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5 protocols using pan cytokeratin ae1 ae3

1

Immunohistochemical Analysis of Surgical Biopsy

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At 5 days post-operatively, immunohistochemical processing was conducted with the biopsy samples. The manufacturer’s guidelines were followed for each antibody used, and positive/negative controls were used for each reaction. The antibodies used were alpha-smooth muscle actin (α-SMA) (Dako North America, Carpinteria, CA, USA), for identifying myofibroblasts in the sample’s connective tissue, and pan-cytokeratin AE1/AE3 (Santa Cruz Biotechnology, Dallas, TX, USA), for identifying epithelial cells at the repair site if keratin was present. Reaction amplification was conducted using the EasyLink One kit (EasyPath, São Paulo, SP, Brazil). After mounting, the slides were kept in an oven (40°C) for at least 24 hours before being examined under a light microscope. The histology and immunohistochemistry were analyzed.
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2

Immunostaining of Paraffin Sections

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Serial paraffin sections were de-paraffinized, rehydrated, and blocked in 3% BSA. They were then incubated with primary antibodies overnight at 4 °C. Antibodies used were: CK8/18 (1:200, Fitzgerald, #20R-CP004, Suffolk, England), Synaptophysin (1:100, Sigma/Cell Marque, #336R-95/clone MRQ-40, St. Louis, MO), Insulin (1:100, Cell Signaling Technology, #4590 S, Danvers, MA), Pan-Cytokeratin AE1/AE3 (1:200, Santa Cruz, #sc-81714, Dallas, TX), Nestin (1:100, Abcam #22035, Cambridge, UK). Sections were then incubated with AlexaFluor 594 or 488 secondary antibodies (1:200, Life Technologies, Grand Island, NY) and, DAPI (1:2000) and mounted using prolong gold anti-fade reagent (Life Technologies, Grand Island, NY).
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3

Histological Analysis of Organ Samples

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Tissue samples for histological analysis were taken at the time of sacrifice from liver, spleen, skeletal muscle, heart, gonads, lung and kidney. In order to ensure that all the liver was accurately represented, samples from four liver lobes per animal were collected. Samples were fixed in 4% PFA-sucrose, embedded in paraffin and 7 µm sections were cut. Sections were stained with hematoxylin-eosin (HE) for analysis of liver histology. Histology was assessed in a blinded manner by a hepatopathologist (V.K.) from 4–5 slides/liver and changes were graded according to severity and/or prominence of each change from 0 to 334 (link). The average score for each treatment group ± SEM is shown.
Immunohistochemical staining was done for macrophages (1:200, RAM-11; DAKO), proliferating cells (1:200, Ki-67; DakoCytomation), rabbit T-lymphocytes (1:200; GenWay), Cyr61 (5 µg/ml; Cyr61, Novus Biologicals;), β-galactosidase (1:200; β-gal; Promega) and cytokeratins (1:200, pan-Cytokeratin, AE1/AE3; Santa Cruz Biotechnology). Photomicrographs of the 7 µm histological sections were taken with an Olympus AX70 microscope (Olympus Optical) and analySIS software (Soft Imaging System). Images were further processed for publication with Adobe Photoshop 7.0 (Adobe).
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4

Western Blot Analysis of Signaling Pathways

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The cells were washed twice with cold PBS and then harvested for Western blotting. Cells were lysed in cold radioimmunoprecipitation assay (RIPA) buffer containing protease inhibitors for 30 min. The lysates were then centrifuged and the supernatants collected. Approximately 40 µg of total protein was denatured and separated by 10% SDS-PAGE, and then transferred to a nitrocellulose membrane. The membranes were blocked with 5% non-fat milk in Tris-buffered saline containing 0.1% Tween-20 (TBST) for 2 hours at room temperature. The membranes were then incubated with the following primary antibodies overnight at 4°C: PCNA (Abcam, USA), pan Cytokeratin/AE1/AE3, Vimentin (Santa Cruz Biotechnology, USA), E-cadherin, p-MEK1/2(Ser217/221), MEK1/2, p-ERK1/2(Thr202/204), p-SAPK/JNK(Thr183/Tyr185), SAPK/JNK, p-p38 MAPK(Thr180/Tyr182), p38 MAPK, ERK1/2 (Cell Signaling Technology, USA), MMP2 and MMP9 (Boster Biological Technology, Wuhan, China). P-actin (Santa Cruz Biotechnology) was used as a loading control. The membranes were washed five times with TBST and then incubated with horseradish peroxidase-conjugated secondary antibodies for 1 hour at room temperature. The signals were visualized using an Enhanced Chemiluminescence Detection Kit (Pierce Biotechnology, USA).
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5

Omentum Biopsy and Mesenchymal Cell Isolation

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Omentum biopsies were simultaneously procured from 9 of the 18 rabbits with subcutaneous tubing implantation. Peritoneal cavity was opened to aseptically harvest a 2 × 2 cm biopsy specimen of omentum. The omentum specimen was washed with phosphate buffered saline (PBS) 3 times and trimmed to remove fat and blood vessels as much as possible. Under continuous agitation in 0.125% trypsin/0.01% EDTA (Gibco, Grand Island, NY) at 37°C for 15 mins, MCs were dissociated from the specimens. The isolated MCs were then cultured onto 25 mL culture plates with low glucose Dulbecco's modified Eagle's medium (DMEM) plus 20% fetal bovine serum (FBS) (Gibco, Grand Island, NY). The cells were expanded to a density of 2 × 106 cells/cm2 before seeding. Phenotypic analysis of cultured cells was determined by immunofluorescent staining using antibodies of pancytokeratin AE1/AE3 (Santa Cruz Biotechnology, Dallas, TX) and vimentin (Abcam, Cambridge, UK), respectively.
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