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6 protocols using pe conjugated anti pd 1

1

PBMC Isolation and Phenotypic Analysis

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Peripheral blood mononuclear cells (PBMCs) were isolated from fresh heparinized blood by Ficoll density gradient centrifugation. For phenotypic analysis, the cells were washed twice and stained for 30 min on ice with mixtures of fluorescence-conjugated surface mAbs or isotype-matched controls, and the cells were then washed twice and resuspended in PBS buffer for flow cytometry analysis. PBMCs were stained with the following antibodies: phycoertthrin-cyanin 5 (PE-Cy5)-conjugated anti-CD3 (eBioscience, San Diego, CA, USA); fluorescein isothiocyanate (FITC)-conjugated anti-CD4, anti-CD8 and anti-CD19 (eBioscience); phycoertthrin-cyanin7 (PE-Cy7)-conjugated anti-CD4 (eBioscience); PE-conjugated anti-PD-1 (eBioscience) and anti-IFN-γ (eBioscience).
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2

Flow Cytometry Analysis of Immune Cells

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Cell suspensions were prepared from spleen, lymph nodes, VAT, or liver of ob/ob mice as previously described (Chang et al., 2015 (link); Xiang et al., 2016 (link)). DC single-cell suspensions were obtained from bone marrow following standard procedures. Cells were stained with antibodies against the following cell surface antigens: fluorescein isothiocyanate (FITC)-conjugated anti-CD86, allophycocyanin (APC)-conjugated anti-CD11c, phycoerythrin (PE)-conjugated anti-MHC-II and PE-conjugated anti-PD-L1 (eBioscience, USA); APC-conjugated anti-Foxp3, FITC-conjugated anti-CD4, PE-conjugated anti-CD25 (eBioscience, USA); APC-conjugated anti-CD3, PE-conjugated anti-PD-1, and PE-conjugated anti-TCRβ (eBioscience, USA). Samples were detected on a BD LSRII flow cytometer or BD C6 (BD Pharmingen), and data were analyzed with Flowjo software, version 10.1.
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3

Multiparametric Flow Cytometry Analysis

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Fluorescently conjugated antibodies were purchased from BD Biosciences, eBioscience, TONBO biosciences, and Bioss for phenotypic analyses. The following panel of mouse anti-human mAbs was used: APC.cy7-conjugated anti-CD3 (BD Biosciences, 557832, SK7) was purchased from BD Biosciences (San Jose, CA, USA), Percp.cy5.5-conjugated anti-CD4 (TONBO biosciences, 65-0048-T100, OKT4) was purchased from TONBO biosciences, Inc. (San Diego, CA, USA), PE-conjugated anti-PD-1 (eBioscience,12-2799-42, eBioJ105) was purchased from eBioscience, Inc. (San Diego, CA, USA), and AF-488-conjugated-anti-AR (Bioss, bs-0118R-AF488) and APC-conjugated-ER (Bioss, bs-0174R-APC) were both purchased from Bioss Antibodies Inc. (Woburn, Massachusetts, USA). Estradiol valerate (Selleckchem, S4757) and dihydrotestosterone (Selleckchem, S3149) were all purchased from Selleckchem (Houston, TX, USA). The PBMCs from healthy donors and lung cancer patients were stained for flow cytometry. The cells were then harvested and stained for flow cytometric analysis. All samples were collected on FACSAria II BD (Mountain View, CA, USA). Data were analyzed using Flow Jo software (Tree Star, San Carlos, CA, USA).
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4

Flow Cytometry Analysis of Immune Cells

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For flow cytometry, the following antibodies for the analysis of human samples were used: FITC-conjugated anti-CD16, PE-conjugated anti-PD-L1, PerCP-conjugated anti- CD45, APC-conjugated anti-CD11b, APC-conjugated anti-CD14, FITC-conjugated anti-CD3, PE-conjugated anti-CD8, PerCP-conjugated anti-CD4 and APC-conjugated anti-PD-1. All human antibodies were purchased from BD Bioscience (San Jose, USA). Antibodies used in the mouse experiments were purchased from eBioscience (San Diego, CA) as follows: FITC-conjugated anti-Gr-1, PE-conjugated anti-PD-L1, PerCP-conjugated anti-CD11b, APC-conjugated anti-CD48, APC-conjugated anti-CD8, FITC-conjugated anti-CD3, PE-conjugated anti-PD-1, and PerCP-conjugated anti-CD4. Data were analysed with FlowJo5.6.7 (Tree star, Inc., Ashland, OR, USA).
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5

Phenotypic Analysis of XABCL-LCL and T-Cells

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Between 2 and 5 × 105 of cells were stained with anti-human antibodies for 20 min at 4°C in the dark with PBS containing 2% FBS. After incubation, cells were washed twice, collected in 200 μl of PBS, and analyzed by flow cytometry.
For the XABCL-LCL phenotype analysis, anti-human antibodies used were PE-conjugated anti-CD19 (BD Pharmingen), PE-conjugated anti-CD20, FITC-conjugated anti-CD21, PE-Cy7-conjugated anti-CD38, APC-conjugated anti-HLA-ABC (BD Pharmingen), PE-conjugated anti-HLA-DR (BD Pharmingen), FITC-conjugated anti-CD80 (ImmunoTools), FITC-conjugated anti-CD86 (ImmunoTools), PE-conjugated anti-PD-1 (eBioscience), and FITC-conjugated anti-PD-L1 (BD Pharmingen). For the T-cell phenotype analysis, the following human antibodies were used: PerCP-conjugated anti-human CD3, PE-conjugated anti-human or FITC-conjugated anti-human CD4, and FITC-conjugated anti-human CD8 or APC-conjugated anti-human CD8 (BD Pharmingen). The flow cytometer used was BD FACS Canto. Analyses were performed by using the FlowJo and FACS Diva software.
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6

Comprehensive Immune Cell Profiling

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Treated PBMCs were harvested, washed three times with PBS, and resuspended with 100 μL PBS. To evaluate the proportion of regulatory T cells (Tregs), fluorescein isothiocyanate (FITC)-conjugated anti-CD4 (eBioscience, San Diego, CA) and PerCP-cyanine-labeled anti-CD25 (eBioscience) were added to single-cell suspensions. After fixation/permeabilization, the cells were stained with phycoerythrin (PE)-conjugated anti-Foxp3 (eBioscience). To measure the ratio of Th1, Th2, Th17 cells, the treated PBMC were incubated with 50 ng/mL phorbol myristate acetate (PMA), 1 μg/mL Ionomycin and 10 μg/mL Brefeldin-A (BFA) for 4 hours. Cell suspensions were stained with surface FITC-conjugated anti-CD3 and PerCP-cyanine-labeled anti-CD4 (eBioscience) for 30 minutes and stained with allophycocyanin (APC)-conjugated anti-IFN-γ, PE-conjugated anti-IL-4, or PE-conjugated anti-IL-17A (eBioscience) for 30 minutes. For surface activation markers, such as CD25, CD38, PD-1, and ICOS, treated PBMCs were stained with APC-conjugated anti-CD25, APC-conjugated anti-CD38, PE-conjugated anti-PD-1, and FITC-conjugated anti-ICOS antibodies (eBioscience). After being washed twice with PBS, samples were processed and analyzed using a flow cytometer.
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