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14 protocols using sw480 cell line

1

Culturing Cancer Cells for Research

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The experiments with cancer cells were performed using a SW480 cell line purchased from ATCC (LGC Standards Sp. z.o.o., Lomianki, Poland). The cells were cultured in DMEM (Dulbecco’s modified Eagle’s Medium) with added 10% FBS (fetal bovine serum, Gibco, Rockville, MD, USA) and were maintained in a humidified air atmosphere containing 5% CO2 at 37 °C (Shel Lab Model 2123-TC CO2 Incubator Cornelius, OR, USA). Every 3 days, the cells were further subcultured. The cells remaining after the experiments were handled according to safety protocols.
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2

Culturing Primary HCEC-1CTs and SW480 Cells

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Primary HCEC-1CTs were a generous gift from Dr Jerry W. Shay and were cultured as described previously.75 The SW480 cell line was obtained from ATCC (Manassas, VA) and cultured in Dulbecco’s modified Eagle medium (Gibco), supplemented with 10% fetal bovine serum (Biochrom, Cambridge, UK). Cell lines were maintained in culture with regular passaging every 2–3 days. Cells were tested for Mycoplasma every 6 months (Mycoplasma detection kit; Lonza, Basel, Switzerland). The cytokine IL6 (Preprotech, Rocky Hill, NJ) and the ligand Jagged1 (Abcam, Cambridge, UK) were used.
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3

Antibody Validation and Cell Line Characterization

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Anti-phospho-p38 (Cat No. 9211), anti-phospho-p65 (Cat No. 3033), anti-p38 (Cat No. 9212), anti-p65 (Cat No. 8242), anti-S100A8 (Cat No. 9212), anti-CD8 (Cat No. 98941), anti-Cleaved-Caspase-3 (Cat No. 9661) antibodies, were purchased from Cell Signaling Technology (Danvers, MA, USA). Anti-TLR4 antibody (Cat No. ab13556), anti-Ki-67 (Cat No. ab16667) were purchased from Abcam (Cambridge, UK). Anti-S100A8 antibody were generated in our laboratory as described previously [8 (link)]. The purity of recombinant proteins was above 98% as judged by SDS-PAGE analysis. Endotoxin levels of recombinant proteins determined by LAL test (WAKO Chemicals, Japan) were <0.02 EU/µg. SW480 cell line was purchased from ATCC (Manassas, VA, USA), LLC cell line was purchased from RIKEN BioResource Research Center (Ibaraki, Japan) and MC38 cell line was kindly provided by Dr. Nicolas P. Restifo (NIH, Bethesda, MD). All cell lines were checked every two months, and found to be mycoplasma free.
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4

Cell Line Cultivation and Adenovirus Transduction

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The hepatic cancer Huh-7 cell line, the pancreatic cancer Panc-1 cell line and the colorectal cancer SW480 cell line were purchased from the American Type Culture Collection. Huh-7, Panc-1 and SW480 cells were cultured in DMEM, RPMI-1640 and Leibovitz L-15 medium with 10% FCS, respectively. The construction, purification and infection of replication-deficient recombinant adenoviruses containing p53 (Ad-p53) or the bacterial lacZ gene (Ad-LacZ) have been described previously [11 (link)].
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5

Protein Expression and Purification

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Luria broth was purchased from Amresco. 15NH4Cl and D2O were purchased from Cambridge Isotope Laboratories. Tranilast was purchased from Sigma. The SW-480 cell line was obtained from the American Type Culture Collection (CCL-288). The cDNA of S100A12 and the RAGE V domain were purchased from Mission Biotech Company using vectors pET21b for S100A12 and pET-32b (+) for the RAGE V domain. The genes were subcloned into Escherichia coli BL21 (DE3) (Novagen). The details of the purification process for obtaining the pure S100A12 and the RAGE V domain proteins are given in the Supporting Information. The cell proliferation reagent WST-1 (4-[3-(4-iodophenyl)-2-(4-nitrophenyl)-2H-5-tetrazolio]-1,3-benzene disulfonate) was purchased from Roche. FPS-ZM1, an inhibitor of the RAGE V domain, was purchased from Calbiochem [46 (link)].
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6

