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64 protocols using c fos

1

Protein Expression Analysis Protocol

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In this study, proteins were extracted using a protein extraction kit (Sangon Biotech), and the bicinchoninic acid (BCA) assay (Sangon Biotech) was used to determine the total protein content. After denaturation for 5 min, total proteins were separated by 10% SDS-PAGE and transferred to polyvinylidene fluoride (PVDF) membranes (Millipore, Burlington, MA) via a constant current flow at 200 mA. Subsequently, the PVDF membranes were incubated with Bcl-2 (1:10,000), Bax (1:2000), Caspase-3 (1:5000), M-CSF (1:1000), RANKL (1:3000), OPG (1:3000), p-p65 (1:1000), p65 (1:1000), p-p38 (1:1000), p38 (1:5000), p-JNK (1:1000), JNK (1:1000), p-AKT (1:2000), AKT (1:2000), p-ERK (1:1000), ERK (1:1000), RANK (1:2000), NF-κB (1:1000), NFATc1 (1:10,000), and c-Fos (1:1000) antibodies (Abcam, Cambridge, MA) for 12 h at 4°C. TBS buffer was used to wash the PVDF membranes, and secondary antibodies (Abcam) were added and incubated at room temperature for 1 h. After the membranes were washed three times, chemiluminescent reagents were added, and the grayscale values of the bands were analyzed using ImageJ software. Each experiment was independently repeated 3 times. GAPDH was used to quantify the expression of various proteins.
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2

Western Blotting of Cell Signaling Proteins

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Western blotting was performed using whole cell lysates. Aliquots of total protein (20-50 μg per lane) were electrophoresed on a 10% SDS-polyacrylamide gradient gel and transferred to nitrocellulose membranes (Millipore, Bedford, MA). The membranes were incubated at 4 °C overnight with anti-GAPDH, MYC, c-Jun, p-c-Jun, c-Fos, p-c-Fos, JNK, p-JNK, or Igκ monoclonal antibody (all purchased from Abcam, Cambridge, MA). After rinsing in buffer wash, the membranes were incubated with a horseradish peroxidase-conjugated secondary antibody (Santa Cruz Biotechnology, Dallas, TX) diluted 1:10,000-30,000, followed by development with enhanced chemiluminescence reagents (Amersham, Little Chalfont, UK).
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3

Immunohistochemical Analysis of Signaling Pathways

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Slices were deparaffinized by Xylol, followed by rinse with phosphate-flushing fluid. After microwave-treated antigen retrieval, the samples were cooled below 35°C at room temperature. The slices were then incubated with 3% H2O2 at room temperature for 15 min. After that primary antibodies against P-P38 (1 : 100)/P-JNK (1 : 100)/C-fos (1 : 50)/γ-GCS-h (1 : 100) (Abcam, Cambridge, UK)/P-ERK (1 : 400)/C-jun (1 : 400) (Cell Signaling Technology, Boston, MA) were dripped into the samples and samples were incubated at 4°C for 24 h. After reheating at 37°C for 1 h, the respective secondary antibodies were added for incubation at 37°C. DAB coloring was then performed, and cell nucleus was redyed with Harris hematoxylin. The samples were dehydrated until becoming transparent and were sealed with neutral balsam. The slices were observed under a light microscope. Five different random views of each slice were observed. A semiquantitative analysis on integrated optical density (IOD) was conducted by HIS-IPP (Image Pro Plus 6.0) software.
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4

Audio-Induced Seizure Induction and c-Fos

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After DBA/1 mice were primed for a week, mice that did not exhibit 3 seizures were exposed to the audio tone again the next day, and the response was recorded as a clonic-tonic seizure with respiratory arrest, wild-running seizure, or NR. Mice were then transcardially perfused with 4% PFA 90 min after audio exposure. Perfusion and immunohistochemistry were conducted as previously described in Yan et al., 2021 (link) to stain for c-Fos (Abcam).
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5

Western Blot Analysis of TNC Markers

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The other half of 80 anesthetized rats were transcardially perfused and left medulla oblongata and first cervical cord (TNC) were isolated for Western blot analysis as described previously.20 (link) The membranes were successively incubated with primary antibody against CGRP (rabbit monoclonal antibody, dilution 1:500; Abcam), c-Fos (rabbit polyclonal antibody, dilution 1:500; Abcam), 5-HT2AR (rabbit polyclonal antibody, dilution 1:500; Abcam), GSK-3β (rabbit polyclonal antibody, dilution 1:500; Abcam), GSK-3β (phospho S9, rabbit polyclonal antibody, dilution 1:500; Abcam) and nNOS (rabbit monoclonal antibody, dilution 1:500; Cell signaling technology) overnight and horseradish peroxidase-conjugated goat anti-rabbit IgG (dilution 1:5000; Jackson, PA, USA) for 1 h. GAPDH (rabbit monoclonal antibody, dilution 1:3000; Cell signaling technology) was served as a control. Densitometry was analyzed using Image J software.
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6

