relative covalent binding (%]) to PPARγ via denaturing intact
mass analysis, 5 μM human recombinant PPARγ was incubated
with 5 μM compound (n = 2) at room temperature. Each sample
contained 1% DMSO, including the PPARγ control without compound.
Reactions were stopped after 1 h via the addition of 2 μL of
4% TFA to a 10 μL reaction volume. Samples were measured on
a Waters I Class UPLC coupled to a Waters SYNAPT G2-S quadrupole-TOF
electrospray instrument operated in the ESI+ mode. The Waters I Class
UPLC instrument was equipped with a Waters Mass Prep C4 column, 2.1
× 5 mm. The column temperature was set to 65 °C, and the
flow rate was 100 μL/min. Samples were measured with a gradient
from 20% buffer B to 80% buffer in 1.9 min, with a total run time
of 6 min. Buffer A contained water + 0.1% formic acid, and buffer
B contained MeCN + 0.1% formic acid. The MS settings were as follows: m/z range, 150–2200; scan time,
1 s; acquisition mode, resolution; and acquisition time 5 min.