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5 protocols using anti cleaved caspase 8

1

Western Blot Analysis of Protein Expression

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Total protein extraction kit (Protease Inhibitor Cocktail) was used for total protein extraction, and BCA Protein Assay Kit (ab102536) was used for total protein quantification. The primary antibodies used are anti-TRAIL (Abcam), anti–E-cadherin (Abcam), anti–caveolin-1 [Cell Signaling Technology (CST)], anti-MET (CST), anti-RAB27A (Affinity), anti–cleaved caspase 3 (CST), anti–cleaved caspase 8 (CST), anti-vimentin (Abcam), anti–cleaved PARP (Abcam). The protein bands were detected with secondary antibodies conjugated to horseradish peroxidase (HRP) and enhanced chemiluminescence. Films were scanned by SuperSignal West Dura Extended Duration Substrate. ImageJ was used to analyze the OD values of the bands. The relative expression of target protein = {target protein (OD value)/internal reference (OD value)} × 10n, and the results were expressed as means ± SD. Glyceraldehyde-3-phosphate dehydrogenase expression was used as a loading control.
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2

Investigating OSCC Cell Line Responses

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OSCC cell lines (HSC-3, HSC-4) were received from the Japanese Collection of Research Bioresources (JCRB) Cell Bank and the Cal-27 and UM1 cell lines were kindly provided by Dr. J. S. Gutkind (National Institute of Dental and Craniofacial Research). The cells were routinely cultured in DMEM supplemented with 10% fetal bovine serum (Invitrogen Life Technologies) at 37 °C in 5% CO2 incubator. Silmitasertib, bafilomycin A1 (BAF1), Z-VAD-FMK were purchased from Selleck. Cisplatin (DDP) was purchased from Sigma-Aldrich. The Cell counting kit-8(CCK8) was purchased from Dojingdo (Kumamoto, Japan). The Annexin V-FITC/PI apoptosis double staining kit was obtained from Keygen Biotech Co. Ltd (Nanjing, China). AF488 Dextran was purchased from Thermo Fisher Scientific. Lyso-tracker Red, Mito-Tracker Red, ER-Tracker Red and Hoechst 33342 were obtained from Beyotime (Shanghai, China). The primary antibodies anti-cleaved Caspase 3, anti-cleaved Caspase 8, anti-ERK, anti-p-ERK, anti-p38, anti-JNKs, anti-p-JNKs, anti-β-actin, and anti-Ki67 were obtained from Abcam (1:1,000). Goat anti-mouse/rabbit secondary antibody was purchased from ZSGB-BIO.
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3

Apoptosis Pathway Protein Analysis

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Protein was extracted via RIPA lysis buffers (Beyotime, China), which was assessed with a bicinchoninic acid protein assay kit (Beyotime). The sample was separated through sodium dodecyl sulfate polyacrylamide gel electrophoresis and transferred onto a PVDF membrane. Then, the membrane was blocked using 5% non-fat milk for 1 h, which was incubated overnight with primary antibodies at 4°C and secondary antibody (1:2,000; Abcam, USA) lasting 1 h at room temperature. The primary antibodies included anti-Bax (1:1,000; Abcam), anti-Bcl2 (1:1,000; Abcam), anti-cleaved-caspase-3 (1:1,000; Abcam), anti-pro-caspase-3 (1:1,000; Abcam), anti-cleaved-caspase-8 (1:1,000; Abcam), anti-pro-caspase-8 (1:1,000; Abcam), anti-cleaved-caspase-9 (1:1,000; Abcam), anti-pro-caspase-9 (1:1,000; Abcam), and anti-GAPDH (1:1,000; Abcam). GAPDH served as a control. Image Lab™ Software (Bio-Rad, China) was used to quantify the intensity of blots.
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4

Left Ventricular Protein Profiling

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Total myocardial protein from the apex of the left ventricle was extracted using protein lysis buffer, and the Lowry method was used to determine the protein concentration. Equal amounts of protein (50 µg) were fractionated by SDS-PAGE (sodium dodecyl sulphate-polyacrylamide gel electrophoresis) and transferred to polyvinylidene fluoride (PVDF) membranes (Millipore, Bedford, Mass, USA). The membranes were blocked for 1 h at room temperature using 5% non-fat milk in Tris-buffered saline supplemented with Tween-20 (TBST) and incubated overnight at 4°C with the following primary antibodies: anti-cleaved caspase-9, anti-cleaved caspase-3, anti-cleaved caspase-8 and anti-glyceraldehyde-3-phosphate dehydrogenase (anti-GAPDH; all obtained from Abcam, Cambridge, Mass, USA). The membranes were washed with TBST and incubated with goat anti-rabbit IgG HL secondary antibodies (1: 10000 Abcam, Cambridge, Mass, USA) at room temperature for 2 h. The immuno-reactive bands were detected by exposing the blots in an Odyssey infrared imaging system (LI-COR). GAPDH was used as the internal control.
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5

Western Blot Analysis of Protein Signaling Pathways

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Proteins were extracted from cell lysates using the Nuclear and Cytoplasmic Protein Extraction Kit (Beyotime, Shanghai, China) and the protein concentration was measured using the Enhanced BCA Protein Assay Kit (Beyotime) according to the manufacturer’s instructions. Heat-denatured proteins were separated by sodium dodecyl sulfate-polyacrylamide gel electrophoresis and then transferred to polyvinylidene fluoride membranes, followed by blocking with 1% bovine serum albumin solution for 1 h. The membranes were then incubated with primary antibodies, including anti-HMGB1 (1:1000; Abcam), anti-TLR4 (1:1000; Abcam), anti-NF-κB p65 (1:1000; Abcam), anti-cleaved caspase-8 (1:1000; Abcam), anti-cleaved caspase-3 (1:1000; Abcam), anti-GAPDH (1:1000; Zhongshan Jinqiao Biotechnology, Beijing, China), and anti-Lamin A (1:1000; Abcam) at 4 °C overnight, followed by incubation with horseradish peroxidase-conjugated goat anti-rabbit or goat anti-mouse immunoglobulin G (1:4000; EarthOx, Millbrae, CA) at room temperature for 30 min. Protein bands were detected using an enhanced chemi-luminescence kit for western blotting (Beyotime) according to the manufacturer’s instructions. GAPDH or Lamin A was used as an internal control. Relative densitometry was calculated using Image J2x analysis software (National Institutes of Health, Bethesda, MD).
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