Cellular and Synaptic Integrity Profiling

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Mice were sacrificed and perfused (cold 4% paraformaldehyde in 1 x PBS) 1 h later to assess cellular and synaptic integrity by labeling for the neuronal marker NeuN (1:500, Abcam), astrocyte marker GFAP (1:500, Abcam), microglia marker Iba1 (1:500, Abcam), apoptosis marker cleaved caspase‐3 (1:200, Abcam), and neural activity marker – c‐fos (1:300, Abcam). For immunostaining, 30 µm sections were incubated with blocking buffer (10% normal goat serum and 0.1% Triton X‐100 in PBS) for 1 h. Primary antibodies were diluted in blocking buffer and incubated with the sections overnight at 4 °C. Primary antibodies were visualized using the appropriate secondary antibody conjugates (Alexa Fluor 488, Alexa Fluor 594 ThermoFisher Scientific). The samples were then washed, stained with DAPI (Sigma, #10236276001), and mounted onto glass slides. Images were acquired on a Carl Zeiss Axio Observer microscope using 20× air objectives and subsequently analyzed in ImageJ.
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7

Osteoclast Differentiation Pathway

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MDHB was obtained from Selleck (Shanghai, China), dissolved in DMSO and stored at –20°C. Eagle’s minimal essential medium with alpha modification (α-MEM) and penicillin/streptomycin were obtained from Gibco (Carlsbad, USA). Recombinant soluble mouse RANKL and M-CSF were obtained from R&D (Minneapolis, USA). The ROS Production Detection kit was obtained from Beyotime (Shanghai, China). Antibodies against β-actin, p38, JNK, ERK, IκBα, p65, and phosphorylated ERK, JNK, p38, IκBα, p65 were obtained from Cell Signaling Technology (Boston, USA). Antibodies against CTSK, TRAP, c-Fos, Nfatc1, Nrf2, HO-1, GCLC, Nqo-1, ubiquitination (Ub) and GAPDH were obtained from Abcam (Cambridge, UK). Tartrate-resistant acid phosphatase (TRAP) staining kit was purchased from Sigma-Aldrich (St Louis, USA).
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8

Multiprotein Immunofluorescence Analysis

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After dewaxing, antigen retrieval, and blocking, the sections were incubated with primary antibodies against anti-DβH (1:50, Thermo Scientific, Rockford, Illinois, United States), c-fos (1:100, Abcam, Cambridge, UK), occludin (1:150, Abcam, Cambridge, UK), keratin (1:50, Cell Signaling Technology, Massachusetts,United States), and CD31 (1:150, Abcam, Cambridge, UK), α-SMA (1:150, Abcam, Cambridge, UK) antibodies and incubated overnight at 4 °C. Then, the sections were incubated with a fluorescent secondary antibody (1:100) for 2 h. A laser scanning confocal microscope (TCS STED, Leica, Mannheim, Germany) was used to detect positive staining.
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9

FOSL1 Knockdown Modulates Diabetic Progression

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Short hairpin (sh) RNA targeting FOSL1 (sh-FOSL1), sh-negative control (sh-NC), adenovirus vector (Ad)-sh-FOSL1, and Ad-sh-NC were purchased from Sangon Biotech (Shanghai, China). Streptozotocin (STZ) was obtained from Sigma Aldrich (San Luis, MO, USA). The RevertAid H Minus First Strand cDNA Synthesis kit, DyNAmo Flash SYBR Green qPCR kit, and apoptosis detection kit were all purchased from Thermo Fisher Scientific (Waltham, MA, USA). The primary antibodies (FOSL1, p-ERK, ERK, c-fos, c-jun, and GAPDH) and the HRP-conjugated secondary antibody used for western blotting were procured from Abcam (Cambridge, UK).
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10

Bifidobacterium Modulates Retinal Protein Markers

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A western blot analysis was used to measure GAP‐43, GFAP, c‐fos, ERK, and p‐ERK expression in the retinas of the Bifidobacterium‐treated mice. The retinas were collected and lysed. An equal amount of protein was added to 10% SDS‐PAGE gels, electrophoresed, and transferred electrophoretically onto polyvinylidene difluoride membranes. The membrane was blocked with a blocking buffer (Tris‐buffered saline Tween‐20 (TBST), containing 5% nonfat dry milk) for 1 h at room temperature and then incubated overnight with primary antibodies directed against GAP‐43 (Santa Cruz Biotechnology, 1:100), GFAP (Abcam, 1:1000), c‐fos (Abcam, 1:1000), ERK (CST, 1:1000), p‐ERK (CST, 1:1000), and GAPDH (Proteintech, 1:1000). The membranes were washed with TBST for 30 min and then incubated with a secondary antibody (Proteintech, 1:5000) for 1 h at room temperature. Proteins were visualized using a molecular imaging system (Amersham Imager 600, GE Healthcare, Buckinghamshire, UK). The experiments were repeated three times.
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