The largest database of trusted experimental protocols

Anti o glcnac

Manufactured by Cell Signaling Technology
Sourced in Norway, Germany

Anti-O-GlcNAc is a laboratory reagent used to detect and study the post-translational modification of proteins by O-linked N-acetylglucosamine (O-GlcNAc). O-GlcNAc is a dynamic and reversible modification that plays important roles in various cellular processes. Anti-O-GlcNAc is a specific antibody that can be used to identify and quantify O-GlcNAcylated proteins in biological samples.

Automatically generated - may contain errors

9 protocols using anti o glcnac

1

Quantification of O-GlcNAc Proteins

Check if the same lab product or an alternative is used in the 5 most similar protocols
Day 35 symNs in one well of 6-well culture plate (Corning) were prepared for protein lysate collection. SymNs were lysed by lysis solution that contains 1x RIPA buffer (Sigma-Aldrich, R0278), 1 mM PMSF protease inhibitor (Thermo Fisher Scientific, 36978), PhosSTOP phosphatase inhibitor (Sigma-Aldrich, 4906845001) and 10 μM PUGNAc (Sigma, A7229). Bradford reagent (Bio-Rad, 5000006) was used for measuring protein concentration. For western blotting, 20 μg/well of total protein for each sample was prepared and ran in 4–12% pre-cast Bis-Tris gels. Proteins were then transferred to nitrocellulose membrane and blocked with 5% BSA in TBST. The membranes were incubated with Anti-O-GlcNAc (1:1000, Cell Signaling, 82332), Anti- OGT (1:1000, home-made), Anti-OGA (1:1000, home-made), Anti-Milton1 (1:800, Proteintech, 13987-1-AP) Anti-Actin (1,5000, BD Pharmingen, 612656) primary antibodies at 4°C overnight. The next day, the membranes were washed 3 times with PBST and incubated with goat anti-mouse and goat anti- rabbit HRP at room temperature (RT) for 1 h.
+ Open protocol
+ Expand
2

Protein-Protein Interaction Assay

Check if the same lab product or an alternative is used in the 5 most similar protocols
The IP assay was performed as previously described [48 (link)] to assess the interactions between proteins. In detail, Huh-7 cells were collected and lysed in Western/IP lysis buffer (Beyotime, Jiangsu, China) according to the manufacturer’s description. After preclearing with 50 μl of protein A/G-Sepharose (Novex, Oslo, Norway) for 1 hour, the supernatants were incubated overnight at 4 °C with anti-O-GlcNAc (no. 9875, Cell Signaling Technology), anti-ACSL4 antibody (no. ab110007, Abcam) or IgG for crosslinking and then incubated with protein A/G-Sepharose beads and washed with the Western/IP lysis buffer (Beyotime). Then, the beads were subjected to western blotting assay with the indicated antibodies.
+ Open protocol
+ Expand
3

Immunofluorescence Staining of Synaptic Proteins

Check if the same lab product or an alternative is used in the 5 most similar protocols
SymNs were fixed by 4% paraformaldehyde (Sigma) for 20 min and washed twice with 1x PBS. Fixed symNs were permeabilized using 0.3% Triton, 1% BSA and 3% goat or donkey serum in 1x PBS for 20 min. Anti-O-GlcNAc (1:200, Cell Signaling, 82332; 1:200, home-made, CTD110.6 and RL2), Anti-PRPH (1:500, Santa Cruz, SC-377093), Anti-c-Fos (1:200, Santa Cruz, sc-166940), Anti-OGT (1:200, home-made) primary antibodies were added to the cells and incubated overnight at 4°C. The next day, cells were washed twice and incubated with secondary antibodies for 1 h at RT. Images were taken using the Lionheart FX Automated Microscope.
+ Open protocol
+ Expand
4

