through a 70-μm cell strainer (BD Bioscience, Franklin Lakes, NJ, USA). The cell suspension was then centrifuged at 1500 rpm for 5 min at 4 °C. The resuspended cells were stained with fluorochrome-labeled antibodies targeting murine CD11b-PE-CY7, F4/80-PE (eBioscience, San Diego, CA, USA), and Gr-1-APC (Biolegend, San Diego, CA, USA) or an appropriate isotype control antibody (rat IgG2b kappa isotype control (eB149/10H5) PE-CY7, rat IgG2a kappa isotype control (eBR2a) PE (eBioscience), or rat IgG2b-APC kappa isotype control (Biolegend)), and then analyzed by flow cytometry (Beckman Coulter, Indianapolis, IN, USA).
+ Open protocol
+ Expand
4

Immune Cell Uptake of Labeled Tumor Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
PANC-1 tumour cells were incubated with 1 µM of CFSE reagent overnight. Cells were subsequently washed in PBS and incubated with indicated concentration of chemotherapeutic agents for 24 h. The cells were washed twice and incubated with 1 × 105 MDDC for 4 h. The non-adherent MDDC were stained with an PE-CY5 anti-human HLA-class II antibody and assessed for uptake of CFSE labelled PANC-1 cells by flow cytometry (Biolegend, CA).
+ Open protocol
+ Expand
5

PD-L1 Expression on Tumor Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
Tumor cells were washed with PBS and stained with phycoerythrin (PE)‐conjuncted PD‐L1 antibody (29E.2A3, Biolegend) and then determined with flow cytometry (Beckman Coulter). Data were analyzed using Flow Jo software (Tree Star).
+ Open protocol
+ Expand
6

Cellular ROS and Apoptosis Assessment

Check if the same lab product or an alternative is used in the 5 most similar protocols
For measurement of cellular ROS, cells were incubated CellRox Deep Red (Thermo Fisher Scientific) at a final concentration of 5 μM for 30 min before harvest. Cells were trypsinized, resuspended in DMEM, filtered through a 70 μm strainer and analyzed for fluorescence at 660 nm by flow cytometry. For measurement of apoptosis, cells were trypsinized, resuspended in 100 μL annexin-binding buffer containing 5 μL of Annexin V-647, incubated for 15 min in the dark, filtered through a 70 μm strainer and analyzed immediately by flow cytometry (Biolegend, San Diego, CA).
+ Open protocol
+ Expand
7

Neutrophil Chemotaxis Assay with EOC

Check if the same lab product or an alternative is used in the 5 most similar protocols
We tested neutrophils chemotaxis using a Transwell system (Corning) with 5 mm polycarbonate membranes. PBNs suspended in RPMI-1640 containing 2% foetal bovine serum (1 × 105 cells/100 μL) were added to the upper wells and incubated for 24 h at 37 °C, and 5% CO2. Supernatants from EOC with or without control Ab (1 μg/mL), anti-CXCL1/2/3 (1 μg/mL), anti-CXCL5 (1 μg/mL), anti-IL-8(1 μg/mL), and SB225002 (CXCR2 inhibitor) were added to the lower chamber. Cells in the lower chamber were collected and analysed for CD66b using flow cytometry (Biolegend).
+ Open protocol
+ Expand
8

Analyzing Melanoma Cell Killing and T-Cell Activation

Check if the same lab product or an alternative is used in the 5 most similar protocols
The A-375 (malignant human melanoma) cells that express the NY-ESO-1 antigen were labeled with 1 µM of Incucyte Cytolight Rapid Dyes (4706) and plated in a 96-well plate at the seeding density of 50,000 cells. 2 h after seeding, a caspase-3/7 green apoptosis reagent (2272582; Invitrogen) and IG4 TCR KI or KO controls (50,000 cells per well) were added to A-375 cells. Cell killing was measured by evaluating the number of A375 cells present in each well expressing caspase-3/7 reagent. The co-culture was monitored for growth and apoptosis using the IncuCyte imaging system for 18 h. After co-culturing, CD137 expression on CD8+ T cells was measured by Flow Cytometry (clone 4B4-1; BioLegend).
+ Open protocol
+ Expand
9

Apoptosis and Cell Cycle Analysis

Check if the same lab product or an alternative is used in the 5 most similar protocols
The Annexin V-FITC Apoptosis Detection Kit (Beyotime Biotechnology Ltd., Shanghai, China) was used to determine cell apoptosis. After a 24-h incubation period, the cells were washed with phosphate buffer solution (PBS), digested with trypsin, and centrifuged at 1000 × g for 5 min. Prior to resuspension into 195 μl of annexin V-FITC binding buffer, the transfected cells were rinsed with PBS, centrifuged, and the supernatant was discarded. The cell suspension was supplemented with 5 µl of annexin V-FITC and 10 µl of propidium iodide (PI). Then, the cells were placed in the dark at 20–25 °C for 15 min. The early and late apoptotic cells were detected via flow cytometry (BD Biosciences, Franklin Lakes, NJ, USA).
To determine the cell cycle status, the transfected cells were collected using the experimental steps described above and fixed in 1 ml of 70% ice-cold ethanol at 4 °C for 2 h. After washing the cells with ice-cold PBS, they were centrifuged at 1000 × g for 5 min and resuspended in 425 µl of cell staining buffer, which was supplemented with 50 µl of RNase and 25 µl of PI (all from BioLegend, San Diego, CA, USA). The cell cycle status was analyzed via flow cytometry.
+ Open protocol
+ Expand
10

Investigating HSV-Specific T Cell Activation by Dendritic Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
WT DCs were treated with 50 µM of CoPP, SnPP; 60 µM of CORM-2, iCORM-2, or an equivalent volume of vehicle (NaOH) for 6 h; or transgenic DCs were treated with 1.5 µg/mL of Dox or PBS for 16 h, then infected at an MOI of 3 with HSV-1 KOS or HSV-2 G for 1 h at 37 °C. Then, the supernatants were removed, washed with culture media, and incubated with the corresponding treatments. DCs were collected 6 h later and co-cultured with 1 × 105 HSV-specific T cells/well. T cells, either CD8+ gBT-I or CD4+ gDT-II, were purified from the spleens of transgenic mice using negative-selection kits for T cells (MiltenyiBiotec, Bergisch Gladbach, Germany). Uninfected DCs and DCs pulsed with gD290–302 or gB498–505 peptides were used as controls, as previously described [13 (link)]. T cell activation and differentiation were determined by measuring IL-2 and IFN-γ using ELISA. Additionally, for CD4+ T cells, IL-4 and IL-17 were measured in the supernatants [34 (link)]. Cell viability, CD4, CD8, CD25, and CD71 surface markers were assessed by flow cytometry (BioLegend, San Diego, CA, USA). To further determine CD4+ T cell differentiation, antibodies against the surface expression markers OX40 and PD-1 were used, while antibodies against FoxP3 and RORγt were used for intracellular staining (Biolegend, San Diego, CA, USA), followed by FACS analysis.
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!