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6 protocols using glun2b

1

Anesthesia and Protein Analysis in Mice

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The ketamine (100 mg/kg)/xylazine (10 mg/kg, i. p.) were used to anesthetize mice. After the mice were decapitated, the hippocampus were rapidly removed and homogenized in a lysis buffer (in mM: Tris-HCl 50, NaCl 150, EDTA 5, NaF 10, sodium orthovanadate 1, phenylmethylsulfonyl fluoride 1, 1% Triton X-100, 0.5% sodium deoxycholate and protease inhibitor cocktail). After that, total proteins (20 μg) were separated by SDS-PAGE and blotted onto a polyvinilidene fluoride (PVDF) membrane. The membranes were incubated in antibodies of phospho-ERK1/2 (1:1,000; CST, USA); phospho-GluR1, phospho-GluR2, phospho-GluN2A and phospho-GluN2B (1:1,000; Abcam, United Kingdom); phospho-Src (1:1,000; Millipore, USA). After visualization, the membranes were treated with stripping buffer (Restore; Pierce) for 15 min, and then incubated with antibodies of ERK1/2 (1:1,000; CST, USA); GluR1, GluR2, GluN2A and GluN2B (1:1,000; Abcam, United Kingdom); Src (1:1,000; Millipore, USA) or β-actin (1:1,000; CST, USA). Ras activation assay was implemented according to the instructions of the company (Cell biolabs). The small GTPase is tested by Western blot using a target-specific antibody included in the kit.
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2

Western Blot Analysis of Neurological Proteins

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Samples (25 μg) were loaded onto a Tris/Gly 8% gel to resolve GAPDH (37 kDa), GluA2 (100 kDa), D1 (48 kDa), and GluN2B (166 kDa), or a 4–20% gradient gel to resolve GAPDH (37 kDa), PKMζ (55 kDa)/PKCζ (70 kDa), TH (58 kDa), and DAT (50 kDa). Gels were transferred to nitrocellulose membranes and were then incubated in blocking solution containing 4% bovine serum albumin (BSA) in Tris Buffered Saline with Tween-20 (TBST; 0.1% Tween-20 in TBS) for 1 h at room temperature. Samples were incubated with the following primary antibodies overnight: GluN2B (1:1000; AbCam, Cambridge, MA), D1 (1:500; AbCam, Cambridge, MA) and with the following primary antibodies for 3 h at room temperature: PKMζ/PCKζ (1:5000; Santa Cruz Biotechnology, Santa Cruz, CA); TH (1:2000; EMD Millipore, Billerica, MA); DAT (1:1000, Santa Cruz Biotechnology; Santa Cruz, CA); GluA2 (1:1000; EMD Millipore, Billerica, MA); and GAPDH: (1:2000, EMD Millipore; Billerica, MA). Blots were rinsed and probed with alkaline-phosphatase coupled secondary antibody and developed with BCIP/NBT substrate (KPL, Gaithersburg, MD). Membranes were scanned for quantification with NIH Image J (Rasband, 2014 ). Refer to Supplementary Figure 1 for representative immunoblots for target proteins with corresponding molecular weight markers.
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3

Neuroinflammation Signaling Pathways

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Complete Freunds adjuvant (CFA), Lipopolysaccharides (LPS), anti-β-actin antibody and Hoechst 33258 were obtained from Sigma (St. Louis, MO, USA). Primary antibody, including, GluN2A, GluN2B, GluA1, GluA2, Iba-1 were purchased from Abcam (Cambridge, UK). All secondary antibodies conjugated with horseradish peroxidase (HRP) were purchased from Santa Cruz Biotechnology (Santa Cruz, CA, USA). Dulbecco’s Modified Eagle’s Medium (DMEM) was purchased from Hyclone (Logan, UT, USA), Neurobasal medium, B27, and glutamine were provided by Invitrogen (Carlsbad, CA, USA). In addition, Pra-C was purchased from Shanghai PureOne Biotechnology (Shanghai, China), and was of 98% pure to meet the standard. All of the chemicals and reagents used were of standard biochemical quality.
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4