Quantification of O-GlcNAcylation in Hippocampal Slices

Check if the same lab product or an alternative is used in the 5 most similar protocols
Acute hippocampal slices treated with 1 μM thiamet-G or DMSO vehicle in the recording aCSF for one hour at 37 °C were homogenized in a lysis buffer supplemented with protease and phosphatase inhibitors, and protein concentrations were determined by the Bradford protein assay. Laemmli sample buffer containing SDS was added to the protein samples, and boiled at 95 °C for 5 min. 20 μg proteins were loaded in each well, and separated by a 10% SDS-PAGE gel. The proteins were transferred to a PVDF membrane at 100 V for one hour, and the membrane was subsequently blocked with 5% skim milk in TBST (Tris-buffered saline, with 0.1% Tween 20) for one hour at room temperature. The membrane was then incubated with primary antibodies, anti-O-GlcNAc (Cat#: 9875 S, Cell Signaling, 1:1000) and anti-actin (Cat#: SC-8432, Santa Cruz, 1:1000), overnight at 4 °C. After being thoroughly washed with TBST, the membrane was incubated with a secondary antibody, anti-mouse IgG-HRP (Cat#: SC-2005, Santa Cruz, 1:5000), for one hour at room temperature. Protein bands were visualized and captured with the western chemiluminescent HRP substrate (WBKLS0100, Millipore) using the ImageQuant LAS 4000 system (GE Healthcare).
+ Open protocol
+ Expand
5

Glycan-Specific Antibody Characterization

Check if the same lab product or an alternative is used in the 5 most similar protocols
The following antibodies were used: Anti-Paucimannose (serum-free undiluted cell culture supernatant; clone: Mannitou, gift from B. Schmitz, Bonn, Germany); anti high-mannose (serum-free undiluted cell culture supernatant; clone 492, gift from B. Schmitz, Bonn, Germany); anti-polySia (1:10,000 dilution, clone 735 gift from R.Gerady-Schahn, Hannover Germany, IgG), anti-NCAM (1:1000 dilution clone 5B8 IgG Hybridoma Bank); anti-CML (1:10,000 dilution; clone CML56 abcam); anti-O-GlcNAc (1:10,000 dilution; clone CTD110.6, Cell Signaling); anti-Synapsin-1 (1:5000 dilution; polyclonal 64581 Abcam); anti-RAGE (1:1000 dilution; polyclonal 3611 Abcam).
+ Open protocol
+ Expand
6

Quantifying Protein Modifications by Western Blot

Check if the same lab product or an alternative is used in the 5 most similar protocols
For Western blot analysis, protein samples were separated by SDS/PAGE and transferred on to nitrocellulose membrane (Whatman). The membranes were blocked for 1 h in 5% non-fat milk powder or 5% BSA in TBS-0.2% Tween20 (TBS-T) buffer for 1 h at room temperature with gentle shaking. Then, the following primary antibodies, diluted in blocking buffer, were added to the membranes overnight at 4°C: anti-OGT (DM-17, Sigma–Aldrich), anti-OGT (Abcam ab177941), anti-O-GlcNAc (RL2, Abcam), anti-O-GlcNAc [C-terminal domain (CTD) 110.6, Cell Signaling], anti-TOM20 (F-10, Santa Cruz Biotechnology), anti-ATP synthase β subunit (ATPB, 3D5, Abcam), anti-Timm13 (A01, Abnova), anti-HSP60 (D307, Cell Signaling), anti-α-tubulin (12G10, Developmental Studies Hybridoma Bank, University of Iowa) and anti-α-tubulin (11H10, Cell Signaling). The following fluorescent secondary antibodies, diluted in 1% milk in TBS-T, were added to the membranes for 1 h at room temperature: donkey anti-rabbit 800, donkey anti-mouse 680, goat anti-rabbit 800 and goat anti-mouse 680 (LI-COR). Images were acquired and analysed using the LI-COR Odyssey Image System.
+ Open protocol
+ Expand
7

O-GlcNAc Immunoblotting Workflow

Check if the same lab product or an alternative is used in the 5 most similar protocols
Lys-GFP-ER-HoxA9 cells were treated with ML390, BSQ, or DMSO for 72 hr. Cell lysates were harvested in RIPA buffer supplemented with protease inhibitors and with PUGNAc at a concentration of 10 μM. Total protein was quantified (BioRad) and 50 mg of protein was loaded per lane. Immunoblotting was performed with anti-O-GlcNAc or anti-actin antibodies (Cell Signaling Technology).
+ Open protocol
+ Expand
8

