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4 protocols using n methylmorpholine nmm

1

Functionalized Carbon Nonwoven for Amine Grafting

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A functionalized carbon nonwoven (CF-1c) containing carboxyl groups on the surface was used to incorporate diamine derivative. The carbon nonwoven CF-1c was treated with a solution containing 4-(4,6-dimethoxy-1,3,5-triazin-2-yl)-4-morpholine (DMT/NMM/TosO) [42 ] (0.21 g, 5 mmol) and N-methylmorpholine (NMM) (Sigma-Aldrich, Poznan, Poland) (550 µL, 5 mmol) in DMF (5 mL) as a solvent. The reaction of carboxyl group activation was carried out for 90 min at room temperature. Then the excess reactants were removed, and the nonwoven fabric was washed twice with DCM (5 mL) and treated with ethylenediamine (Sigma-Aldrich, Poznan, Poland) (0.45 mL, 7 mmol) in DCM. The condensation reaction was carried out for 12 h at room temperature. After this time, the nonwoven was washed with DMF (3 × 5 mL) and DCM (3 × 5 mL). The modification product was a nonwoven CF-C6H4-CONH-(CH2)2-NH2 (CF-2) containing free amine groups on the surface.
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2

Peptide Synthesis with Fluorescent Labeling

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Fmoc-protected amino acids, 2-(6-Chloro-1H-benzotriazole-1-yl)-1, -1,3,3-tetramethylaminium hexafluorophosphate (HCTU), trifluoroacetic acid (TFA), and rink amide SS resin, were purchased from Advance ChemTech, Louisville, KY, USA. Nα-Fmoc-Nδ-allyloxycabonyl-L-ornithine (Fmoc-Orn[Aloc]-OH) was purchased from Chem-Impex International, Inc., Wood Dale, IL, USA. 1-Hydroxy-6-(trifluoromethyl) benzotriazole (HOBt) and (Ethyl cyano[hydroxyimino]acetato)-tri-(1-pyrrolidinyl)-phosphonium (PyBOP) were purchased from Novabiochem, Billerica, MA, USA. Dimethylformamide (DMF) was purchased from Protein Technologies, Tucson, AZ, USA. Diisopropylethylamine (DIEA), triisopropylsilane (TIPS), tetrakis(triphenylphosphine) palladium (0) (palladium), 5(6)-carboxyfluorescein (FAM), chloroform (CHCl3), methanol (MeOH), dichloromethane (DCM), and N-methylmorpholine (NMM) were purchased from Sigma-Aldrich, St. Louis, MO, USA. Glacial acetic acid was purchased from Alfa Aesar, Ward Hill, MA, USA. Acetic anhydride was purchased from Fisher Scientific, Fair Lawn, NJ, USA. Commercial peptide ARG (FAM-RRRRRRRRR) was purchased from AnaSpec, Fremont, CA, USA. All the salts used for the preparation of assay buffers were purchased from Sigma Aldrich, St. Louis, MO, USA.
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3

Peptide Synthesis Protocol for Drug Discovery

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All chemicals, reagents, resins, and cell lines were obtained from commercial sources. Fmoc-protected amino acids, 2-(6-chloro-1H-benzotriazole-1-yl)-1,1,3,3-tetramethylaminium hexafluorophosphate (HCTU) and trifluoroacetic acid (TFA) were purchased from Advanced ChemTech, Louisville, KY. Chlorotrityl chloride resin (CTC) was purchased from ChemImpex, Wood Dale, IL. Diisopropylethylamine (DIEA), methanol (MeOH), chloroform, acetic acid, trifluoroethanol (TFE), tetrakis (triphenylphosphine) palladium, N-methyl morpholine (NMM), and 6-carboxyfluorescein (6-FAM) were purchased from Sigma-Aldrich, St. Louis, MO. Dimethylformamide (DMF), dichloromethane (DCM) and triisopropyl silane (TIPS) were purchased from Protein Technologies, Tucson, AZ. (7-Azabenzotriazol-1-yloxy) tripyrrolidinophosphonium hexafluorophosphate (PyAOP), (benzotriazol-1-yloxy) tripyrrolidinophosphonium hexafluorophosphate (PyBOP), and N-hydroxybenzotriazole (HOBT) were purchased from EMD Millipore, Billerica, MA. Cell lines and their respective media were purchased from the American Type Culture Collection (ATCC, Manassas, VA). CellTiter-Glo® reagent was purchased from Promega (Madison, WI).
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4

Synthesis of Triazolyl-Containing MT-II Analogues

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The ω-alkynyl-alcohols
were purchased from Alfa Aesar; Fmoc-l-Trp-(Boc)-OH, Fmoc-d-Phe-OH, and Fmoc-l-Pra-OH amino acids, Fmoc-Rink
amide resin, and HOBt were purchased from Iris Biotech GmbH (Marktredwitz,
Germany); Fmoc-l-Arg(Pbf)-OH and Fmoc-l-His(Trt)-OH
amino acids were purchased from CBL (Patras, Greece); Fmoc-l-Nle was purchased from NeoMPS (Strasbourg, France); TBTU from Advanced
Biotech Italy (Milan, Italy). Peptide-synthesis grade N,N-dimethylformamide (DMF) was purchased from Scharlau
(Barcelona, Spain); acetonitrile from Carlo Erba (Milan, Italy); dichloromethane
(DCM), trifluoroacetic acid (TFA), piperidine, acetic anhydride (Ac2O), and N-methyl morpholine (NMM) were purchased
from Sigma-Aldrich (Milan, Italy). The scavengers for cleavage of
peptides from resin, 1,2-ethanedithiol (EDT), thioanisole, and phenol
(PhOH), were purchased from Acros Organics (Geel, Belgium), Jansenn
Chimica (Beerse, Belgium), and Carlo Erba (Milan, Italy).
The
purity of the final linear precursors (I′–X′)
and the [1,2,3]triazolyl-containing MT-II analogues (I–X) was
established by analytical RP-HPLC and exceeded 95%, their structural
integrity was established by ESI-MS.
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