Hippocampal Protein Expression Analysis

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Western blotting was performed according to methods established in our laboratory46 (link). Hippocampus was removed and homogenized on ice with RIPA buffer (Bi Yuntian). The samples were separated by SDS-PAGE, transferred onto nitrocellulose membranes and then covered by 5% non-fat milk. After washings by Tween-TBS, the membranes were detected by primary antibodies overnight, and then by secondary antibodies conjugated to IRDyeTM (800CW) for 1 h. The visual blots were acquired from the Odyssey Infrared Imaging System (Licor biosciences, Lincoln, NE, USA). The full length blots are presented in Supplementary Information. The primary antibodies are displayed as follows: CREB (cell signaling, 1:1000), p-CREB (cell signaling, 1:1000), BDNF (SANTA CRUZ, 1:1000), GluN2A (abcam, 1:1000), GluN2B (abcam, 1:1000), GluR1 (Millipore, 1:500), GluR2 (Millipore, 1:500), PSD95 (cell signaling, 1:1000), anti-Synaptotagmin1 (abcam, 1:2000), anti-Synapsin1 (Millipore, 1:1000), PT231 (SAB, 1:500), PP1 (Millipore, 1:200), HT7 (Thermo, 1:500), β-actin (abcam, 1:1000), acetylated H3 (Millipore, 1:1000), acetylated H3K14 (Millipore, 1:1000), acetylated H3K9 (Millipore, 1:1000), Histone 3 (abcam, 1:1000).
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5

Synaptosomal Protein Analysis in Alzheimer's Mice

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Four sets of synaptosome fraction samples from 3-month-old Aβ-GFP Tg and non-Tg mice were prepared as described previously53 (link). Each set was a mixture of 3 individual Aβ-GFP Tg or non-Tg littermate hippocampi (totally 12 mice were used both in Aβ-GFP Tg or non-Tg mice). Proteins were subjected to SDS-PAGE and transferred to PVDF membranes. VAMP-2 (1:5000, Abcam, Cambridge, UK), Munc13-1(1:1000, Synaptic Systems, Gottingen, Germany), syntaxin-1 (1:1000, Merck), synaptophysin (1:2000, Sigma-Aldrich), PSD-95 (1:200, Merck), GluN1 (1:200, Merck), GluN2A (1:500, Merck), GluN2B (1:200, Merck), GluA2 (1:200, Merck), neuroligin 1(1:500, Synaptic Systems), and actin (1:2000, Merck) antibodies were used to probe the corresponding proteins and ECL was used for detection (Immunostar Zeta and Immunostar LD, FUJIFILM Wako Pure Chemical Corporation).
Immunoblotting of homogenates of individual Aβ-GFP Tg and non-Tg mouse hippocampi was performed using 6E10, GFP (1:200), GluN2B (n = 5 each for statistical analyses), tau (n = 8 each for statistical analyses, phospho T231, 1:1000, Abcam), and actin antibodies.
Immunoblot results were quantified via a C-Digit blot scanner (LI-COR Biosciences, NE, USA) and normalized with actin or GAPDH (supplementary Fig. S7) and the expression ratios of Aβ-GFP Tg were calculated with the values of non-Tg mice as 1.
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6

Wnt5a-Induced GluN2B Immunostaining

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Transfected neurons were treated at DIV10 with rWnt5a for 1 h and then washed thrice with PBS Ca2+/Mg2+ (100 µM/1 mM), fixed with a freshly prepared solution of 4% PFA-sucrose in PBS for 20 min and permeabilized for 5 min with 0.2% Triton X-100 in PBS. Neurons were incubated with primary antibody (GluN2B Abcam, 1:700) overnight at 4 °C in a wet chamber. Secondary antibody coupled to 555 nm fluorophore was applied at a 1:500 dilution for 30 min at 37 °C.
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