The largest database of trusted experimental protocols

7 protocols using mito id red detection kit

1

Subcellular Localization of OPTN in Cultured Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
Cells (1 × 105) were cultured on glass slides and fixed with 4% paraformaldehyde in phosphate‐buffered saline (PBS) at room temperature (RT) for 30 min, washed three times with PBS containing 0.2% Triton (35501‐15; Nacalai Tesque), and then, blocked with 10% goat serum for 1 h at RT. The cells were incubated with a primary antibody specific for OPTN (diluted at 1:400) for overnight at 4°C, washed three times with PBS, and then, incubated with a mouse‐Alexa Fluor 488‐conjugated secondary antibody (A10684, Life Technologies) for 1 h, RT. Cell nuclei were stained using Hoechst (Hoechst 33342, Invitrogen). Mitochondria were stained using the Mito‐ID Red Detection Kit (Enzo Life Sciences).31 Cells were observed using a fluorescence microscope (Biorevo BZ‐9000, Keyence).
+ Open protocol
+ Expand
2

Immunofluorescence Imaging of 3T3L1 Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
3T3L1 cells were fixed in 4% paraformaldehyde and then incubated in 0.1% Tween + PBS solution for 10 min. The cells were then blocked by PBS containing 1% BSA for 30 min. The cells were incubated with primary antibodies at 4 °C overnight and then with a secondary antibody at room temperature for 1 h in the dark. Next, cells were incubated in concanavalin A for the analysis of the endoplasmic reticulum or MITO-ID Red Detection Kit (Enzo Life Sciences, Inc, Farmingdale, NY) for the analysis of the mitochondria. Finally, the cells were incubated in 10 mg l−1 DAPI for 15 min, and observed using an LSM710 confocal laser microscope (Carl Zeiss, Jena, Germany).
+ Open protocol
+ Expand
3

Apoptosis Signaling Pathway Visualization

Check if the same lab product or an alternative is used in the 5 most similar protocols
The cells were seeded onto two-well chamber slides and transfected for 72 h with TFF3-siRNA and siCtrl. After blocking with 1% BSA in TBS, the cells were incubated overnight at 4 ℃ with primary antibodies, including a rabbit polyclonal anti-TFF3 antibody (Santa Cruz), a rabbit monoclonal anti-cleaved caspase-3 antibody (Cell Signaling Technology), a mouse monoclonal anti-cytochrome c antibody (Santa Cruz) and a goat polyclonal anti-Smac antibody (Santa Cruz). The slides were rinsed with TBS and then incubated for 1 h with anti-rabbit IgG-FITC (Sigma), anti-mouse IgG-FITC (Santa Cruz) and anti-goat IgG-FITC (Santa Cruz). Then, the cell nuclei were stained with Hoechst 33342 (Life Technologies, Carlsbad, CA), and the mitochondria were stained with the Mito-ID Red detection kit (Enzo Life Sciences, Farmingdale, NY). The slides were analyzed by fluorescence microscope (Axio Imager M1, Carl Zeiss, Oberkochen, Germany). Three fields were randomly selected from three independent experiments.
+ Open protocol
+ Expand
4

Mitochondrial Dynamics in Temozolomide and Doxycycline Treatment

Check if the same lab product or an alternative is used in the 5 most similar protocols
The cells were grown on cover slips in 24-well plates at 5000 cells per well and treated with temozolomide (50μM), doxycycline (50μM) or a combination of both drugs for 2 cycles at 72h each. For fluorescence staining of mitochondria the MITO-ID Red Detection Kit (Enzo) was used following manufacturer’s instructions.
+ Open protocol
+ Expand
5

Visualizing Mitochondria and Protein Localization

Check if the same lab product or an alternative is used in the 5 most similar protocols
S. cerevisiae CKY263 cultures were propagated overnight in 5 ml of synthetic complete media (SD-SCAA) lacking uracil, and supplemented with 2% galactose to induce expression of the GFP-tagged protein constructs. ∼106 cells were pelleted and the mitochondria stained with Mito-ID Red detection reagent diluted 1:2500 (Mito-ID Red detection kit - Cat# ENZ-51007-500, Enzo Life Sciences, Ann Arbor, MI) according to manufacturer instructions before being affixed to polylysine-coated slides for visualization (Mazia et al., 1975 (link)). Mitochondria visualization and protein localization were determined by confocal microscopy with an Olympus Fluoview 1000 Spectral Confocal with a 600x objective (Olympus America, Center Valley, PA). Protein expression was detected via green fluorescence (excitation=488 nm, emission=510 nm) while mitochondria were stained to fluoresce red (excitation=559 nm, emission=598 nm). All samples were visualized at similar gain, PMT voltage, and magnification to directly compare fluorescence levels.
+ Open protocol
+ Expand
6

Immunofluorescence Imaging of Parkin Localization

Check if the same lab product or an alternative is used in the 5 most similar protocols
HeLa cells stably expressing untagged Parkin WT, S65A or H302A were plated on glass coverslips and treated as described. Immunofluorescence was performed as described in 33 (link). Briefly, coverslips were washed twice with phosphate-buffered saline (PBS), fixed with 3.7% formaldehyde, 50 mM HEPES pH 7.0 for 10 min, washed twice with and then incubated for 10 min with DMEM, 10 mM HEPES pH 7.4. Cells were permeabilised by incubation with 0.2% Triton X-100 in PBS followed by two washes and blocking for 15 min at RT with PBS supplemented with 1% BSA (PBS/1% BSA). Cells were stained with the primary antibodies as follows: ParkinPhospho-Ser65 (1:500) antibody for 16 h at 4°C and total Parkin antibody (1:1,000) for 1 h at 37°C, followed by anti-mouse or anti-rabbit Alexa Fluor 405- or Alexa Fluor 488-conjugated secondary antibodies (Life Technologies). The mitochondria was stained using MITO-ID® Red detection kit (Enzo Life Sciences) at for 30 min at 37°C.
Immunofluorescently labelled cells were imaged using the Zeiss LSM 700 laser scanning confocal microscope with the Alpha Plan-Apochromat ×100/NA 1.46 objective (optical section thickness 0.7 μm). Parkin-Alexa 405 was excited with the 405 laser, P-Parkin-Alexa 488 was excited with the 488 laser, and Mitochondria MITO-ID® Red was excited with the 555 laser. All labels were excited independently to prevent cross-channel bleed through.
+ Open protocol
+ Expand
7

Fluorescence Microscopy of Hemocyte Cell Cultures

Check if the same lab product or an alternative is used in the 5 most similar protocols
The hemocyte cell cultures were prepared according to Section 2.4. After 24 h of incubation, the cells were fixed in 4% paraformaldehyde (Sigma Aldrich, München, Germany; PFA) in phosphate-buffered saline (PBS) and permeabilized in 0.1% Triton X-100 (Sigma Aldrich, München, Germany) in PBS. Mitochondria were detected with a MITO-ID Red Detection Kit (Enzo Life Sciences, Farmingdale, NY, USA). The cells were incubated for 30 min with Dual Detection Reagent and ActinGreen 488 ReadyProbes Reagent (Invitrogen, Thermofisher, Carlsbad, CA, USA) was used to label the actin fibres. The cell nuclei were stained with Hoechst (Enzo Life Sciences). Fluorescence signals were analysed by fluorescent microscopy using an Axio Vert.A1 fluorescence microscope (Carl Zeiss, Jena, Germany) with Axio Cam ICc 5 (Carl Zeiss, Jena, Germany).
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!