Culturing Colon Cancer Cell Lines

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Normal human colon epithelial NCM460 cells, human colon adenocarcinoma SW480 cell line and human colon carcinoma HCT116 cells were purchased from the American Type Culture Collection. The cells were grown in DMEM (Invitrogen; Thermo Fisher Scientific, Inc.) supplemented with 10% FBS (Invitrogen; Thermo Fisher Scientific, Inc.) and 50 U/ml penicillin-streptomycin (Invitrogen; Thermo Fisher Scientific, Inc.) in a 5% CO2 humidified atmosphere at 37˚C.
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7

Colon Cancer Cell Lines and Treatments

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Human colon adenocarcinoma derived Caco2 cell line (well-differentiated) (G1–2) (from adenocarcinoma) and SW480 cell line (poorly-differentiated) (G3–4) (from adenocarcinoma grades III–IV) were purchased from the American Type Culture Collection (ATCC) Cell Bank (Manassas, Virginia). Cells were grown in Roswell Park Memorial Institute (RPMI) 1640 medium for Caco2 cells and Dulbecco’s Modified Eagle Medium (DMEM) for SW480 cells, supplemented with 10% fetal bovine serum (FBS), 2 mM glutamine, 100 U/mL penicillin, and 100 μg/mL streptomycin, in monolayer cultures, and incubated at 37 °C in a humidified atmosphere containing 5% CO2 in air. The cells were allowed to grow for the established time and then harvested. For the experimental group, Autumn Royal and Egnatia GSEs were added to the medium at increasing concentrations, and the control group received no treatment; the cells were then incubated at 37 °C in a humidified 5% CO2 incubator for the times required by the experiments indicated below.
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8

Colorectal Cancer SW480 Cell Line Protocol

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Human colorectal cancer SW480 cell line was obtained from American Type Culture Collection (ATCC, Rockville, MD, USA) which prior to distribution were tested and authenticated by supplier using identifiler® STR genotyping. Cells were cultured and stored according to the supplier’s instructions and used between passages 5–10. Once resuscitated, cell lines were cultured in RPMI supplemented with 10% FBS, 100U/ml penicillin and 100mg/ml streptomycin at 37ºC in humidified air with 5% CO2 never passaged over a period exceeding 2 months to ensure authenticity. Diallyl disulfide (>80% purity by high-performance liquid chromatography ~10–20% Diallyl sulfide) and LY294002 (Cell Signaling Technology, Danvers, MA) was used in cell culture experiments.
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9

R8-RGD Peptides for Cell Transfection

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R8-RGD peptides with a terminal cysteine modification [Cys-RRRRRRRR-c(RGDfK)] were purchased from Chinapeptides Co. Ltd. (Shanghai, China). PEI 25K was purchased from Sigma-aldrich and PEI 1.8K was purchased from Alfa Aesar. YOYO-1, Lyso-Tracker red, Hoechst 33342, Lipofectamine 2000 and Lipofectamine 3000 were purchased from Invitrogen (USA). pUNO1-hTRAILa (hTRAIL) and pUNO1-MCS (MCS) plasmid were obtained from In vivo Gen (San Diego, CA, USA) and purified with QIAGEN Plasmid Mega Kit (Qiagen GmbH, Hilden, Germany). Annexin V-FITC /PI apoptosis detection kit was purchased from Nanjing KeyGen Biotech. Co., Ltd (Nanjing,China). Antibodies used for western blotting were purchased from Cell Signaling Technology (CST, Beverly, MA, USA).
SW 480 cell line was obtained from American Type Culture Collection (ATCC, USA) and cultured in DMEM with 10% fetal bovine serum (Gibco), 100 units/mL penicillin G sodium and 100 μg/mL streptomycin sulfate and maintained at 37 °C in a humidified and 5% CO2 incubator.
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10

Culturing Colorectal Cancer Cell Lines

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SW480 cell line was obtained from the American Type Culture Collection (ATCC, Manassas, VA, USA). SW620 and its metastatic derivative SW620-LiM2 were obtained from Dr. Roger Gomis at IRB Barcelona [12 (link)], both lines were authenticated and KRAS mutation confirmed. NCM460 cell line [15 (link)] was a kind gift from Dr. Mary Pat Moyer (INCELL, San Antonio, TX, USA). All cells were grown in DMEM with 12.5 mM glucose, 4 mM glutamine, 5% Fetal Bovine Serum (10270, Gibco, ThermoFisher Scientific, Waltham, MA, USA) and 1% Streptomycin/penicillin at 37 °C in a 5% CO2 atmosphere. Cell volume was determined using a ScepterTM Handheld Automated Cell Counter (Merk Millipore, Burlington, MA, USA).
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