Exploring Inflammatory Signaling Pathways

Check if the same lab product or an alternative is used in the 5 most similar protocols
LPS and CpG were from Invivogen. Pam3Cys was from EMC Microcollections. Nec-1 was from Enzo. GSK-872 and zVAD were from Millipore. S3I-201, cycloheximide, PUGNAc, 13C6-glucose and N-acetylglucosamine (GlcNAc) were from Sigma-Aldrich. Lipofectamine 2000 and the Griess Reagent Kit for nitrite quantification were from Thermo Fisher Scientific. Antibodies for immunoblotting included anti-OGT, anti-O-GlcNAc, anti-mouse p-RIPK1, anti-RIPK1, anti-p-IKKα/β (S176/180), anti-p-IκBα (S32), anti-IκBα, anti-p-p65 (S536), anti-p65, anti-p-ERK1/2 (T202/Y204), anti-ERK1/2, anti-p-JNK (T183/Y185), anti-p-p38 (T180/Y182), anti-p38, anti-p-STAT3, anti-STAT3, anti-Histone H3 (Cell Signaling Technology), anti-JNK1, anti-GFP, HRP-conjugated anti-β-actin (Santa Cruz Biotechnology), HRP-conjugated anti-Flag (Sigma-Aldrich), HRP-conjugated anti-Myc (Roche), anti-IKKα, anti-NOS2, anti-GAPDH (Millipore), anti-RIPK3 (Novus Biologicals), anti-mouse MLKL (Abgent), anti-human p-RIPK3, anti-human p-MLKL, anti-mouse p-MLKL, anti-HMGB1 (Abcam), anti-IL-1α (R&D Systems) and anti-mouse p-RIPK3 (Genentech). Antibody-conjugated agarose for immunoprecipitation included anti-Flag agarose (Sigma-Aldrich), anti-c-Myc agarose (Thermo Scientific), GFP-Trap agarose (Chromotek), and sWGA agarose (Vector Laboratories).
+ Open protocol
+ Expand
9

Antibody Staining for DNA Damage Response

Check if the same lab product or an alternative is used in the 5 most similar protocols
The primary antibodies used in this study are as follows: Anti-O-GlcNAc (Cell signaling, #9875, 1:1000); Anti-Rad51 (Millipore, #PC130, 1:500); Anti-OGT (Santa Cruz, #sc-74547, 1:1000); Anti-OGA (Santa Cruz, #sc-376429, 1:1000); Anti-RAD52 (Santa Cruz, #sc-365341, 1:500); Anti-β-Actin (Sigma-Aldrich, #A2228, 1:2000); Anti-RPA2 (Abcam, #ab2175, 1:200 for end resection assay); Anti-γH2AX (Sigma-Aldrich, clone JBW301, #05–636, 1:200 for end resection assay); Anti-Chk1(Cell signaling, #2360S, 1:1000); Anti-pChk1 (phospho-S345) (Cell signaling, #2341T, 1:1000); Anti-pATM (phospho-S1981) (Abcam, #ab81292, 1:1000); Anti-P53 (Santa Cruz, #sc-126); Anti-P21 (Santa Cruz, #sc-6246); Anti-Human CD4 (Biolegend, PE Anti-Human CD4 antibody, clone OKT4,#317410,1: 50). The Secondary antibodies used in this study are as follows: HRP-conjugated Goat anti-mouse IgG (Abcam, #ab205719, 1:3000). HRP-conjugated Goat anti-rabbit IgG (Abcam, #ab205718, 1:3000). Alexa Fluor 488 goat anti-mouse antibody (Invitrogen, #A-11029, 1:500). Alexa Fluor 488 goat anti-rabbit antibody (Invitrogen, #A-11034, 1:500).
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!